FFCP PHASE1:Mm9::chr17:33774745..33774757,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=378460|HGNC=|MCL_coexpression_id=3|UniProt=Q6BCL1|association_with_transcript=-243bp_to_ENSMUST00000052079,NM_001002842,uc008bzb.2_5end|description=CAGE_peak_3_at_Pram1_5end|id=chr17:33774745..33774757,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,1.54e-10,9|ontology_enrichment_disease=DOID:0060100!2.75e-10!3;DOID:4045!2.75e-10!3|ontology_enrichment_disease_v019_2=DOID:0060100,3.62e-30,3;DOID:4045,3.62e-30,3;DOID:0050686,1.79e-15,6|ontology_enrichment_uberon=UBERON:0002106!9.03e-08!6;UBERON:0004457!9.03e-08!6;UBERON:0000042!9.03e-08!6;UBERON:0004854!9.03e-08!6;UBERON:0009034!9.03e-08!6;UBERON:0002095!9.03e-08!6;UBERON:0004782!9.03e-08!6;UBERON:0003281!9.03e-08!6;UBERON:0009664!9.03e-08!6;UBERON:0002296!9.03e-08!6;UBERON:0005602!9.03e-08!6;UBERON:0001179!9.03e-08!6;UBERON:0006293!9.03e-08!6;UBERON:0000981!4.12e-07!4;UBERON:0002495!4.12e-07!4;UBERON:0003608!4.12e-07!4;UBERON:0003826!4.12e-07!4;UBERON:0008202!4.12e-07!4;UBERON:0004375!4.12e-07!4;UBERON:0002428!4.12e-07!4;UBERON:0003464!4.12e-07!4;UBERON:0003606!4.12e-07!4;UBERON:0009749!4.12e-07!4;UBERON:0003860!4.12e-07!4;UBERON:0005856!4.12e-07!4;UBERON:0005866!4.12e-07!4;UBERON:0007828!4.12e-07!4;UBERON:0005254!4.12e-07!4;UBERON:0001271!4.12e-07!4;UBERON:0002091!4.12e-07!4;UBERON:0001464!4.12e-07!4;UBERON:0003285!4.12e-07!4;UBERON:0010129!4.12e-07!4;UBERON:0006234!4.12e-07!4;UBERON:0003887!5.74e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.54e-10,9;UBERON:0002036,1.54e-10,9;UBERON:0002385,1.54e-10,9;UBERON:0000486,1.54e-10,9;UBERON:0007503,1.54e-10,9;UBERON:0001015,1.54e-10,9;UBERON:0002329,1.54e-10,9;UBERON:0003082,1.54e-10,9;UBERON:0003059,1.54e-10,9;UBERON:0007282,1.54e-10,9;UBERON:0004290,1.54e-10,9;UBERON:0009618,1.54e-10,9;UBERON:0000383,1.51e-09,10;UBERON:0007524,9.84e-09,11;UBERON:0003077,9.84e-09,11;UBERON:0007285,9.84e-09,11;UBERON:0002204,9.35e-08,32|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09868563438444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.1056180875885,32.0347491254758,48.1641844455894,74.1171674919078,47.1301384621327,43.2104214197727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0,3.5384422077995,0,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0.241177159752417,0.25462585178142,0.863088412352432,0.972811360650212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0.412773735926445,1.11116716421827,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0.441182838239031,0|short_description=p3@Pram1}} | ||
|EntrezGene=378460 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q6BCL1 | |||
|association_with_transcript=-243bp_to_ENSMUST00000052079,NM_001002842,uc008bzb.2_5end | |||
|description=CAGE_peak_3_at_Pram1_5end | |||
|id=chr17:33774745..33774757,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.54e-10,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.75e-10!3;DOID:4045!2.75e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.62e-30,3;DOID:4045,3.62e-30,3;DOID:0050686,1.79e-15,6 | |||
|ontology_enrichment_uberon=UBERON:0002106!9.03e-08!6;UBERON:0004457!9.03e-08!6;UBERON:0000042!9.03e-08!6;UBERON:0004854!9.03e-08!6;UBERON:0009034!9.03e-08!6;UBERON:0002095!9.03e-08!6;UBERON:0004782!9.03e-08!6;UBERON:0003281!9.03e-08!6;UBERON:0009664!9.03e-08!6;UBERON:0002296!9.03e-08!6;UBERON:0005602!9.03e-08!6;UBERON:0001179!9.03e-08!6;UBERON:0006293!9.03e-08!6;UBERON:0000981!4.12e-07!4;UBERON:0002495!4.12e-07!4;UBERON:0003608!4.12e-07!4;UBERON:0003826!4.12e-07!4;UBERON:0008202!4.12e-07!4;UBERON:0004375!4.12e-07!4;UBERON:0002428!4.12e-07!4;UBERON:0003464!4.12e-07!4;UBERON:0003606!4.12e-07!4;UBERON:0009749!4.12e-07!4;UBERON:0003860!4.12e-07!4;UBERON:0005856!4.12e-07!4;UBERON:0005866!4.12e-07!4;UBERON:0007828!4.12e-07!4;UBERON:0005254!4.12e-07!4;UBERON:0001271!4.12e-07!4;UBERON:0002091!4.12e-07!4;UBERON:0001464!4.12e-07!4;UBERON:0003285!4.12e-07!4;UBERON:0010129!4.12e-07!4;UBERON:0006234!4.12e-07!4;UBERON:0003887!5.74e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.54e-10,9;UBERON:0002036,1.54e-10,9;UBERON:0002385,1.54e-10,9;UBERON:0000486,1.54e-10,9;UBERON:0007503,1.54e-10,9;UBERON:0001015,1.54e-10,9;UBERON:0002329,1.54e-10,9;UBERON:0003082,1.54e-10,9;UBERON:0003059,1.54e-10,9;UBERON:0007282,1.54e-10,9;UBERON:0004290,1.54e-10,9;UBERON:0009618,1.54e-10,9;UBERON:0000383,1.51e-09,10;UBERON:0007524,9.84e-09,11;UBERON:0003077,9.84e-09,11;UBERON:0007285,9.84e-09,11;UBERON:0002204,9.35e-08,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09868563438444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.1056180875885,32.0347491254758,48.1641844455894,74.1171674919078,47.1301384621327,43.2104214197727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0,3.5384422077995,0,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0.241177159752417,0.25462585178142,0.863088412352432,0.972811360650212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.318909537314974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0.412773735926445,1.11116716421827,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0.441182838239031,0 | |||
|short_description=p3@Pram1 | |||
}} |
Revision as of 14:08, 13 September 2013
Short description: | p3@Pram1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pram1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -243bp_to_ENSMUST00000052079, NM_001002842, uc008bzb.2_5end |
EntrezGene: | Pram1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.54e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.54e-10 | 9 |
striated muscle tissue | 1.54e-10 | 9 |
muscle tissue | 1.54e-10 | 9 |
multilaminar epithelium | 1.54e-10 | 9 |
epithelial vesicle | 1.54e-10 | 9 |
musculature | 1.54e-10 | 9 |
somite | 1.54e-10 | 9 |
myotome | 1.54e-10 | 9 |
presomitic mesoderm | 1.54e-10 | 9 |
presumptive segmental plate | 1.54e-10 | 9 |
dermomyotome | 1.54e-10 | 9 |
trunk paraxial mesoderm | 1.54e-10 | 9 |
musculature of body | 1.51e-09 | 10 |
dense mesenchyme tissue | 9.84e-09 | 11 |
paraxial mesoderm | 9.84e-09 | 11 |
presumptive paraxial mesoderm | 9.84e-09 | 11 |
musculoskeletal system | 9.35e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.62e-30 | 3 |
muscle cancer | 3.62e-30 | 3 |
organ system cancer | 1.79e-15 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.