FFCP PHASE1:Mm9::chr9:14438716..14438721,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=189|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:14438716..14438721,-|id=chr9:14438716..14438721,-|ontology_enrichment_celltype=CL:0002614!4.13e-15!3;CL:0000117!1.42e-09!23;CL:0000337!1.42e-09!23;CL:0002610!9.79e-08!3;CL:0002612!5.52e-07!3|ontology_enrichment_celltype_v019_2=CL:0002610,1.74e-24,3;CL:0000117,1.12e-07,23;CL:0000337,1.12e-07,23;CL:0002614,4.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!4.66e-28!6;UBERON:0002950!1.19e-19!4;UBERON:0001891!1.19e-19!4;UBERON:0009616!1.19e-19!4;UBERON:0002038!4.13e-15!3;UBERON:0002308!4.13e-15!3;UBERON:0009663!4.13e-15!3;UBERON:0009661!4.13e-15!3;UBERON:0006331!4.13e-15!3;UBERON:0000125!4.13e-15!3;UBERON:0002616!2.49e-12!49;UBERON:0000955!4.79e-12!50;UBERON:0006238!4.79e-12!50;UBERON:0001049!2.92e-11!52;UBERON:0005068!2.92e-11!52;UBERON:0006241!2.92e-11!52;UBERON:0007135!2.92e-11!52;UBERON:0000033!8.00e-11!63;UBERON:0001017!1.11e-10!73;UBERON:0005743!1.11e-10!73;UBERON:0000073!2.45e-10!75;UBERON:0001016!2.45e-10!75;UBERON:0001896!4.69e-10!2;UBERON:0005290!4.69e-10!2;UBERON:0010096!4.69e-10!2;UBERON:0002420!7.50e-10!8;UBERON:0007245!7.50e-10!8;UBERON:0010009!7.50e-10!8;UBERON:0010011!7.50e-10!8;UBERON:0000454!7.50e-10!8;UBERON:0004121!1.75e-09!102;UBERON:0000924!1.75e-09!102;UBERON:0006601!1.75e-09!102;UBERON:0002346!3.58e-09!71;UBERON:0003075!3.58e-09!71;UBERON:0007284!3.58e-09!71;UBERON:0004684!9.79e-08!3;UBERON:0002275!9.79e-08!3;UBERON:0007811!2.30e-07!86;UBERON:0002257!5.52e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.74e-24,3;UBERON:0002275,1.74e-24,3;UBERON:0000073,1.10e-08,54;UBERON:0001894,7.02e-08,10;UBERON:0006222,7.02e-08,10;UBERON:0002038,4.17e-07,3;UBERON:0009663,4.17e-07,3;UBERON:0009661,4.17e-07,3;UBERON:0000125,4.17e-07,3;UBERON:0002308,4.17e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70293280447044,2.4577045320999,0,0,0,0.558365998002762,2.25105044012672,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898743836428936,0.457500602818626,0,0.173824320192276,0,1.87009240103604,2.10913641988085,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:14438716..14438721,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=189 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:14438716..14438721,- | |||
|id=chr9:14438716..14438721,- | |||
|ontology_enrichment_celltype=CL:0002614!4.13e-15!3;CL:0000117!1.42e-09!23;CL:0000337!1.42e-09!23;CL:0002610!9.79e-08!3;CL:0002612!5.52e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.74e-24,3;CL:0000117,1.12e-07,23;CL:0000337,1.12e-07,23;CL:0002614,4.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!4.66e-28!6;UBERON:0002950!1.19e-19!4;UBERON:0001891!1.19e-19!4;UBERON:0009616!1.19e-19!4;UBERON:0002038!4.13e-15!3;UBERON:0002308!4.13e-15!3;UBERON:0009663!4.13e-15!3;UBERON:0009661!4.13e-15!3;UBERON:0006331!4.13e-15!3;UBERON:0000125!4.13e-15!3;UBERON:0002616!2.49e-12!49;UBERON:0000955!4.79e-12!50;UBERON:0006238!4.79e-12!50;UBERON:0001049!2.92e-11!52;UBERON:0005068!2.92e-11!52;UBERON:0006241!2.92e-11!52;UBERON:0007135!2.92e-11!52;UBERON:0000033!8.00e-11!63;UBERON:0001017!1.11e-10!73;UBERON:0005743!1.11e-10!73;UBERON:0000073!2.45e-10!75;UBERON:0001016!2.45e-10!75;UBERON:0001896!4.69e-10!2;UBERON:0005290!4.69e-10!2;UBERON:0010096!4.69e-10!2;UBERON:0002420!7.50e-10!8;UBERON:0007245!7.50e-10!8;UBERON:0010009!7.50e-10!8;UBERON:0010011!7.50e-10!8;UBERON:0000454!7.50e-10!8;UBERON:0004121!1.75e-09!102;UBERON:0000924!1.75e-09!102;UBERON:0006601!1.75e-09!102;UBERON:0002346!3.58e-09!71;UBERON:0003075!3.58e-09!71;UBERON:0007284!3.58e-09!71;UBERON:0004684!9.79e-08!3;UBERON:0002275!9.79e-08!3;UBERON:0007811!2.30e-07!86;UBERON:0002257!5.52e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.74e-24,3;UBERON:0002275,1.74e-24,3;UBERON:0000073,1.10e-08,54;UBERON:0001894,7.02e-08,10;UBERON:0006222,7.02e-08,10;UBERON:0002038,4.17e-07,3;UBERON:0009663,4.17e-07,3;UBERON:0009661,4.17e-07,3;UBERON:0000125,4.17e-07,3;UBERON:0002308,4.17e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70293280447044,2.4577045320999,0,0,0,0.558365998002762,2.25105044012672,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898743836428936,0.457500602818626,0,0.173824320192276,0,1.87009240103604,2.10913641988085,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:14438716..14438721,- | |||
}} |
Revision as of 17:20, 14 September 2013
Short description: | p@chr9:14438716..14438721, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:14438716..14438721, - |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.74e-24 | 3 |
CNS neuron (sensu Vertebrata) | 1.12e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.12e-07 | 23 |
neuron of the substantia nigra | 4.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.74e-24 | 3 |
reticular formation | 1.74e-24 | 3 |
regional part of nervous system | 1.10e-08 | 54 |
diencephalon | 7.02e-08 | 10 |
future diencephalon | 7.02e-08 | 10 |
substantia nigra | 4.17e-07 | 3 |
telencephalic nucleus | 4.17e-07 | 3 |
midbrain nucleus | 4.17e-07 | 3 |
neural nucleus | 4.17e-07 | 3 |
nucleus of brain | 4.17e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.