FFCP PHASE1:Mm9::chr11:115425751..115425804,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=445007|HGNC=|MCL_coexpression_id=1044|UniProt=Q8R480|association_with_transcript=0bp_to_NM_001002929,uc007mhx.2_5end|description=CAGE_peak_1_at_Nup85_5end|id=chr11:115425751..115425804,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.08e-07!29;UBERON:0001048!9.94e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.08e-07,29;UBERON:0005057,4.08e-07,29|phase1_expression=22.1005409004616,5.23463111459042,4.09499315450582,2.11724947914781,3.00537437967808,21.1527882608981,19.8570744506197,22.9839515726006,11.403886494285,14.7460651582856,37.4967350413856,33.1054459830646,25.8513102196121,25.2644962990902,65.2895133158699,59.9326791473885,81.149177862865,26.8142840554502,25.5032846506674,31.8292238848523,17.5189177711204,36.5390700419258,40.7471671056739,11.3594620183319,11.0116454912242,4.59385571292016,12.0613358924541,9.69620547086501,9.12112413390595,18.3981994724749,16.6297882991479,123.830981324628,114.40205049073,47.5445043046316,38.9949686664221,49.2054550261137,40.6297018962115,9.62622750694888,26.5654017138092,25.1291397107423,6.47054636834116,9.56263678941824,8.73918635456076,21.2765622378726,20.7822709000005,16.702754446713,17.2126095756569,15.4797861030117,12.5221124158649,13.8045228342741,18.3382212329225,18.6878333674463,27.0129995752956,21.035502118329,21.8460969442602,15.6928255981928,15.1862723167541,17.532851137433,22.659443616275,22.2176211294254,25.9870875437533,13.8926258148344,20.4537803105562,12.5985960419396,10.8775299882367,15.6305625288142,8.38880309451533,9.22123932771731,29.96629795715,30.9163598779572,29.6558195505449,19.1386159550548,20.9825113904033,31.6026261974581,32.4916146751821,29.4150011715207,23.1243350098716,19.1531007127782,16.2822925251618,21.8931237632122,23.6038120494217,30.2129754922921,20.1011759280994,23.0732670112989,18.7941844765476,20.6240009831567,18.5083185038834,21.9951346073855,25.0653699932839,21.4623230703271,20.2905142091174,18.0689014166091,12.2394840067395,16.7307989407723,14.9448576012964,9.40856462904405,15.7297750547562,19.4290567738986,22.6013824004496,25.7937889392548,17.4645840523084,21.815501160434,40.7688383530633,42.6640021891999,33.339620315727,33.443502242713,31.8480400359313,14.2729849648825,16.572024553419,17.3677302705845,34.1766093729288,23.748307308347,23.753396217374,24.7185130506301,20.8132011630198,22.2429866653526,8.89901883843746,10.4111536982336,32.7305904221453,27.8238981909544,37.7638996567273,29.0925151881133,11.1835056730873,30.1564220921894,29.7414323675106,14.5610521468897,37.7417642193649,29.395233818677,33.0382590389968,20.8208988772704,13.2675174817402,30.7853162676518,19.1206752211504,16.8772201838018,14.3373750746096,19.7934340942664,30.0426123358433,24.2593592689681,17.4378703319236,17.6771158944638,32.6602311836386,36.3245325004887,27.3694437304131,34.2099936487073,31.7730451036701,32.9252261132064,30.5467622064716,19.4027528054262,37.0776947844489,27.0421694639982,27.2724242454121,28.4954452155847,29.751055667139,28.2084254882955,23.0475992776897,34.8309966932363,40.0261516768544,38.0874902529778,36.941254921427,29.8261112451123,26.2669187178828,24.8485644816201,20.3600472603281,24.2020005049307,29.1564843357145,24.1835302540424,26.0225199357631,16.8142093008724,25.6713365865029,15.7600765515931,12.1603214318784,16.9591985413385,13.3925570327541,13.9574675510787,18.7158054222073,24.0796792967526,4.62586296177317,20.0982430664294,36.2590025909898,30.8874773574383,34.536479634321,23.5969723809311,16.6783532883653,15.7887269673424,18.506633400236,10.0466362381647,12.3154252312132,9.35095418593409,14.2323783596958,20.6728463990471,16.8587678902262,11.5501938487533,35.0885616763201,31.5325894802852,25.9227792048085,25.0491133249736,27.3473006906352,19.0769430101666,17.200338097798,10.6279306545314,16.0138702398202,10.6121560972748,11.858105083486,47.2171649176546,54.250282651244,44.522698252201,45.2378070696361,46.306014672464,37.4300002118687,24.7418678207697,21.4018499343047,35.6929837144506,20.1275489138296,16.0020607497456,23.7148631567066,20.2063102357689,18.477933592757,11.0962009913574,19.0295785871603,39.6037050600313,35.5263648643616,40.0598402429444,34.7341567466983,20.938282180227,15.9489239393629,12.8788207586147,20.1772984455924,15.723992965063,16.4238411717212,19.4997344511728,20.5495128420416,19.6722719670856,16.5870412333199,15.7732648307426,18.6870423747234,15.452457793065,16.0550589987792,16.4096361229084,23.7705670796179,13.1284882146274,32.1818383804582,29.6733445665445,25.4199609324703,25.8086301788756,21.6114713859922,20.6645867475848,29.9559919239422,21.9191893433484,19.3691011193797,14.4594592389813,18.1683309066584,33.2982678857767,31.7629570739473,21.1161757404845,19.9117707509944,34.7176309701623,40.8136801902414,30.5540229204555,24.2147552162234,23.6725063916824,16.2809824695979,34.8992380298405,31.0152719194708,24.3348303610578,16.8669773719998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| ||
|EntrezGene=445007 | |||
|HGNC= | |||
|MCL_coexpression_id=1044 | |||
|UniProt=Q8R480 | |||
|association_with_transcript=0bp_to_NM_001002929,uc007mhx.2_5end | |||
|description=CAGE_peak_1_at_Nup85_5end | |||
|id=chr11:115425751..115425804,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.08e-07!29;UBERON:0001048!9.94e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.08e-07,29;UBERON:0005057,4.08e-07,29 | |||
|phase1_expression=22.1005409004616,5.23463111459042,4.09499315450582,2.11724947914781,3.00537437967808,21.1527882608981,19.8570744506197,22.9839515726006,11.403886494285,14.7460651582856,37.4967350413856,33.1054459830646,25.8513102196121,25.2644962990902,65.2895133158699,59.9326791473885,81.149177862865,26.8142840554502,25.5032846506674,31.8292238848523,17.5189177711204,36.5390700419258,40.7471671056739,11.3594620183319,11.0116454912242,4.59385571292016,12.0613358924541,9.69620547086501,9.12112413390595,18.3981994724749,16.6297882991479,123.830981324628,114.40205049073,47.5445043046316,38.9949686664221,49.2054550261137,40.6297018962115,9.62622750694888,26.5654017138092,25.1291397107423,6.47054636834116,9.56263678941824,8.73918635456076,21.2765622378726,20.7822709000005,16.702754446713,17.2126095756569,15.4797861030117,12.5221124158649,13.8045228342741,18.3382212329225,18.6878333674463,27.0129995752956,21.035502118329,21.8460969442602,15.6928255981928,15.1862723167541,17.532851137433,22.659443616275,22.2176211294254,25.9870875437533,13.8926258148344,20.4537803105562,12.5985960419396,10.8775299882367,15.6305625288142,8.38880309451533,9.22123932771731,29.96629795715,30.9163598779572,29.6558195505449,19.1386159550548,20.9825113904033,31.6026261974581,32.4916146751821,29.4150011715207,23.1243350098716,19.1531007127782,16.2822925251618,21.8931237632122,23.6038120494217,30.2129754922921,20.1011759280994,23.0732670112989,18.7941844765476,20.6240009831567,18.5083185038834,21.9951346073855,25.0653699932839,21.4623230703271,20.2905142091174,18.0689014166091,12.2394840067395,16.7307989407723,14.9448576012964,9.40856462904405,15.7297750547562,19.4290567738986,22.6013824004496,25.7937889392548,17.4645840523084,21.815501160434,40.7688383530633,42.6640021891999,33.339620315727,33.443502242713,31.8480400359313,14.2729849648825,16.572024553419,17.3677302705845,34.1766093729288,23.748307308347,23.753396217374,24.7185130506301,20.8132011630198,22.2429866653526,8.89901883843746,10.4111536982336,32.7305904221453,27.8238981909544,37.7638996567273,29.0925151881133,11.1835056730873,30.1564220921894,29.7414323675106,14.5610521468897,37.7417642193649,29.395233818677,33.0382590389968,20.8208988772704,13.2675174817402,30.7853162676518,19.1206752211504,16.8772201838018,14.3373750746096,19.7934340942664,30.0426123358433,24.2593592689681,17.4378703319236,17.6771158944638,32.6602311836386,36.3245325004887,27.3694437304131,34.2099936487073,31.7730451036701,32.9252261132064,30.5467622064716,19.4027528054262,37.0776947844489,27.0421694639982,27.2724242454121,28.4954452155847,29.751055667139,28.2084254882955,23.0475992776897,34.8309966932363,40.0261516768544,38.0874902529778,36.941254921427,29.8261112451123,26.2669187178828,24.8485644816201,20.3600472603281,24.2020005049307,29.1564843357145,24.1835302540424,26.0225199357631,16.8142093008724,25.6713365865029,15.7600765515931,12.1603214318784,16.9591985413385,13.3925570327541,13.9574675510787,18.7158054222073,24.0796792967526,4.62586296177317,20.0982430664294,36.2590025909898,30.8874773574383,34.536479634321,23.5969723809311,16.6783532883653,15.7887269673424,18.506633400236,10.0466362381647,12.3154252312132,9.35095418593409,14.2323783596958,20.6728463990471,16.8587678902262,11.5501938487533,35.0885616763201,31.5325894802852,25.9227792048085,25.0491133249736,27.3473006906352,19.0769430101666,17.200338097798,10.6279306545314,16.0138702398202,10.6121560972748,11.858105083486,47.2171649176546,54.250282651244,44.522698252201,45.2378070696361,46.306014672464,37.4300002118687,24.7418678207697,21.4018499343047,35.6929837144506,20.1275489138296,16.0020607497456,23.7148631567066,20.2063102357689,18.477933592757,11.0962009913574,19.0295785871603,39.6037050600313,35.5263648643616,40.0598402429444,34.7341567466983,20.938282180227,15.9489239393629,12.8788207586147,20.1772984455924,15.723992965063,16.4238411717212,19.4997344511728,20.5495128420416,19.6722719670856,16.5870412333199,15.7732648307426,18.6870423747234,15.452457793065,16.0550589987792,16.4096361229084,23.7705670796179,13.1284882146274,32.1818383804582,29.6733445665445,25.4199609324703,25.8086301788756,21.6114713859922,20.6645867475848,29.9559919239422,21.9191893433484,19.3691011193797,14.4594592389813,18.1683309066584,33.2982678857767,31.7629570739473,21.1161757404845,19.9117707509944,34.7176309701623,40.8136801902414,30.5540229204555,24.2147552162234,23.6725063916824,16.2809824695979,34.8992380298405,31.0152719194708,24.3348303610578,16.8669773719998,19.5957532171555,23.4903327970114,31.5106914554793,27.941475697075,29.3641737993281,25.3596534108451,28.1822731811271,21.5559216988778,18.8768268451052,22.9978273902436,12.4980921809654,14.1138174755176,15.0046490176747,17.5996225098537,23.3411019471963,23.1582347366085,16.9065126737413,13.9910801582328,19.0988061070825,43.9138163650481,35.292154421711,36.8537109465726,58.7709585854636,53.9942199498049,44.6117437752719,26.0066997890599,20.7128149439014,24.0467954419697,14.3200592702267,35.42963128108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| |||
|short_description=p1@Nup85 | |||
}} | |||
Revision as of 18:46, 12 September 2013
| Short description: | p1@Nup85 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Nup85_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1044 |
| Association with transcript: | 0bp_to_NM_001002929, uc007mhx.2_5end |
| EntrezGene: | Nup85 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hemopoietic organ | 4.08e-07 | 29 |
| immune organ | 4.08e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
