FFCP PHASE1:Mm9::chr5:100407933..100407985,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11991|HGNC=|MCL_coexpression_id=561|UniProt=Q60668,G5E8G0,G3X9W0,E9Q5B6|association_with_transcript=0bp_to_ENSMUST00000019128,ENSMUST00000072750,ENSMUST00000112939,ENSMUST00000171786,ENSMUST00000172361,NM_001077265,NM_001077266,NM_001077267,NM_007516,uc008ygt.1,uc008ygu.1,uc008ygv.1,uc008ygw.1_5end|description=CAGE_peak_1_at_Hnrnpd_5end|id=chr5:100407933..100407985,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.93e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000153,8.17e-08,43;UBERON:0004177,1.93e-07,29;UBERON:0005057,1.93e-07,29|phase1_expression=167.515694071614,62.1176225598063,54.1449094873548,77.7333023058553,66.6191320828642,90.6548068324205,109.797941079897,90.515449732545,205.551534341433,196.614202110475,249.807015641012,248.490275270473,115.731693433495,127.196685519641,188.540125187665,178.178235303047,228.756734147904,115.143690355757,113.804979892763,76.8145269754435,81.0462555139695,174.156328406353,128.771496045495,119.034362558295,120.898691122399,47.6612530215467,61.1682034545886,79.7243560937789,114.014051673824,117.698070597888,125.721199541558,106.685153141218,99.0254308011158,142.633512913895,114.385241421505,111.709681680907,102.288847487447,128.489210636231,135.171014602617,167.004074327642,92.3523436208692,107.238141138476,126.718202141131,56.0240839991319,60.0151432819526,84.7985994986969,93.1045699774167,97.2392197456792,61.0727588001832,47.2464654750509,81.472097385961,76.1888591134349,214.258387935729,171.185465514677,192.245653109489,75.8915336306044,58.1662883075676,53.629897596854,275.352703229913,240.690895568775,192.684746665878,98.9426033641866,78.2579420577803,81.4409244139666,87.0202399058937,71.04801149461,94.0744347027791,132.555315335936,314.905352580847,314.293824436176,332.734088857886,115.68864868354,112.863824426275,324.355636321198,304.3093704829,204.066570627425,96.9019752794621,126.02740269008,124.267685404301,252.562241003321,210.696043216349,281.29322010065,94.9222196604695,114.803572446463,112.765106859286,127.574177510098,167.713839981343,190.686633079283,115.936801993105,111.845908958043,50.7262855227936,33.5565312022741,84.3164453797611,43.1762553310254,46.1341256387845,51.9711189032909,90.1653177245847,115.551758707923,130.41257431064,113.068663843309,143.378601332661,65.4465034813021,140.142881838655,184.877342819866,75.9883553949361,76.2613195080047,90.4888756576462,99.4541592353012,151.737599817243,79.1196601215516,217.030143784436,152.232739156071,140.906068823452,116.207155866072,157.451278854709,86.9612812001354,94.6756726422652,84.0122263704687,216.729585227719,188.943680738574,187.936132209795,175.52484163495,96.9237158334235,153.709918431062,124.830237260819,115.9775030647,165.9439474407,168.572667409148,204.583065587634,128.070996691123,134.962677831495,237.738034197539,114.202578366326,110.469077566703,142.750386612418,113.893366673566,240.340898686746,151.652097173703,52.3136109957707,89.8586724635244,332.197490883783,273.123700066966,298.723073347074,239.469955540951,248.197148904044,262.505012863657,227.132980332783,111.501152788516,499.03990363953,369.324174567751,295.245986347106,255.143832545697,217.989043392869,198.155482751113,182.11719072103,247.200559388569,174.148870453682,180.65823079453,229.888271011034,211.268287986212,209.197245503138,200.048950283188,197.918598949236,180.629564744117,194.376562238097,173.935390673305,168.207422677561,143.037544399783,178.053757606386,118.857243993265,87.7975207381618,80.7023930587834,97.6998013045175,73.9477367369648,119.23440083586,234.41670700001,73.0225510394194,135.398690131735,364.72290841525,310.500430277406,262.24528379046,201.683524623343,179.9038374705,142.478993958307,110.090742278327,157.781598625602,150.298454862561,162.348481185579,147.002921687817,124.935897802937,115.417718633087,140.593738917583,288.105541547731,300.473588163587,312.200427814433,264.543074871063,213.347735884388,214.124658125143,135.326189445911,109.526729800865,93.8852392491421,91.1905041382106,67.8876516029571,287.307272043114,255.133575656937,239.0284254651,245.663607001477,197.041739517725,175.182586025617,167.726848133823,185.15842897709,164.462286499661,297.600187511624,159.276325602119,130.431747361886,94.4645003522198,89.1605145203904,94.55893018722,113.992718332795,279.310340949695,359.826667983993,305.201664223788,273.179449007816,218.093147189244,154.966410216795,154.936116399092,187.112916054049,186.030339304971,148.133480082806,102.250708382621,108.791538575514,117.021088392443,129.680504187774,68.5321161611574,87.5340405973885,101.544722640142,103.715681132114,105.842152992759,193.443235544477,83.0629350502387,163.748765877037,151.880671531392,193.019364368588,180.899380050082,178.238939265915,179.753597050909,166.377198388382,164.83230386198,168.392593405219,154.555553198889,121.074892682653,231.129153560097,228.367517013714,102.281476242972,88.939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| ||
|EntrezGene=11991 | |||
|HGNC= | |||
|MCL_coexpression_id=561 | |||
|UniProt=Q60668,G5E8G0,G3X9W0,E9Q5B6 | |||
|association_with_transcript=0bp_to_ENSMUST00000019128,ENSMUST00000072750,ENSMUST00000112939,ENSMUST00000171786,ENSMUST00000172361,NM_001077265,NM_001077266,NM_001077267,NM_007516,uc008ygt.1,uc008ygu.1,uc008ygv.1,uc008ygw.1_5end | |||
|description=CAGE_peak_1_at_Hnrnpd_5end | |||
|id=chr5:100407933..100407985,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.93e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,8.17e-08,43;UBERON:0004177,1.93e-07,29;UBERON:0005057,1.93e-07,29 | |||
|phase1_expression=167.515694071614,62.1176225598063,54.1449094873548,77.7333023058553,66.6191320828642,90.6548068324205,109.797941079897,90.515449732545,205.551534341433,196.614202110475,249.807015641012,248.490275270473,115.731693433495,127.196685519641,188.540125187665,178.178235303047,228.756734147904,115.143690355757,113.804979892763,76.8145269754435,81.0462555139695,174.156328406353,128.771496045495,119.034362558295,120.898691122399,47.6612530215467,61.1682034545886,79.7243560937789,114.014051673824,117.698070597888,125.721199541558,106.685153141218,99.0254308011158,142.633512913895,114.385241421505,111.709681680907,102.288847487447,128.489210636231,135.171014602617,167.004074327642,92.3523436208692,107.238141138476,126.718202141131,56.0240839991319,60.0151432819526,84.7985994986969,93.1045699774167,97.2392197456792,61.0727588001832,47.2464654750509,81.472097385961,76.1888591134349,214.258387935729,171.185465514677,192.245653109489,75.8915336306044,58.1662883075676,53.629897596854,275.352703229913,240.690895568775,192.684746665878,98.9426033641866,78.2579420577803,81.4409244139666,87.0202399058937,71.04801149461,94.0744347027791,132.555315335936,314.905352580847,314.293824436176,332.734088857886,115.68864868354,112.863824426275,324.355636321198,304.3093704829,204.066570627425,96.9019752794621,126.02740269008,124.267685404301,252.562241003321,210.696043216349,281.29322010065,94.9222196604695,114.803572446463,112.765106859286,127.574177510098,167.713839981343,190.686633079283,115.936801993105,111.845908958043,50.7262855227936,33.5565312022741,84.3164453797611,43.1762553310254,46.1341256387845,51.9711189032909,90.1653177245847,115.551758707923,130.41257431064,113.068663843309,143.378601332661,65.4465034813021,140.142881838655,184.877342819866,75.9883553949361,76.2613195080047,90.4888756576462,99.4541592353012,151.737599817243,79.1196601215516,217.030143784436,152.232739156071,140.906068823452,116.207155866072,157.451278854709,86.9612812001354,94.6756726422652,84.0122263704687,216.729585227719,188.943680738574,187.936132209795,175.52484163495,96.9237158334235,153.709918431062,124.830237260819,115.9775030647,165.9439474407,168.572667409148,204.583065587634,128.070996691123,134.962677831495,237.738034197539,114.202578366326,110.469077566703,142.750386612418,113.893366673566,240.340898686746,151.652097173703,52.3136109957707,89.8586724635244,332.197490883783,273.123700066966,298.723073347074,239.469955540951,248.197148904044,262.505012863657,227.132980332783,111.501152788516,499.03990363953,369.324174567751,295.245986347106,255.143832545697,217.989043392869,198.155482751113,182.11719072103,247.200559388569,174.148870453682,180.65823079453,229.888271011034,211.268287986212,209.197245503138,200.048950283188,197.918598949236,180.629564744117,194.376562238097,173.935390673305,168.207422677561,143.037544399783,178.053757606386,118.857243993265,87.7975207381618,80.7023930587834,97.6998013045175,73.9477367369648,119.23440083586,234.41670700001,73.0225510394194,135.398690131735,364.72290841525,310.500430277406,262.24528379046,201.683524623343,179.9038374705,142.478993958307,110.090742278327,157.781598625602,150.298454862561,162.348481185579,147.002921687817,124.935897802937,115.417718633087,140.593738917583,288.105541547731,300.473588163587,312.200427814433,264.543074871063,213.347735884388,214.124658125143,135.326189445911,109.526729800865,93.8852392491421,91.1905041382106,67.8876516029571,287.307272043114,255.133575656937,239.0284254651,245.663607001477,197.041739517725,175.182586025617,167.726848133823,185.15842897709,164.462286499661,297.600187511624,159.276325602119,130.431747361886,94.4645003522198,89.1605145203904,94.55893018722,113.992718332795,279.310340949695,359.826667983993,305.201664223788,273.179449007816,218.093147189244,154.966410216795,154.936116399092,187.112916054049,186.030339304971,148.133480082806,102.250708382621,108.791538575514,117.021088392443,129.680504187774,68.5321161611574,87.5340405973885,101.544722640142,103.715681132114,105.842152992759,193.443235544477,83.0629350502387,163.748765877037,151.880671531392,193.019364368588,180.899380050082,178.238939265915,179.753597050909,166.377198388382,164.83230386198,168.392593405219,154.555553198889,121.074892682653,231.129153560097,228.367517013714,102.281476242972,88.9392426877751,259.77528068583,264.230788787192,189.736710234434,167.436173263398,148.183741308973,172.113243250035,145.413491791002,152.580877948661,122.622262079097,87.497445117249,95.9160552208138,117.792103590811,293.679644365067,295.455233759811,229.340627483804,209.970836632452,161.423779929874,155.498824469004,156.190518895789,157.934059526877,86.003820770711,78.2875813095115,173.79011060032,176.965011658712,208.139903927066,179.65537772472,163.976758845316,142.534129111997,109.400928186201,195.818029394339,266.651833408483,234.456271650055,300.824425836492,294.986143421972,230.608398592175,152.640630134482,163.463296314033,155.474970529977,114.560474161814,360.148528692123,25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| |||
|short_description=p1@Hnrnpd | |||
}} | |||
Revision as of 05:42, 14 September 2013
| Short description: | p1@Hnrnpd |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Hnrnpd_5end |
| Coexpression cluster: | MCL_coexpression_mm9:561 |
| Association with transcript: | 0bp_to_ENSMUST00000019128, ENSMUST00000072750, ENSMUST00000112939, ENSMUST00000171786, ENSMUST00000172361, NM_001077265, NM_001077266, NM_001077267, NM_007516, uc008ygt.1, uc008ygu.1, uc008ygv.1, uc008ygw.1_5end |
| EntrezGene: | Hnrnpd |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| anterior region of body | 8.17e-08 | 43 |
| hemopoietic organ | 1.93e-07 | 29 |
| immune organ | 1.93e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
