FFCP PHASE1:Mm9::chr10:128079984..128079997,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=29|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:128079984..128079997,-|id=chr10:128079984..128079997,-|ontology_enrichment_celltype=CL:0000624!3.09e-13!8;CL:0000791!9.52e-12!9;CL:0000789!9.52e-12!9;CL:0002420!9.52e-12!9;CL:0002419!9.52e-12!9;CL:0000790!9.52e-12!9;CL:0000084!1.40e-09!11;CL:0000827!1.40e-09!11;CL:0000838!9.16e-09!12;CL:0000542!4.49e-08!13;CL:0000051!4.49e-08!13;CL:0002031!8.77e-08!25|ontology_enrichment_celltype_v019_2=CL:0000815,2.74e-44,1;CL:0000792,2.74e-44,1;CL:0000624,8.41e-23,8;CL:0000791,1.98e-20,9;CL:0000789,1.98e-20,9;CL:0002420,1.98e-20,9;CL:0002419,1.98e-20,9;CL:0000790,1.98e-20,9;CL:0000084,5.67e-17,11;CL:0000827,5.67e-17,11;CL:0000838,1.13e-15,12;CL:0000542,1.42e-14,13;CL:0000051,1.42e-14,13;CL:0000738,1.86e-11,17;CL:0002087,1.86e-11,17;CL:0002031,3.41e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!1.80e-12!41;UBERON:0001004!3.97e-12!42;UBERON:0002193!1.36e-10!48;UBERON:0002370!2.91e-10!23;UBERON:0000974!2.91e-10!23;UBERON:0004807!2.91e-10!23;UBERON:0005058!2.91e-10!23;UBERON:0003351!2.91e-10!23;UBERON:0009113!2.91e-10!23;UBERON:0003295!2.91e-10!23;UBERON:0009722!2.91e-10!23;UBERON:0005562!2.91e-10!23;UBERON:0007690!2.91e-10!23;UBERON:0004177!4.38e-10!29;UBERON:0006562!8.58e-10!24;UBERON:0003408!8.58e-10!24;UBERON:0001557!8.58e-10!24;UBERON:0001042!8.58e-10!24;UBERON:0008814!8.58e-10!24;UBERON:0009145!8.58e-10!24;UBERON:0002390!2.00e-09!45;UBERON:0003061!2.00e-09!45;UBERON:0000072!1.36e-08!27|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,24.7916781007826,0,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0.699561878128147,0.630924330716475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:128079984..128079997,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:128079984..128079997,- | |||
|id=chr10:128079984..128079997,- | |||
|ontology_enrichment_celltype=CL:0000624!3.09e-13!8;CL:0000791!9.52e-12!9;CL:0000789!9.52e-12!9;CL:0002420!9.52e-12!9;CL:0002419!9.52e-12!9;CL:0000790!9.52e-12!9;CL:0000084!1.40e-09!11;CL:0000827!1.40e-09!11;CL:0000838!9.16e-09!12;CL:0000542!4.49e-08!13;CL:0000051!4.49e-08!13;CL:0002031!8.77e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,2.74e-44,1;CL:0000792,2.74e-44,1;CL:0000624,8.41e-23,8;CL:0000791,1.98e-20,9;CL:0000789,1.98e-20,9;CL:0002420,1.98e-20,9;CL:0002419,1.98e-20,9;CL:0000790,1.98e-20,9;CL:0000084,5.67e-17,11;CL:0000827,5.67e-17,11;CL:0000838,1.13e-15,12;CL:0000542,1.42e-14,13;CL:0000051,1.42e-14,13;CL:0000738,1.86e-11,17;CL:0002087,1.86e-11,17;CL:0002031,3.41e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!1.80e-12!41;UBERON:0001004!3.97e-12!42;UBERON:0002193!1.36e-10!48;UBERON:0002370!2.91e-10!23;UBERON:0000974!2.91e-10!23;UBERON:0004807!2.91e-10!23;UBERON:0005058!2.91e-10!23;UBERON:0003351!2.91e-10!23;UBERON:0009113!2.91e-10!23;UBERON:0003295!2.91e-10!23;UBERON:0009722!2.91e-10!23;UBERON:0005562!2.91e-10!23;UBERON:0007690!2.91e-10!23;UBERON:0004177!4.38e-10!29;UBERON:0006562!8.58e-10!24;UBERON:0003408!8.58e-10!24;UBERON:0001557!8.58e-10!24;UBERON:0001042!8.58e-10!24;UBERON:0008814!8.58e-10!24;UBERON:0009145!8.58e-10!24;UBERON:0002390!2.00e-09!45;UBERON:0003061!2.00e-09!45;UBERON:0000072!1.36e-08!27 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,24.7916781007826,0,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0.699561878128147,0.630924330716475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:128079984..128079997,- | |||
}} |
Revision as of 16:10, 12 September 2013
Short description: | p@chr10:128079984..128079997, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:128079984..128079997, - |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 2.74e-44 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.74e-44 | 1 |
CD4-positive, alpha-beta T cell | 8.41e-23 | 8 |
mature alpha-beta T cell | 1.98e-20 | 9 |
alpha-beta T cell | 1.98e-20 | 9 |
immature T cell | 1.98e-20 | 9 |
mature T cell | 1.98e-20 | 9 |
immature alpha-beta T cell | 1.98e-20 | 9 |
T cell | 5.67e-17 | 11 |
pro-T cell | 5.67e-17 | 11 |
lymphoid lineage restricted progenitor cell | 1.13e-15 | 12 |
lymphocyte | 1.42e-14 | 13 |
common lymphoid progenitor | 1.42e-14 | 13 |
leukocyte | 1.86e-11 | 17 |
nongranular leukocyte | 1.86e-11 | 17 |
hematopoietic lineage restricted progenitor cell | 3.41e-08 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.