FFCP PHASE1:Mm9::chr1:137707465..137707470,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=356|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:137707465..137707470,+|id=chr1:137707465..137707470,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!7.97e-21!18;UBERON:0000948!7.97e-21!18;UBERON:0005498!7.97e-21!18;UBERON:0004140!7.97e-21!18;UBERON:0009881!7.97e-21!18;UBERON:0004141!7.97e-21!18;UBERON:0003084!7.97e-21!18;UBERON:0007005!7.97e-21!18;UBERON:0004139!7.97e-21!18;UBERON:0004291!7.97e-21!18;UBERON:0004535!6.10e-16!23;UBERON:0001009!6.10e-16!23;UBERON:0004872!1.32e-10!33;UBERON:0003103!9.43e-08!43;UBERON:0003914!5.96e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.68e-15,18;UBERON:0000948,1.68e-15,18;UBERON:0005498,1.68e-15,18;UBERON:0004140,1.68e-15,18;UBERON:0009881,1.68e-15,18;UBERON:0004141,1.68e-15,18;UBERON:0003084,1.68e-15,18;UBERON:0007005,1.68e-15,18;UBERON:0004139,1.68e-15,18;UBERON:0004291,1.68e-15,18;UBERON:0004535,2.24e-12,23;UBERON:0001009,2.24e-12,23;UBERON:0004872,6.05e-09,33;UBERON:0003103,4.30e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,1.17263029990548,0.720248245844059,0.23674473558521,0.590292695242212,1.85120535464854,5.11574678450897,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr1:137707465..137707470,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=356 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:137707465..137707470,+ | |||
|id=chr1:137707465..137707470,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.97e-21!18;UBERON:0000948!7.97e-21!18;UBERON:0005498!7.97e-21!18;UBERON:0004140!7.97e-21!18;UBERON:0009881!7.97e-21!18;UBERON:0004141!7.97e-21!18;UBERON:0003084!7.97e-21!18;UBERON:0007005!7.97e-21!18;UBERON:0004139!7.97e-21!18;UBERON:0004291!7.97e-21!18;UBERON:0004535!6.10e-16!23;UBERON:0001009!6.10e-16!23;UBERON:0004872!1.32e-10!33;UBERON:0003103!9.43e-08!43;UBERON:0003914!5.96e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.68e-15,18;UBERON:0000948,1.68e-15,18;UBERON:0005498,1.68e-15,18;UBERON:0004140,1.68e-15,18;UBERON:0009881,1.68e-15,18;UBERON:0004141,1.68e-15,18;UBERON:0003084,1.68e-15,18;UBERON:0007005,1.68e-15,18;UBERON:0004139,1.68e-15,18;UBERON:0004291,1.68e-15,18;UBERON:0004535,2.24e-12,23;UBERON:0001009,2.24e-12,23;UBERON:0004872,6.05e-09,33;UBERON:0003103,4.30e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,1.17263029990548,0.720248245844059,0.23674473558521,0.590292695242212,1.85120535464854,5.11574678450897,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr1:137707465..137707470,+ | |||
}} |
Revision as of 19:01, 13 September 2013
Short description: | p@chr1:137707465..137707470, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:137707465..137707470, + |
Coexpression cluster: | MCL_coexpression_mm9:356 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.68e-15 | 18 |
heart | 1.68e-15 | 18 |
primitive heart tube | 1.68e-15 | 18 |
primary heart field | 1.68e-15 | 18 |
anterior lateral plate mesoderm | 1.68e-15 | 18 |
heart tube | 1.68e-15 | 18 |
heart primordium | 1.68e-15 | 18 |
cardiac mesoderm | 1.68e-15 | 18 |
cardiogenic plate | 1.68e-15 | 18 |
heart rudiment | 1.68e-15 | 18 |
cardiovascular system | 2.24e-12 | 23 |
circulatory system | 2.24e-12 | 23 |
splanchnic layer of lateral plate mesoderm | 6.05e-09 | 33 |
compound organ | 4.30e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.