FFCP PHASE1:Mm9::chr14:14793892..14793956,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66231|HGNC=|UniProt=Q7TMY4|association_with_transcript=-153bp_to_ENSMUST00000065865,NM_001013578,NM_025435,uc007sge.1,uc007sgf.1,uc007sgg.1,uc007sgh.1_5end|description=CAGE_peak_2_at_Thoc7_5end|id=chr14:14793892..14793956,-|ontology_enrichment_celltype=CL:0000066!3.44e-08!25;CL:0000223!2.13e-07!20;CL:0002076!3.18e-07!15|ontology_enrichment_celltype_v019_2=CL:0000066,3.44e-08,25;CL:0000223,2.13e-07,20;CL:0002076,3.18e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.73e-12!59;UBERON:0004923!8.58e-09!24;UBERON:0000344!1.85e-08!15;UBERON:0000160!3.54e-08!43;UBERON:0001007!1.45e-07!128;UBERON:0001555!1.45e-07!128;UBERON:0007026!1.45e-07!128;UBERON:0001242!1.62e-07!13;UBERON:0000060!1.62e-07!13;UBERON:0001262!1.62e-07!13;UBERON:0004786!1.62e-07!13;UBERON:0004119!3.04e-07!130;UBERON:0000925!3.04e-07!130;UBERON:0006595!3.04e-07!130;UBERON:0004921!6.23e-07!126;UBERON:0004185!6.23e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.30e-15,47;UBERON:0000160,1.46e-10,31;UBERON:0004923,8.58e-09,24;UBERON:0000344,1.85e-08,15;UBERON:0001007,5.59e-08,116;UBERON:0001555,5.59e-08,116;UBERON:0007026,5.59e-08,116;UBERON:0004119,1.26e-07,118;UBERON:0000925,1.26e-07,118;UBERON:0006595,1.26e-07,118;UBERON:0001242,1.62e-07,13;UBERON:0001262,1.62e-07,13;UBERON:0004786,1.62e-07,13;UBERON:0004921,2.55e-07,114|phase1_expression=5.2849119544582,8.37540978334467,10.4649825059593,10.8887116070459,12.5223932486587,11.2479112180966,7.47560449905682,4.51931632045517,2.111830832275,1.87251621057595,3.5955773327356,1.67521533890206,1.19840510951844,2.01066925563694,25.649451659806,16.1980213911861,31.4802845157666,2.05050407482854,1.7824876368746,2.97072756258621,4.08207792725135,6.65249373045932,4.4403964153619,10.3995074815714,10.5528269290898,10.9104073181854,12.4920978886132,8.61884930743556,16.5320374927045,14.617747526076,7.53883736228036,0.635030673459631,2.46025915033828,0,15.8868390863201,18.6182802801511,14.7001936508906,5.02237956884289,8.5946887897618,5.75876118371178,5.29408339227913,8.19654581950135,6.311634589405,8.43508680436368,7.90740063512214,8.25960384727567,0,4.57852828398938,5.71184075109627,5.24960727500565,7.55926676776958,2.87505128729943,0.838913030288682,2.90144856804538,3.02484419228218,6.17422646486273,6.30373567865265,8.25075347643908,4.65327859977075,4.23192783417626,1.90149421051854,5.08266798103698,4.4464739805557,1.3498495759221,0.988866362566974,2.1314403448383,2.99600110518405,5.37905627450176,6.947204024668,4.45519596494579,3.78584930432488,3.99911378165325,3.97563373712904,5.02212276781312,5.07980996396653,9.19218786610021,1.10115880999389,3.83062014255563,2.76491759861238,2.37395317914349,2.47016637726506,2.08365348222704,5.30447698102624,2.8138130501584,2.90316670775939,3.83017161115768,2.98980529678116,4.84638559145781,6.05809546665472,3.77857800533928,4.92769630792852,12.0459342777394,6.79971333707751,7.01614149129162,7.79731700937203,9.40856462904405,7.02222100658759,6.13549161281008,10.9110121933205,10.6001872353102,5.49289337129054,10.2661181931454,5.09610479413291,21.3320010945999,11.0410430915719,7.60079596425296,8.08839112023653,6.96521666286266,0.776813650941515,3.26572705942614,5.72501578328248,4.56698217468212,5.76538743140146,5.27529241934179,4.8211369925639,5.90632979249475,5.93267922562497,3.61498392299779,9.73071607144862,7.60304194752823,9.71702681225732,11.1521308221101,13.0474232852686,1.75668478206928,2.72280718857492,8.68553987709211,3.83408398418945,8.39863823390771,4.95573885584952,3.89455662452539,1.83000241127451,3.76963056338593,2.25971616249959,5.62574006126727,3.1168206683934,4.54275536589721,8.04530974417499,8.58408097209642,4.29628689337247,5.47148825304832,5.72529949035896,3.90833577536904,4.32149111532838,4.21973489940002,3.53789795586905,3.71529788826064,4.40398105430725,5.43277078551933,4.31135985865684,4.9167580843633,3.34307135911503,4.3839146485515,5.83899223373756,9.4028084960985,8.64284972913362,5.9710280045548,2.80885274925294,2.57347907114715,3.9782889915383,2.69263504296152,2.81431271977315,6.12211008967451,2.3674473558521,3.14822770795846,6.01641740260775,3.95307706075693,5.90201483079162,7.70651259623319,5.9241545968853,5.91002870684743,7.05298643048945,8.33339928324394,6.80605357402257,7.91817870686193,2.3131894342054,2.98423375899925,9.58214470653014,11.1069237998689,6.39864751605702,7.19933682767359,4.89696353023955,5.64713868945359,6.89371935919098,8.17970192284004,11.3886974770683,8.89374355509659,9.29940272560997,5.76973768919337,10.1381325301942,4.49409704327111,9.29393614461185,12.1476176685164,3.41402221715547,3.77020091612105,3.38123207019241,4.07302655690629,5.04276466635827,4.97964321221262,5.6280518040589,6.9376769550413,7.22194148070324,8.39100714668244,11.858105083486,9.67701613153345,10.4176267409998,10.793381394473,14.2002084971952,8.68237775108701,10.1850340712568,7.76779571117189,8.10676133875177,10.7078951143352,5.75072826109418,3.72140947668503,6.552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| ||
|EntrezGene=66231 | |||
|HGNC= | |||
|UniProt=Q7TMY4 | |||
|association_with_transcript=-153bp_to_ENSMUST00000065865,NM_001013578,NM_025435,uc007sge.1,uc007sgf.1,uc007sgg.1,uc007sgh.1_5end | |||
|description=CAGE_peak_2_at_Thoc7_5end | |||
|id=chr14:14793892..14793956,- | |||
|ontology_enrichment_celltype=CL:0000066!3.44e-08!25;CL:0000223!2.13e-07!20;CL:0002076!3.18e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.44e-08,25;CL:0000223,2.13e-07,20;CL:0002076,3.18e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.73e-12!59;UBERON:0004923!8.58e-09!24;UBERON:0000344!1.85e-08!15;UBERON:0000160!3.54e-08!43;UBERON:0001007!1.45e-07!128;UBERON:0001555!1.45e-07!128;UBERON:0007026!1.45e-07!128;UBERON:0001242!1.62e-07!13;UBERON:0000060!1.62e-07!13;UBERON:0001262!1.62e-07!13;UBERON:0004786!1.62e-07!13;UBERON:0004119!3.04e-07!130;UBERON:0000925!3.04e-07!130;UBERON:0006595!3.04e-07!130;UBERON:0004921!6.23e-07!126;UBERON:0004185!6.23e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.30e-15,47;UBERON:0000160,1.46e-10,31;UBERON:0004923,8.58e-09,24;UBERON:0000344,1.85e-08,15;UBERON:0001007,5.59e-08,116;UBERON:0001555,5.59e-08,116;UBERON:0007026,5.59e-08,116;UBERON:0004119,1.26e-07,118;UBERON:0000925,1.26e-07,118;UBERON:0006595,1.26e-07,118;UBERON:0001242,1.62e-07,13;UBERON:0001262,1.62e-07,13;UBERON:0004786,1.62e-07,13;UBERON:0004921,2.55e-07,114 | |||
|phase1_expression=5.2849119544582,8.37540978334467,10.4649825059593,10.8887116070459,12.5223932486587,11.2479112180966,7.47560449905682,4.51931632045517,2.111830832275,1.87251621057595,3.5955773327356,1.67521533890206,1.19840510951844,2.01066925563694,25.649451659806,16.1980213911861,31.4802845157666,2.05050407482854,1.7824876368746,2.97072756258621,4.08207792725135,6.65249373045932,4.4403964153619,10.3995074815714,10.5528269290898,10.9104073181854,12.4920978886132,8.61884930743556,16.5320374927045,14.617747526076,7.53883736228036,0.635030673459631,2.46025915033828,0,15.8868390863201,18.6182802801511,14.7001936508906,5.02237956884289,8.5946887897618,5.75876118371178,5.29408339227913,8.19654581950135,6.311634589405,8.43508680436368,7.90740063512214,8.25960384727567,0,4.57852828398938,5.71184075109627,5.24960727500565,7.55926676776958,2.87505128729943,0.838913030288682,2.90144856804538,3.02484419228218,6.17422646486273,6.30373567865265,8.25075347643908,4.65327859977075,4.23192783417626,1.90149421051854,5.08266798103698,4.4464739805557,1.3498495759221,0.988866362566974,2.1314403448383,2.99600110518405,5.37905627450176,6.947204024668,4.45519596494579,3.78584930432488,3.99911378165325,3.97563373712904,5.02212276781312,5.07980996396653,9.19218786610021,1.10115880999389,3.83062014255563,2.76491759861238,2.37395317914349,2.47016637726506,2.08365348222704,5.30447698102624,2.8138130501584,2.90316670775939,3.83017161115768,2.98980529678116,4.84638559145781,6.05809546665472,3.77857800533928,4.92769630792852,12.0459342777394,6.79971333707751,7.01614149129162,7.79731700937203,9.40856462904405,7.02222100658759,6.13549161281008,10.9110121933205,10.6001872353102,5.49289337129054,10.2661181931454,5.09610479413291,21.3320010945999,11.0410430915719,7.60079596425296,8.08839112023653,6.96521666286266,0.776813650941515,3.26572705942614,5.72501578328248,4.56698217468212,5.76538743140146,5.27529241934179,4.8211369925639,5.90632979249475,5.93267922562497,3.61498392299779,9.73071607144862,7.60304194752823,9.71702681225732,11.1521308221101,13.0474232852686,1.75668478206928,2.72280718857492,8.68553987709211,3.83408398418945,8.39863823390771,4.95573885584952,3.89455662452539,1.83000241127451,3.76963056338593,2.25971616249959,5.62574006126727,3.1168206683934,4.54275536589721,8.04530974417499,8.58408097209642,4.29628689337247,5.47148825304832,5.72529949035896,3.90833577536904,4.32149111532838,4.21973489940002,3.53789795586905,3.71529788826064,4.40398105430725,5.43277078551933,4.31135985865684,4.9167580843633,3.34307135911503,4.3839146485515,5.83899223373756,9.4028084960985,8.64284972913362,5.9710280045548,2.80885274925294,2.57347907114715,3.9782889915383,2.69263504296152,2.81431271977315,6.12211008967451,2.3674473558521,3.14822770795846,6.01641740260775,3.95307706075693,5.90201483079162,7.70651259623319,5.9241545968853,5.91002870684743,7.05298643048945,8.33339928324394,6.80605357402257,7.91817870686193,2.3131894342054,2.98423375899925,9.58214470653014,11.1069237998689,6.39864751605702,7.19933682767359,4.89696353023955,5.64713868945359,6.89371935919098,8.17970192284004,11.3886974770683,8.89374355509659,9.29940272560997,5.76973768919337,10.1381325301942,4.49409704327111,9.29393614461185,12.1476176685164,3.41402221715547,3.77020091612105,3.38123207019241,4.07302655690629,5.04276466635827,4.97964321221262,5.6280518040589,6.9376769550413,7.22194148070324,8.39100714668244,11.858105083486,9.67701613153345,10.4176267409998,10.793381394473,14.2002084971952,8.68237775108701,10.1850340712568,7.76779571117189,8.10676133875177,10.7078951143352,5.75072826109418,3.72140947668503,6.55279113540577,6.31447194867779,7.17589654087649,10.1313139486307,4.0645701836653,4.9267767060326,2.28150967018836,3.90413697282933,5.63256595892405,4.52266895092903,5.71304738126433,7.61021226645415,3.78324345854858,5.09368786192182,4.9430978283821,6.39066927391378,5.52591941970866,6.219909519005,6.03165135757089,1.08781136763742,7.37646409528554,4.69092468718045,2.24770825982909,3.8679856575427,6.22952792431367,8.83648245215305,11.6738041184015,10.5418460960092,5.81643173878557,6.93009514062401,5.79276552614225,7.92614286208731,7.2865926301481,9.35218745316198,12.2539211163422,1.60660658210904,3.69044221541498,4.09550888434687,6.02681749608232,2.47455184458803,5.30980553359851,5.82673526771955,3.62788268357701,3.39489143560617,2.95301892880773,5.53383266299069,6.97756391554197,5.45300594216258,5.70395805415554,6.63677191665214,8.4334886859999,6.18813259489121,2.38307724027652,5.40183282093931,3.49268446213437,4.71541477069503,3.19212420556092,3.0322698992352,3.45552943264454,0.608929898229199,4.4587624532105,4.2366414172764,2.42581237860458,7.09010887648364,7.10443477461984,7.53911561601948,7.40108532819446,7.55048138827282,7.86998258900597,4.07935664423121,11.619219894254,2.88941615148511,10.1856990053341,19.4019510714832,20.0940514749907,16.0144721244566,4.41943917984024,5.87796099759364,5.11339903076368,11.4560474161814,5.21954389408873,4.47302827679067,8.7484326065659,8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| |||
|short_description=p2@Thoc7 | |||
}} | |||
Revision as of 01:41, 13 September 2013
| Short description: | p2@Thoc7 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Thoc7_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -153bp_to_ENSMUST00000065865, NM_001013578, NM_025435, uc007sge.1, uc007sgf.1, uc007sgg.1, uc007sgh.1_5end |
| EntrezGene: | Thoc7 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 3.44e-08 | 25 |
| endodermal cell | 2.13e-07 | 20 |
| endo-epithelial cell | 3.18e-07 | 15 |
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system | 6.30e-15 | 47 |
| intestine | 1.46e-10 | 31 |
| organ component layer | 8.58e-09 | 24 |
| mucosa | 1.85e-08 | 15 |
| digestive system | 5.59e-08 | 116 |
| digestive tract | 5.59e-08 | 116 |
| primitive gut | 5.59e-08 | 116 |
| endoderm-derived structure | 1.26e-07 | 118 |
| endoderm | 1.26e-07 | 118 |
| presumptive endoderm | 1.26e-07 | 118 |
| intestinal mucosa | 1.62e-07 | 13 |
| wall of intestine | 1.62e-07 | 13 |
| gastrointestinal system mucosa | 1.62e-07 | 13 |
| subdivision of digestive tract | 2.55e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
