FFCP PHASE1:Mm9::chr9:62384753..62384758,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=235431|HGNC=|MCL_coexpression_id=281|UniProt=|association_with_transcript=8bp_to_ENSMUST00000123379_5end|description=CAGE_peak_16_at_Coro2b_5end|id=chr9:62384753..62384758,-|ontology_enrichment_celltype=CL:0000221!1.95e-07!44;CL:0000133!1.95e-07!44;CL:0002319!4.42e-07!43;CL:0000540!5.95e-07!33;CL:0000047!5.95e-07!33;CL:0000031!5.95e-07!33;CL:0000404!5.95e-07!33|ontology_enrichment_celltype_v019_2=CL:0000878,1.29e-08,2;CL:0000129,1.29e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.53e-16!75;UBERON:0001016!4.53e-16!75;UBERON:0004121!1.69e-15!102;UBERON:0000924!1.69e-15!102;UBERON:0006601!1.69e-15!102;UBERON:0001017!7.05e-15!73;UBERON:0005743!7.05e-15!73;UBERON:0000033!4.55e-11!63;UBERON:0002346!8.93e-10!71;UBERON:0003075!8.93e-10!71;UBERON:0007284!8.93e-10!71;UBERON:0001049!2.72e-09!52;UBERON:0005068!2.72e-09!52;UBERON:0006241!2.72e-09!52;UBERON:0007135!2.72e-09!52;UBERON:0000955!5.41e-09!50;UBERON:0006238!5.41e-09!50;UBERON:0002616!2.09e-08!49;UBERON:0003056!1.21e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.06e-16,4;UBERON:0002680,8.06e-16,4;UBERON:0001895,8.06e-16,4;UBERON:0010092,8.06e-16,4;UBERON:0006215,8.06e-16,4;UBERON:0001851,1.86e-15,1;UBERON:0005889,1.86e-15,1;UBERON:0004733,6.82e-11,6;UBERON:0004732,6.82e-11,6;UBERON:0002028,6.82e-11,6;UBERON:0007277,6.82e-11,6;UBERON:0002021,9.74e-07,10;UBERON:0000411,9.74e-07,10;UBERON:0001950,9.74e-07,10|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,1.53687322128622,0,0.405017814995072,0.210324961351382,0.285650984403804,0,0,0,0,0,0.383062014255563,0.153606533256243,0.263772575460388,0,0,0.279182999001381,0,0.61119299110724,0,0.142371680799103,0.372798891650601,0.37863096666592,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,2.34224637609238,3.14170060220183,0,0,0,0,0.299581278809645,0,0.251308704225729,0.695297280769106,1.02286182932132,0.20778804455956,0,0.101839363850316,0,0,0,0,0.689706313300419,0,0.30140963567143,0.408218994907967,0.512454881139399,0.655912071918102,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0.315270288212382,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0.703270119553219,0,0,0,0,0,0.477937595905104,0.222798674082394,0.849229592366497,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0.608929898229199,0,0,0.220528398054962,0,0,0,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,1.38097570952153,0,0.343706364687375,0,0,0.675022500231806,0.900642406448441,0.453142408984205,1.03552062350364,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0,0.191288332068843,0,0|short_description=p16@Coro2b}} | ||
|EntrezGene=235431 | |||
|HGNC= | |||
|MCL_coexpression_id=281 | |||
|UniProt= | |||
|association_with_transcript=8bp_to_ENSMUST00000123379_5end | |||
|description=CAGE_peak_16_at_Coro2b_5end | |||
|id=chr9:62384753..62384758,- | |||
|ontology_enrichment_celltype=CL:0000221!1.95e-07!44;CL:0000133!1.95e-07!44;CL:0002319!4.42e-07!43;CL:0000540!5.95e-07!33;CL:0000047!5.95e-07!33;CL:0000031!5.95e-07!33;CL:0000404!5.95e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,1.29e-08,2;CL:0000129,1.29e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.53e-16!75;UBERON:0001016!4.53e-16!75;UBERON:0004121!1.69e-15!102;UBERON:0000924!1.69e-15!102;UBERON:0006601!1.69e-15!102;UBERON:0001017!7.05e-15!73;UBERON:0005743!7.05e-15!73;UBERON:0000033!4.55e-11!63;UBERON:0002346!8.93e-10!71;UBERON:0003075!8.93e-10!71;UBERON:0007284!8.93e-10!71;UBERON:0001049!2.72e-09!52;UBERON:0005068!2.72e-09!52;UBERON:0006241!2.72e-09!52;UBERON:0007135!2.72e-09!52;UBERON:0000955!5.41e-09!50;UBERON:0006238!5.41e-09!50;UBERON:0002616!2.09e-08!49;UBERON:0003056!1.21e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.06e-16,4;UBERON:0002680,8.06e-16,4;UBERON:0001895,8.06e-16,4;UBERON:0010092,8.06e-16,4;UBERON:0006215,8.06e-16,4;UBERON:0001851,1.86e-15,1;UBERON:0005889,1.86e-15,1;UBERON:0004733,6.82e-11,6;UBERON:0004732,6.82e-11,6;UBERON:0002028,6.82e-11,6;UBERON:0007277,6.82e-11,6;UBERON:0002021,9.74e-07,10;UBERON:0000411,9.74e-07,10;UBERON:0001950,9.74e-07,10 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,1.53687322128622,0,0.405017814995072,0.210324961351382,0.285650984403804,0,0,0,0,0,0.383062014255563,0.153606533256243,0.263772575460388,0,0,0.279182999001381,0,0.61119299110724,0,0.142371680799103,0.372798891650601,0.37863096666592,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,2.34224637609238,3.14170060220183,0,0,0,0,0.299581278809645,0,0.251308704225729,0.695297280769106,1.02286182932132,0.20778804455956,0,0.101839363850316,0,0,0,0,0.689706313300419,0,0.30140963567143,0.408218994907967,0.512454881139399,0.655912071918102,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0.315270288212382,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0.703270119553219,0,0,0,0,0,0.477937595905104,0.222798674082394,0.849229592366497,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0.608929898229199,0,0,0.220528398054962,0,0,0,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,1.38097570952153,0,0.343706364687375,0,0,0.675022500231806,0.900642406448441,0.453142408984205,1.03552062350364,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0,0.191288332068843,0,0 | |||
|short_description=p16@Coro2b | |||
}} |
Revision as of 18:28, 14 September 2013
Short description: | p16@Coro2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Coro2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:281 |
Association with transcript: | 8bp_to_ENSMUST00000123379_5end |
EntrezGene: | Coro2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 1.29e-08 | 2 |
microglial cell | 1.29e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.06e-16 | 4 |
regional part of metencephalon | 8.06e-16 | 4 |
metencephalon | 8.06e-16 | 4 |
future metencephalon | 8.06e-16 | 4 |
rhombic lip | 8.06e-16 | 4 |
cortex | 1.86e-15 | 1 |
zygote cortex | 1.86e-15 | 1 |
segmental subdivision of hindbrain | 6.82e-11 | 6 |
segmental subdivision of nervous system | 6.82e-11 | 6 |
hindbrain | 6.82e-11 | 6 |
presumptive hindbrain | 6.82e-11 | 6 |
occipital lobe | 9.74e-07 | 10 |
visual cortex | 9.74e-07 | 10 |
neocortex | 9.74e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.