FFCP PHASE1:Mm9::chr19:26681226..26681299,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67155|HGNC=|MCL_coexpression_id=177|UniProt=E9QAB8|association_with_transcript=-460bp_to_ENSMUST00000099537_5end|description=CAGE_peak_7_at_Smarca2_5end|id=chr19:26681226..26681299,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.41e-10!51|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.19e-10,51|phase1_expression=2.08193501236232,1.04692622291808,2.72999543633722,0,0.500895729946347,4.02910252588535,3.03696432774183,0.645616617207881,0.563154888606667,0.468129052643987,0,0,1.19840510951844,0.437102012094987,3.33109761815663,2.63217847606774,0.699561878128147,8.83294063003066,16.1795031654772,9.33657233955666,2.38121212422995,0.297872853602656,0.261199789138935,2.55987876469451,2.52350209173887,2.29692785646008,4.30761996159075,3.01659725760245,0.380046838912748,0.504060259519861,2.88249663851896,0.635030673459631,0,0,0.288851619751275,1.16364251750945,0.408338712524738,16.7412652294763,9.37602413428561,7.32933241563318,25.2939539853336,23.2235464885872,13.1087795318411,5.41356317294982,5.47435428585379,1.83546752161682,6.25913075478431,0,0.878744730937887,0.972149495371417,0.279972843250725,0,8.22134769682908,0,0.672187598284928,0.514518872071894,0.286533439938757,1.54701627683233,0.202316460859598,1.05798195854407,0.633831403506179,0,0.889294796111139,1.3498495759221,1.97773272513395,2.8419204597844,0.898800331555214,1.15265491596466,0.103689612308478,0.405017814995072,0.420649922702764,1.99955689082663,0.883474163806454,0.244981598429908,0.287536413054709,1.83843757322004,1.10115880999389,3.95830748064082,3.99376986466233,0.659431438650969,0.640413505216868,0.52091337055676,1.11673199600552,1.68828783009504,1.37518422999129,2.65165726926301,1.28134512719193,1.1183966749518,0,0.0755715601067855,1.44932244350839,5.16254326188832,2.719885334831,9.17495425784289,6.49776417447669,17.9210754838934,6.74133216632409,0.511290967734173,0,0,0.281686839553361,0,0,0,0.432982082022428,0,0.505524445014783,5.48082622651488,9.32176381129818,2.07818994690755,1.04091196059682,1.52232739156071,0.922461989024234,0.60289056221049,1.05829836422134,1.25666591329675,1.23597483867187,3.47038456607788,3.5384422077995,0.647067399789637,1.98757366614354,1.45462575940567,1.86391761218122,2.92780797011547,3.14170060220183,1.53274233125155,1.67741174308288,1.19980546198682,1.90605340609597,3.44518470631092,2.28750301409313,0.376963056338593,5.56237824615285,5.62574006126727,3.74018480207208,3.56930778749067,2.13862664085664,3.4833951770826,3.53811861807145,4.41927897361595,0.130120442962704,0.689706313300419,0,0.150704817835715,0.340182495756639,1.0249097622788,0.0937017245597288,2.06962696591213,0.431135985865684,1.32374256117473,1.75951124163949,1.09597866213787,3.33656699070717,1.74126083261083,2.46938563689532,0.796137067273973,1.40442637462647,1.02939162845886,3.6941254921427,0,0,0.180062061461015,0,0.787056926989615,1.23413690309903,0.930135779001631,0.268273401399619,1.05088808130453,0.987359099480883,1.80584210487005,2.10778904819225,1.31579988682799,1.53685080703735,3.48936688776967,2.94405927989778,0.308713837137853,0.660837565967596,0.793351699990633,0.853153002140936,0.696710015581316,1.28867461322093,0.80673409849337,0.889512175379481,1.14135375667535,0.474529061544512,0.823494773620054,2.26201687920243,1.59165177632921,0.779856348476481,2.69645822596266,1.51296634912286,1.99141273254367,0.189667900953082,0.114248512609729,2.25415471346161,0.203651327845314,0.387904974335251,0.771494018793504,0.569128834118316,1.91893192373483,0.784993639206874,1.23397163921801,16.008441862706,0.166845105716094,0.393117990226406,1.12431056192427,0.202860121388503,0.482354319504834,0.763877555344259,0.575392274901621,2.7562988551756,0.823684239564244,4.31304619582064,1.48856379067401,4.05648975048929,2.77836765741823,4.30553792452589,4.3419916922703,9.23765950833023,0.568474235311454,0.162964976442026,0.848725428875941,1.64283173801951,2.34508760418542,3.80869825417622,3.90267295715598,2.83743259391144,2.87904096543407,3.50800491046472,7.70157579163969,8.11619414769709,7.66640010482011,4.52373851817817,1.08781136763742,2.95058563811422,2.75936746304733,3.53211297973142,2.93029216480508,0.491804836130026,0.504941854408746,0,0,0.430846795465598,0,0,0,0.404810701674894,0.292255857911312,0,1.92792789853084,1.84522110770749,2.67098405500883,1.46598263418218,3.95928295134085,2.65490276679926,0,0.906970670894253,1.50884063804718,0.590603785761546,2.15204603560749,1.55056975900933,1.81766864738753,2.49548164869305,3.47640433729398,2.10837217149998,4.12542172992747,6.80879211507576,0.18006109403131,0.388076051348264,0.643011105094777,0.709360934569094,0.891844088010353,1.15184314421485,1.8267896946876,1.40803024838226,1.48282449604674,4.19003956304428,2.96795255294664,0.968786560175433,1.62844897306021,1.19372344003136,0.984845398470368,1.1659233465194,5.19190845629427,2.9048049735635,1.44470807574256,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| ||
|EntrezGene=67155 | |||
|HGNC= | |||
|MCL_coexpression_id=177 | |||
|UniProt=E9QAB8 | |||
|association_with_transcript=-460bp_to_ENSMUST00000099537_5end | |||
|description=CAGE_peak_7_at_Smarca2_5end | |||
|id=chr19:26681226..26681299,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.41e-10!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.19e-10,51 | |||
|phase1_expression=2.08193501236232,1.04692622291808,2.72999543633722,0,0.500895729946347,4.02910252588535,3.03696432774183,0.645616617207881,0.563154888606667,0.468129052643987,0,0,1.19840510951844,0.437102012094987,3.33109761815663,2.63217847606774,0.699561878128147,8.83294063003066,16.1795031654772,9.33657233955666,2.38121212422995,0.297872853602656,0.261199789138935,2.55987876469451,2.52350209173887,2.29692785646008,4.30761996159075,3.01659725760245,0.380046838912748,0.504060259519861,2.88249663851896,0.635030673459631,0,0,0.288851619751275,1.16364251750945,0.408338712524738,16.7412652294763,9.37602413428561,7.32933241563318,25.2939539853336,23.2235464885872,13.1087795318411,5.41356317294982,5.47435428585379,1.83546752161682,6.25913075478431,0,0.878744730937887,0.972149495371417,0.279972843250725,0,8.22134769682908,0,0.672187598284928,0.514518872071894,0.286533439938757,1.54701627683233,0.202316460859598,1.05798195854407,0.633831403506179,0,0.889294796111139,1.3498495759221,1.97773272513395,2.8419204597844,0.898800331555214,1.15265491596466,0.103689612308478,0.405017814995072,0.420649922702764,1.99955689082663,0.883474163806454,0.244981598429908,0.287536413054709,1.83843757322004,1.10115880999389,3.95830748064082,3.99376986466233,0.659431438650969,0.640413505216868,0.52091337055676,1.11673199600552,1.68828783009504,1.37518422999129,2.65165726926301,1.28134512719193,1.1183966749518,0,0.0755715601067855,1.44932244350839,5.16254326188832,2.719885334831,9.17495425784289,6.49776417447669,17.9210754838934,6.74133216632409,0.511290967734173,0,0,0.281686839553361,0,0,0,0.432982082022428,0,0.505524445014783,5.48082622651488,9.32176381129818,2.07818994690755,1.04091196059682,1.52232739156071,0.922461989024234,0.60289056221049,1.05829836422134,1.25666591329675,1.23597483867187,3.47038456607788,3.5384422077995,0.647067399789637,1.98757366614354,1.45462575940567,1.86391761218122,2.92780797011547,3.14170060220183,1.53274233125155,1.67741174308288,1.19980546198682,1.90605340609597,3.44518470631092,2.28750301409313,0.376963056338593,5.56237824615285,5.62574006126727,3.74018480207208,3.56930778749067,2.13862664085664,3.4833951770826,3.53811861807145,4.41927897361595,0.130120442962704,0.689706313300419,0,0.150704817835715,0.340182495756639,1.0249097622788,0.0937017245597288,2.06962696591213,0.431135985865684,1.32374256117473,1.75951124163949,1.09597866213787,3.33656699070717,1.74126083261083,2.46938563689532,0.796137067273973,1.40442637462647,1.02939162845886,3.6941254921427,0,0,0.180062061461015,0,0.787056926989615,1.23413690309903,0.930135779001631,0.268273401399619,1.05088808130453,0.987359099480883,1.80584210487005,2.10778904819225,1.31579988682799,1.53685080703735,3.48936688776967,2.94405927989778,0.308713837137853,0.660837565967596,0.793351699990633,0.853153002140936,0.696710015581316,1.28867461322093,0.80673409849337,0.889512175379481,1.14135375667535,0.474529061544512,0.823494773620054,2.26201687920243,1.59165177632921,0.779856348476481,2.69645822596266,1.51296634912286,1.99141273254367,0.189667900953082,0.114248512609729,2.25415471346161,0.203651327845314,0.387904974335251,0.771494018793504,0.569128834118316,1.91893192373483,0.784993639206874,1.23397163921801,16.008441862706,0.166845105716094,0.393117990226406,1.12431056192427,0.202860121388503,0.482354319504834,0.763877555344259,0.575392274901621,2.7562988551756,0.823684239564244,4.31304619582064,1.48856379067401,4.05648975048929,2.77836765741823,4.30553792452589,4.3419916922703,9.23765950833023,0.568474235311454,0.162964976442026,0.848725428875941,1.64283173801951,2.34508760418542,3.80869825417622,3.90267295715598,2.83743259391144,2.87904096543407,3.50800491046472,7.70157579163969,8.11619414769709,7.66640010482011,4.52373851817817,1.08781136763742,2.95058563811422,2.75936746304733,3.53211297973142,2.93029216480508,0.491804836130026,0.504941854408746,0,0,0.430846795465598,0,0,0,0.404810701674894,0.292255857911312,0,1.92792789853084,1.84522110770749,2.67098405500883,1.46598263418218,3.95928295134085,2.65490276679926,0,0.906970670894253,1.50884063804718,0.590603785761546,2.15204603560749,1.55056975900933,1.81766864738753,2.49548164869305,3.47640433729398,2.10837217149998,4.12542172992747,6.80879211507576,0.18006109403131,0.388076051348264,0.643011105094777,0.709360934569094,0.891844088010353,1.15184314421485,1.8267896946876,1.40803024838226,1.48282449604674,4.19003956304428,2.96795255294664,0.968786560175433,1.62844897306021,1.19372344003136,0.984845398470368,1.1659233465194,5.19190845629427,2.9048049735635,1.44470807574256,1.48155621895769,1.13021074202815,3.69074414846768,2.51655990527175,3.90950388985867,3.35883485576779,4.28419918793714,0.954670618015114,0.632671987162271,1.01659733563424,0.86404272657441,1.04544148007234,1.52853794622324,0.944050424693745,1.73572257023205,1.57053565190418,1.29614973291793,6.21339313086926,2.25477175473676,0.149516546043979,0.165458490457098,0.583353565032143,0.387479470433193,0.675824501963113,0.938857909166032,1.69265700297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| |||
|short_description=p7@Smarca2 | |||
}} | |||
Revision as of 17:17, 13 September 2013
| Short description: | p7@Smarca2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_7_at_Smarca2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:177 |
| Association with transcript: | -460bp_to_ENSMUST00000099537_5end |
| EntrezGene: | Smarca2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 2.19e-10 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
