FFCP PHASE1:Mm9::chr6:78320646..78320664,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18489|HGNC=|UniProt=P35230,E9PXT3|association_with_transcript=-214bp_to_ENSMUST00000096904,ENSMUST00000164851,NM_011036,uc009cjw.1_5end|description=CAGE_peak_2_at_Reg3b_5end|id=chr6:78320646..78320664,+|ontology_enrichment_celltype=CL:0000239!5.09e-15!6;CL:0000677!5.09e-15!6;CL:0000212!5.09e-15!6;CL:0000584!5.09e-15!6;CL:0000075!8.76e-13!7;CL:0002563!8.46e-10!9;CL:0002251!8.46e-10!9;CL:0000473!1.05e-08!3;CL:0000627!1.05e-08!3;CL:0000682!1.05e-08!3;CL:0000066!6.13e-07!25|ontology_enrichment_celltype_v019_2=CL:0000682,1.84e-13,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.52e-39!43;UBERON:0005409!3.04e-27!59;UBERON:0000344!1.31e-23!15;UBERON:0001242!6.23e-19!13;UBERON:0000060!6.23e-19!13;UBERON:0001262!6.23e-19!13;UBERON:0004786!6.23e-19!13;UBERON:0002108!1.47e-15!16;UBERON:0004923!8.87e-14!24;UBERON:0001007!1.53e-11!128;UBERON:0001555!1.53e-11!128;UBERON:0007026!1.53e-11!128;UBERON:0004119!2.87e-11!130;UBERON:0000925!2.87e-11!130;UBERON:0006595!2.87e-11!130;UBERON:0003350!8.46e-10!9;UBERON:0004808!8.46e-10!9;UBERON:0001277!8.46e-10!9;UBERON:0004921!1.25e-09!126;UBERON:0004185!1.25e-09!126;UBERON:0000331!1.47e-09!3;UBERON:0002116!1.47e-09!3;UBERON:0001204!1.47e-09!3;UBERON:0001168!1.47e-09!3;UBERON:0001045!2.44e-09!13;UBERON:0000485!6.74e-08!11;UBERON:0001264!1.40e-07!12;UBERON:0003922!1.40e-07!12;UBERON:0002114!1.40e-07!12;UBERON:0003923!1.40e-07!12;UBERON:0003924!1.40e-07!12;UBERON:0003921!1.40e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.26e-18,4;UBERON:0000160,7.46e-16,31;UBERON:0000331,6.91e-15,3;UBERON:0002116,6.91e-15,3;UBERON:0001204,6.91e-15,3;UBERON:0001168,6.91e-15,3;UBERON:0000344,2.78e-14,15;UBERON:0001155,6.34e-10,2;UBERON:0000059,6.34e-10,2;UBERON:0005409,7.23e-10,47;UBERON:0001962,9.54e-10,2;UBERON:0001961,9.54e-10,2;UBERON:0001744,9.54e-10,2;UBERON:0001242,7.51e-09,13;UBERON:0001262,7.51e-09,13;UBERON:0004786,7.51e-09,13;UBERON:0004923,1.23e-08,24;UBERON:0002465,8.98e-07,3|phase1_expression=0,0.348975407639361,0.909998478779072,2.11724947914781,3.00537437967808,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,2.06468352960453,1.72269589234506,2.15380998079537,1.50829862880122,15.5819203954227,7.30887376303799,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.793351699990633,0,0,0,0.403367049246685,0,0.190225626112559,4.2707615539006,0,0,0,0.19496408711912,0.898819408654221,1.29682829924817,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98235415019888,0,0,0,0,0.307435147943927,0,0,0.356497378384721,2.21225730555071,37.9506990869996,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p2@Reg3b}} | ||
|EntrezGene=18489 | |||
|HGNC= | |||
|UniProt=P35230,E9PXT3 | |||
|association_with_transcript=-214bp_to_ENSMUST00000096904,ENSMUST00000164851,NM_011036,uc009cjw.1_5end | |||
|description=CAGE_peak_2_at_Reg3b_5end | |||
|id=chr6:78320646..78320664,+ | |||
|ontology_enrichment_celltype=CL:0000239!5.09e-15!6;CL:0000677!5.09e-15!6;CL:0000212!5.09e-15!6;CL:0000584!5.09e-15!6;CL:0000075!8.76e-13!7;CL:0002563!8.46e-10!9;CL:0002251!8.46e-10!9;CL:0000473!1.05e-08!3;CL:0000627!1.05e-08!3;CL:0000682!1.05e-08!3;CL:0000066!6.13e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.84e-13,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.52e-39!43;UBERON:0005409!3.04e-27!59;UBERON:0000344!1.31e-23!15;UBERON:0001242!6.23e-19!13;UBERON:0000060!6.23e-19!13;UBERON:0001262!6.23e-19!13;UBERON:0004786!6.23e-19!13;UBERON:0002108!1.47e-15!16;UBERON:0004923!8.87e-14!24;UBERON:0001007!1.53e-11!128;UBERON:0001555!1.53e-11!128;UBERON:0007026!1.53e-11!128;UBERON:0004119!2.87e-11!130;UBERON:0000925!2.87e-11!130;UBERON:0006595!2.87e-11!130;UBERON:0003350!8.46e-10!9;UBERON:0004808!8.46e-10!9;UBERON:0001277!8.46e-10!9;UBERON:0004921!1.25e-09!126;UBERON:0004185!1.25e-09!126;UBERON:0000331!1.47e-09!3;UBERON:0002116!1.47e-09!3;UBERON:0001204!1.47e-09!3;UBERON:0001168!1.47e-09!3;UBERON:0001045!2.44e-09!13;UBERON:0000485!6.74e-08!11;UBERON:0001264!1.40e-07!12;UBERON:0003922!1.40e-07!12;UBERON:0002114!1.40e-07!12;UBERON:0003923!1.40e-07!12;UBERON:0003924!1.40e-07!12;UBERON:0003921!1.40e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.26e-18,4;UBERON:0000160,7.46e-16,31;UBERON:0000331,6.91e-15,3;UBERON:0002116,6.91e-15,3;UBERON:0001204,6.91e-15,3;UBERON:0001168,6.91e-15,3;UBERON:0000344,2.78e-14,15;UBERON:0001155,6.34e-10,2;UBERON:0000059,6.34e-10,2;UBERON:0005409,7.23e-10,47;UBERON:0001962,9.54e-10,2;UBERON:0001961,9.54e-10,2;UBERON:0001744,9.54e-10,2;UBERON:0001242,7.51e-09,13;UBERON:0001262,7.51e-09,13;UBERON:0004786,7.51e-09,13;UBERON:0004923,1.23e-08,24;UBERON:0002465,8.98e-07,3 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,2.11724947914781,3.00537437967808,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,2.06468352960453,1.72269589234506,2.15380998079537,1.50829862880122,15.5819203954227,7.30887376303799,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.793351699990633,0,0,0,0.403367049246685,0,0.190225626112559,4.2707615539006,0,0,0,0.19496408711912,0.898819408654221,1.29682829924817,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98235415019888,0,0,0,0,0.307435147943927,0,0,0.356497378384721,2.21225730555071,37.9506990869996,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p2@Reg3b | |||
}} |
Revision as of 10:39, 14 September 2013
Short description: | p2@Reg3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Reg3b_5end |
Coexpression cluster: | NA |
Association with transcript: | -214bp_to_ENSMUST00000096904, ENSMUST00000164851, NM_011036, uc009cjw.1_5end |
EntrezGene: | Reg3b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.84e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.26e-18 | 4 |
intestine | 7.46e-16 | 31 |
ileal mucosa | 6.91e-15 | 3 |
ileum | 6.91e-15 | 3 |
mucosa of small intestine | 6.91e-15 | 3 |
wall of small intestine | 6.91e-15 | 3 |
mucosa | 2.78e-14 | 15 |
colon | 6.34e-10 | 2 |
large intestine | 6.34e-10 | 2 |
gastrointestinal system | 7.23e-10 | 47 |
gut-associated lymphoid tissue | 9.54e-10 | 2 |
mucosa-associated lymphoid tissue | 9.54e-10 | 2 |
lymphoid tissue | 9.54e-10 | 2 |
intestinal mucosa | 7.51e-09 | 13 |
wall of intestine | 7.51e-09 | 13 |
gastrointestinal system mucosa | 7.51e-09 | 13 |
organ component layer | 1.23e-08 | 24 |
lymphoid system | 8.98e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.