FFCP PHASE1:Mm9::chr12:105101472..105101509,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=61|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:105101472..105101509,-|id=chr12:105101472..105101509,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.31e-12!22;UBERON:0007499!2.31e-12!22;UBERON:0006925!2.31e-12!22;UBERON:0009497!2.31e-12!22;UBERON:0000015!2.31e-12!22;UBERON:0002423!2.31e-12!22;UBERON:0006235!2.31e-12!22;UBERON:0008835!2.31e-12!22;UBERON:0003894!2.31e-12!22;UBERON:0004161!2.31e-12!22;UBERON:0008836!2.31e-12!22;UBERON:0009854!1.27e-11!23;UBERON:0009856!1.27e-11!23;UBERON:0002365!2.53e-10!25;UBERON:0002330!2.53e-10!25|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.57e-13,22;UBERON:0007499,7.57e-13,22;UBERON:0006925,7.57e-13,22;UBERON:0009497,7.57e-13,22;UBERON:0000015,7.57e-13,22;UBERON:0002423,7.57e-13,22;UBERON:0006235,7.57e-13,22;UBERON:0008835,7.57e-13,22;UBERON:0003894,7.57e-13,22;UBERON:0004161,7.57e-13,22;UBERON:0008836,7.57e-13,22;UBERON:0009854,3.27e-12,23;UBERON:0009856,3.27e-12,23;UBERON:0002365,4.29e-11,25;UBERON:0002330,4.29e-11,25;UBERON:0000160,2.67e-09,31;UBERON:0004119,3.26e-08,118;UBERON:0000925,3.26e-08,118;UBERON:0006595,3.26e-08,118;UBERON:0004921,1.14e-07,114;UBERON:0001007,1.82e-07,116;UBERON:0001555,1.82e-07,116;UBERON:0007026,1.82e-07,116|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,0,0,3.24888208723835,3.13618820968135,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,8.15743393523434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928946687441754,1.28867461322093,4.43703754171354,11.3412802360884,11.4135375667535,1.42358718463353,23.7166494802576,41.2189742432442,46.7547709296704,33.7287870716078,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.252946148497029,0,0,0.493588655687202,3.55743152504579,0,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0.648540907100142,2.47105271869273,1.43768206527355,0.744281895337007,2.49630138491648,1.26289438973556,1.97337154874103,2.8946611281802,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87642439752332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,1.27099242518292,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.666740183404846,1.23621034343337,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,0.842773567228942,0.448176066834085,0.689225627467359,0.952587382566147,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0,1.43061713968393,0.726732083161643,0.564656282491984,0.169229215783353,0.365855945745545,0.526139422875686,0.407412341537585,1.12228454331548,0.118635018124174,0.29551344712669,0.818462086339379,0.309873682371932,0.771626443924566,0,1.40358965067245,1.28922632428979,0,0,0|short_description=p@chr12:105101472..105101509,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=61 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:105101472..105101509,- | |||
|id=chr12:105101472..105101509,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.31e-12!22;UBERON:0007499!2.31e-12!22;UBERON:0006925!2.31e-12!22;UBERON:0009497!2.31e-12!22;UBERON:0000015!2.31e-12!22;UBERON:0002423!2.31e-12!22;UBERON:0006235!2.31e-12!22;UBERON:0008835!2.31e-12!22;UBERON:0003894!2.31e-12!22;UBERON:0004161!2.31e-12!22;UBERON:0008836!2.31e-12!22;UBERON:0009854!1.27e-11!23;UBERON:0009856!1.27e-11!23;UBERON:0002365!2.53e-10!25;UBERON:0002330!2.53e-10!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.57e-13,22;UBERON:0007499,7.57e-13,22;UBERON:0006925,7.57e-13,22;UBERON:0009497,7.57e-13,22;UBERON:0000015,7.57e-13,22;UBERON:0002423,7.57e-13,22;UBERON:0006235,7.57e-13,22;UBERON:0008835,7.57e-13,22;UBERON:0003894,7.57e-13,22;UBERON:0004161,7.57e-13,22;UBERON:0008836,7.57e-13,22;UBERON:0009854,3.27e-12,23;UBERON:0009856,3.27e-12,23;UBERON:0002365,4.29e-11,25;UBERON:0002330,4.29e-11,25;UBERON:0000160,2.67e-09,31;UBERON:0004119,3.26e-08,118;UBERON:0000925,3.26e-08,118;UBERON:0006595,3.26e-08,118;UBERON:0004921,1.14e-07,114;UBERON:0001007,1.82e-07,116;UBERON:0001555,1.82e-07,116;UBERON:0007026,1.82e-07,116 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,0,0,3.24888208723835,3.13618820968135,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,8.15743393523434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928946687441754,1.28867461322093,4.43703754171354,11.3412802360884,11.4135375667535,1.42358718463353,23.7166494802576,41.2189742432442,46.7547709296704,33.7287870716078,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.252946148497029,0,0,0.493588655687202,3.55743152504579,0,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0.648540907100142,2.47105271869273,1.43768206527355,0.744281895337007,2.49630138491648,1.26289438973556,1.97337154874103,2.8946611281802,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87642439752332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,1.27099242518292,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.666740183404846,1.23621034343337,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,0.842773567228942,0.448176066834085,0.689225627467359,0.952587382566147,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0,1.43061713968393,0.726732083161643,0.564656282491984,0.169229215783353,0.365855945745545,0.526139422875686,0.407412341537585,1.12228454331548,0.118635018124174,0.29551344712669,0.818462086339379,0.309873682371932,0.771626443924566,0,1.40358965067245,1.28922632428979,0,0,0 | |||
|short_description=p@chr12:105101472..105101509,- | |||
}} |
Revision as of 22:03, 12 September 2013
Short description: | p@chr12:105101472..105101509, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:105101472..105101509, - |
Coexpression cluster: | MCL_coexpression_mm9:61 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 7.57e-13 | 22 |
epithelial sac | 7.57e-13 | 22 |
digestive gland | 7.57e-13 | 22 |
epithelium of foregut-midgut junction | 7.57e-13 | 22 |
anatomical boundary | 7.57e-13 | 22 |
hepatobiliary system | 7.57e-13 | 22 |
foregut-midgut junction | 7.57e-13 | 22 |
hepatic diverticulum | 7.57e-13 | 22 |
liver primordium | 7.57e-13 | 22 |
septum transversum | 7.57e-13 | 22 |
liver bud | 7.57e-13 | 22 |
digestive tract diverticulum | 3.27e-12 | 23 |
sac | 3.27e-12 | 23 |
exocrine gland | 4.29e-11 | 25 |
exocrine system | 4.29e-11 | 25 |
intestine | 2.67e-09 | 31 |
endoderm-derived structure | 3.26e-08 | 118 |
endoderm | 3.26e-08 | 118 |
presumptive endoderm | 3.26e-08 | 118 |
subdivision of digestive tract | 1.14e-07 | 114 |
digestive system | 1.82e-07 | 116 |
digestive tract | 1.82e-07 | 116 |
primitive gut | 1.82e-07 | 116 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.