FFCP PHASE1:Mm9::chr3:96531376..96531428,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74414|HGNC=|UniProt=D3YYS2,Q9D483|association_with_transcript=0bp_to_ENSMUST00000125183,ENSMUST00000137009,ENSMUST00000141377_5end|description=CAGE_peak_1_at_Polr3c_5end|id=chr3:96531376..96531428,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.46e-13!130;UBERON:0000925!2.46e-13!130;UBERON:0006595!2.46e-13!130;UBERON:0001007!1.15e-12!128;UBERON:0001555!1.15e-12!128;UBERON:0007026!1.15e-12!128;UBERON:0004921!8.99e-12!126;UBERON:0004185!8.99e-12!126;UBERON:0000926!5.17e-08!193;UBERON:0004120!5.17e-08!193;UBERON:0006603!5.17e-08!193;UBERON:0005409!6.90e-08!59|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.11e-14,118;UBERON:0000925,6.11e-14,118;UBERON:0006595,6.11e-14,118;UBERON:0001007,2.94e-13,116;UBERON:0001555,2.94e-13,116;UBERON:0007026,2.94e-13,116;UBERON:0004921,2.45e-12,114;UBERON:0005409,3.42e-09,47;UBERON:0000160,3.05e-07,31|phase1_expression=16.4953312517938,29.6629096493457,24.1149596876454,29.9439569193762,22.5403078475856,25.0140115148716,21.7259755753839,31.1187209494199,11.1223090499817,11.0010327371337,30.4767983441399,30.3931925772232,41.2593759134206,38.5523974667779,22.3183540416494,29.1564385041349,20.9868563438444,35.0163003547644,34.8270661358576,25.8877687596798,40.5656494020603,36.9362338467293,28.7319768052829,44.1579086909802,40.3760334678219,21.8208146363708,28.861053742658,30.3814438087104,60.2374239676705,42.5930919294283,36.8072647687806,22.8611042445467,33.8285633171514,0,32.640233031894,28.2598897109437,24.7044921077467,42.6902263351646,46.0987853269042,50.7818031654584,32.9409633297368,29.3709558532132,39.3263385955234,21.0247686019214,18.4506014819517,15.9685674380663,7.04152209913235,23.1106665763273,18.6733255324301,19.4429899074283,25.8974880006921,14.3752564364972,31.207564726739,25.3876749703971,32.2650047176765,20.0662360108039,25.5014761545493,15.4701627683233,21.0409119293982,19.0436752537932,14.5781222806421,17.958760199664,19.5644855144451,12.5985960419396,14.8329954385046,5.6838409195688,12.8828047522914,11.9107674649682,19.8047159509192,21.4659441947388,22.9254207873006,14.8538511889978,15.4607978666129,20.0884910712525,27.6034956532521,13.7882817991503,12.1127469099328,18.2592893461818,16.7431121249305,25.7178261073878,25.6165402086747,21.3574481928272,18.1468949350898,11.8180148106653,17.72459674211,11.490514833473,15.8032565687004,17.7079473534036,23.7780247066198,26.6011891575885,22.6094301187309,12.0459342777394,18.3592260101093,24.2866436237018,30.5394916200404,32.7059627581055,33.2853275712252,18.7473354835864,17.1458763037893,17.666978725517,18.0279577314151,11.5493829672886,7.64415719119937,7.11066703153331,21.4326130601102,29.6431042605865,18.1988800205322,34.1409800359989,66.288098213676,24.0476265285016,19.7773272513395,28.6197549613413,28.5963216597513,23.2112866451039,32.2193057551831,23.24831939599,35.5960753537498,33.8362495192593,38.9228642857945,24.5885611920062,27.8260313260096,30.547140947519,54.0536107532554,24.8863677459815,27.8564120061895,56.4560092010987,32.2302684920926,29.9951365496704,32.1487674494854,24.8652461412006,20.1300265240196,22.3664746760899,21.5542157038423,21.2243829584174,21.1943805450751,24.6606719862992,28.9223793334898,31.9725914467939,29.0631172198726,30.7245109594252,31.2289063110489,20.6911893990126,26.829257340997,27.7296864817716,28.3712201461037,28.953700784376,23.2380276908127,24.0594134787285,34.4908788692548,26.6639573036625,21.4660371480018,22.5771604400402,20.2974491934686,22.984642990463,27.1632420058485,19.7043924150308,41.4305780514809,32.6831842035688,32.6788024304931,25.8907215669377,28.3776532577126,25.5688127274641,25.8051761787879,25.1858216636677,25.7626078521922,23.2533944750408,27.9004337455604,29.8919276459954,24.6839774870221,24.6251196118643,28.1308769124119,26.6083977114105,31.3956664866202,34.7594624589363,22.7113144449257,25.9319623195797,75.3354825203059,61.0880808992787,28.5806255717213,29.7262939981361,25.6446248030966,31.8659968904881,35.5804870151793,31.3872283085723,37.4877958620164,41.3394376357267,28.1495433856302,41.3829461845594,33.1438948102504,56.625622745216,55.9797549175458,55.9586977844772,35.4678974782263,30.2758558415781,24.7957018480777,26.4746726198908,27.3473006906352,32.3326129694369,30.5432474310163,36.7549268469209,36.2667061313576,39.610489618898,33.4991468608478,34.0364015660832,32.8253521839049,32.6050062958038,30.2261580868869,29.6647906495473,23.9348300674535,24.1664755458681,35.3454794369577,26.907018492432,21.5652309791032,30.8876986564858,29.6435789458833,34.3507274008072,34.2649059826852,38.113038187706,28.8214976659903,18.9491411770485,25.7484662778401,25.6315079520534,28.3975200429088,30.6536451118523,28.3271932654356,24.1965723343671,26.6403393539463,27.9045508957456,24.0776700672806,27.3651735575282,24.6939524068231,32.1120910050956,27.142431109069,43.5124547054968,28.5223278351041,32.2845993176537,25.68809439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| ||
|EntrezGene=74414 | |||
|HGNC= | |||
|UniProt=D3YYS2,Q9D483 | |||
|association_with_transcript=0bp_to_ENSMUST00000125183,ENSMUST00000137009,ENSMUST00000141377_5end | |||
|description=CAGE_peak_1_at_Polr3c_5end | |||
|id=chr3:96531376..96531428,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.46e-13!130;UBERON:0000925!2.46e-13!130;UBERON:0006595!2.46e-13!130;UBERON:0001007!1.15e-12!128;UBERON:0001555!1.15e-12!128;UBERON:0007026!1.15e-12!128;UBERON:0004921!8.99e-12!126;UBERON:0004185!8.99e-12!126;UBERON:0000926!5.17e-08!193;UBERON:0004120!5.17e-08!193;UBERON:0006603!5.17e-08!193;UBERON:0005409!6.90e-08!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.11e-14,118;UBERON:0000925,6.11e-14,118;UBERON:0006595,6.11e-14,118;UBERON:0001007,2.94e-13,116;UBERON:0001555,2.94e-13,116;UBERON:0007026,2.94e-13,116;UBERON:0004921,2.45e-12,114;UBERON:0005409,3.42e-09,47;UBERON:0000160,3.05e-07,31 | |||
|phase1_expression=16.4953312517938,29.6629096493457,24.1149596876454,29.9439569193762,22.5403078475856,25.0140115148716,21.7259755753839,31.1187209494199,11.1223090499817,11.0010327371337,30.4767983441399,30.3931925772232,41.2593759134206,38.5523974667779,22.3183540416494,29.1564385041349,20.9868563438444,35.0163003547644,34.8270661358576,25.8877687596798,40.5656494020603,36.9362338467293,28.7319768052829,44.1579086909802,40.3760334678219,21.8208146363708,28.861053742658,30.3814438087104,60.2374239676705,42.5930919294283,36.8072647687806,22.8611042445467,33.8285633171514,0,32.640233031894,28.2598897109437,24.7044921077467,42.6902263351646,46.0987853269042,50.7818031654584,32.9409633297368,29.3709558532132,39.3263385955234,21.0247686019214,18.4506014819517,15.9685674380663,7.04152209913235,23.1106665763273,18.6733255324301,19.4429899074283,25.8974880006921,14.3752564364972,31.207564726739,25.3876749703971,32.2650047176765,20.0662360108039,25.5014761545493,15.4701627683233,21.0409119293982,19.0436752537932,14.5781222806421,17.958760199664,19.5644855144451,12.5985960419396,14.8329954385046,5.6838409195688,12.8828047522914,11.9107674649682,19.8047159509192,21.4659441947388,22.9254207873006,14.8538511889978,15.4607978666129,20.0884910712525,27.6034956532521,13.7882817991503,12.1127469099328,18.2592893461818,16.7431121249305,25.7178261073878,25.6165402086747,21.3574481928272,18.1468949350898,11.8180148106653,17.72459674211,11.490514833473,15.8032565687004,17.7079473534036,23.7780247066198,26.6011891575885,22.6094301187309,12.0459342777394,18.3592260101093,24.2866436237018,30.5394916200404,32.7059627581055,33.2853275712252,18.7473354835864,17.1458763037893,17.666978725517,18.0279577314151,11.5493829672886,7.64415719119937,7.11066703153331,21.4326130601102,29.6431042605865,18.1988800205322,34.1409800359989,66.288098213676,24.0476265285016,19.7773272513395,28.6197549613413,28.5963216597513,23.2112866451039,32.2193057551831,23.24831939599,35.5960753537498,33.8362495192593,38.9228642857945,24.5885611920062,27.8260313260096,30.547140947519,54.0536107532554,24.8863677459815,27.8564120061895,56.4560092010987,32.2302684920926,29.9951365496704,32.1487674494854,24.8652461412006,20.1300265240196,22.3664746760899,21.5542157038423,21.2243829584174,21.1943805450751,24.6606719862992,28.9223793334898,31.9725914467939,29.0631172198726,30.7245109594252,31.2289063110489,20.6911893990126,26.829257340997,27.7296864817716,28.3712201461037,28.953700784376,23.2380276908127,24.0594134787285,34.4908788692548,26.6639573036625,21.4660371480018,22.5771604400402,20.2974491934686,22.984642990463,27.1632420058485,19.7043924150308,41.4305780514809,32.6831842035688,32.6788024304931,25.8907215669377,28.3776532577126,25.5688127274641,25.8051761787879,25.1858216636677,25.7626078521922,23.2533944750408,27.9004337455604,29.8919276459954,24.6839774870221,24.6251196118643,28.1308769124119,26.6083977114105,31.3956664866202,34.7594624589363,22.7113144449257,25.9319623195797,75.3354825203059,61.0880808992787,28.5806255717213,29.7262939981361,25.6446248030966,31.8659968904881,35.5804870151793,31.3872283085723,37.4877958620164,41.3394376357267,28.1495433856302,41.3829461845594,33.1438948102504,56.625622745216,55.9797549175458,55.9586977844772,35.4678974782263,30.2758558415781,24.7957018480777,26.4746726198908,27.3473006906352,32.3326129694369,30.5432474310163,36.7549268469209,36.2667061313576,39.610489618898,33.4991468608478,34.0364015660832,32.8253521839049,32.6050062958038,30.2261580868869,29.6647906495473,23.9348300674535,24.1664755458681,35.3454794369577,26.907018492432,21.5652309791032,30.8876986564858,29.6435789458833,34.3507274008072,34.2649059826852,38.113038187706,28.8214976659903,18.9491411770485,25.7484662778401,25.6315079520534,28.3975200429088,30.6536451118523,28.3271932654356,24.1965723343671,26.6403393539463,27.9045508957456,24.0776700672806,27.3651735575282,24.6939524068231,32.1120910050956,27.142431109069,43.5124547054968,28.5223278351041,32.2845993176537,25.6880943980467,25.6693593636925,26.7213960963981,38.1231100078603,18.2994767261429,24.5976408906882,20.2497993868831,21.9851294116348,17.8238939265915,19.5322806244294,21.8597778904443,23.0882127749936,22.9266911208984,19.2792789853084,26.1169756783214,29.5588902087644,29.971200521058,29.6946221350564,33.1862845849907,28.4053344301328,24.4882081141448,30.9312330799673,30.4160949667196,19.0609791725235,26.876542489495,24.7202936044704,26.0243086220847,24.9669038769295,25.3004660579997,23.721174947083,26.5542892487955,21.7873923777885,30.3992906889473,25.5061071687595,26.0690143454142,22.1177333826567,19.5813334516524,33.4911444026059,40.5982054950219,31.3511464878454,32.6382029121344,28.3604355059346,43.5953952078945,29.4327073649401,29.3655966247716,25.7701212599746,47.2198955340358,23.7344386573452,40.1546569874954,28.0686140429983,32.0386532349601,43.5131135680836,45.1090951479383,37.2908422326632,30.7660958288878,36.9471834134457,25.1523952324051,41.0508365746499,26.7303914576059,21.95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| |||
|short_description=p1@Polr3c | |||
}} | |||
Revision as of 03:09, 14 September 2013
| Short description: | p1@Polr3c |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Polr3c_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000125183, ENSMUST00000137009, ENSMUST00000141377_5end |
| EntrezGene: | Polr3c |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endoderm-derived structure | 6.11e-14 | 118 |
| endoderm | 6.11e-14 | 118 |
| presumptive endoderm | 6.11e-14 | 118 |
| digestive system | 2.94e-13 | 116 |
| digestive tract | 2.94e-13 | 116 |
| primitive gut | 2.94e-13 | 116 |
| subdivision of digestive tract | 2.45e-12 | 114 |
| gastrointestinal system | 3.42e-09 | 47 |
| intestine | 3.05e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
