FFCP PHASE1:Mm9::chr5:99372805..99372824,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19092|HGNC=|MCL_coexpression_id=1412|UniProt=Q3TMJ2|association_with_transcript=0bp_to_uc008ygi.2_5end|description=CAGE_peak_5_at_Prkg2_5end|id=chr5:99372805..99372824,-|ontology_enrichment_celltype=CL:0000680!3.89e-13!6;CL:0000183!3.89e-13!6;CL:0000187!3.89e-13!6;CL:0000056!3.89e-13!6;CL:0000222!3.89e-11!7;CL:0000355!1.81e-08!9;CL:0000068!7.28e-08!3;CL:0002202!7.28e-08!3;CL:0000069!7.28e-08!3;CL:0002632!7.28e-08!3;CL:0002368!7.28e-08!3;CL:0000307!7.28e-08!3;CL:0000377!7.28e-08!3;CL:0000192!1.70e-07!3;CL:0000359!1.70e-07!3;CL:0002539!1.70e-07!3;CL:0000514!1.70e-07!3;CL:0002494!3.04e-07!3;CL:0000737!3.04e-07!3;CL:0000746!3.04e-07!3;CL:0000513!3.04e-07!3|ontology_enrichment_celltype_v019_2=CL:0000068,8.55e-27,3;CL:0002202,8.55e-27,3;CL:0000069,8.55e-27,3;CL:0002632,8.55e-27,3;CL:0002368,8.55e-27,3;CL:0000307,8.55e-27,3;CL:0000377,8.55e-27,3;CL:0000217,5.31e-18,2;CL:0000328,5.31e-18,2;CL:0002573,5.31e-18,2;CL:0002376,5.31e-18,2;CL:0000218,5.31e-18,2;CL:0000692,5.31e-18,2;CL:0002377,5.31e-18,2;CL:0002375,5.31e-18,2;CL:0000215,2.42e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000383!5.14e-10!10;UBERON:0000014!2.93e-09!5;UBERON:0001003!2.93e-09!5;UBERON:0002097!2.93e-09!5;UBERON:0002199!2.93e-09!5;UBERON:0007029!2.93e-09!5;UBERON:0007376!2.93e-09!5;UBERON:0002416!2.93e-09!5;UBERON:0007383!2.93e-09!5;UBERON:0000914!9.23e-09!17;UBERON:0001134!1.81e-08!9;UBERON:0002036!1.81e-08!9;UBERON:0002385!1.81e-08!9;UBERON:0000486!1.81e-08!9;UBERON:0001015!1.81e-08!9;UBERON:0004290!1.81e-08!9;UBERON:0003082!1.81e-08!9;UBERON:0003126!7.28e-08!3;UBERON:0001005!7.28e-08!3;UBERON:0007196!7.28e-08!3;UBERON:0001558!7.28e-08!3;UBERON:0001135!1.70e-07!3;UBERON:0004237!1.70e-07!3;UBERON:0004695!1.70e-07!3;UBERON:0002111!1.70e-07!3;UBERON:0004178!1.70e-07!3;UBERON:0002329!8.96e-07!11;UBERON:0003077!8.96e-07!11;UBERON:0003059!8.96e-07!11;UBERON:0007282!8.96e-07!11;UBERON:0009618!8.96e-07!11;UBERON:0007285!8.96e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0003126,8.55e-27,3;UBERON:0001005,8.55e-27,3;UBERON:0007196,8.55e-27,3;UBERON:0001558,8.55e-27,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,1.21652317463417,0.734187008646726,0,0,0,0,0.139986421625363,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,1.51452386666368,1.5870027622425,0,0,0,0,0,0,0,6.30592193538814,6.75443611967459,4.24007489412408,0,0,0,0,2.81438353314578,1.77351905832569,2.02209778005913,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0492343191742,0.252470927204373,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.358117032009409,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0.191288332068843,0,0.231867835620421|short_description=p5@Prkg2}} | ||
|EntrezGene=19092 | |||
|HGNC= | |||
|MCL_coexpression_id=1412 | |||
|UniProt=Q3TMJ2 | |||
|association_with_transcript=0bp_to_uc008ygi.2_5end | |||
|description=CAGE_peak_5_at_Prkg2_5end | |||
|id=chr5:99372805..99372824,- | |||
|ontology_enrichment_celltype=CL:0000680!3.89e-13!6;CL:0000183!3.89e-13!6;CL:0000187!3.89e-13!6;CL:0000056!3.89e-13!6;CL:0000222!3.89e-11!7;CL:0000355!1.81e-08!9;CL:0000068!7.28e-08!3;CL:0002202!7.28e-08!3;CL:0000069!7.28e-08!3;CL:0002632!7.28e-08!3;CL:0002368!7.28e-08!3;CL:0000307!7.28e-08!3;CL:0000377!7.28e-08!3;CL:0000192!1.70e-07!3;CL:0000359!1.70e-07!3;CL:0002539!1.70e-07!3;CL:0000514!1.70e-07!3;CL:0002494!3.04e-07!3;CL:0000737!3.04e-07!3;CL:0000746!3.04e-07!3;CL:0000513!3.04e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,8.55e-27,3;CL:0002202,8.55e-27,3;CL:0000069,8.55e-27,3;CL:0002632,8.55e-27,3;CL:0002368,8.55e-27,3;CL:0000307,8.55e-27,3;CL:0000377,8.55e-27,3;CL:0000217,5.31e-18,2;CL:0000328,5.31e-18,2;CL:0002573,5.31e-18,2;CL:0002376,5.31e-18,2;CL:0000218,5.31e-18,2;CL:0000692,5.31e-18,2;CL:0002377,5.31e-18,2;CL:0002375,5.31e-18,2;CL:0000215,2.42e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000383!5.14e-10!10;UBERON:0000014!2.93e-09!5;UBERON:0001003!2.93e-09!5;UBERON:0002097!2.93e-09!5;UBERON:0002199!2.93e-09!5;UBERON:0007029!2.93e-09!5;UBERON:0007376!2.93e-09!5;UBERON:0002416!2.93e-09!5;UBERON:0007383!2.93e-09!5;UBERON:0000914!9.23e-09!17;UBERON:0001134!1.81e-08!9;UBERON:0002036!1.81e-08!9;UBERON:0002385!1.81e-08!9;UBERON:0000486!1.81e-08!9;UBERON:0001015!1.81e-08!9;UBERON:0004290!1.81e-08!9;UBERON:0003082!1.81e-08!9;UBERON:0003126!7.28e-08!3;UBERON:0001005!7.28e-08!3;UBERON:0007196!7.28e-08!3;UBERON:0001558!7.28e-08!3;UBERON:0001135!1.70e-07!3;UBERON:0004237!1.70e-07!3;UBERON:0004695!1.70e-07!3;UBERON:0002111!1.70e-07!3;UBERON:0004178!1.70e-07!3;UBERON:0002329!8.96e-07!11;UBERON:0003077!8.96e-07!11;UBERON:0003059!8.96e-07!11;UBERON:0007282!8.96e-07!11;UBERON:0009618!8.96e-07!11;UBERON:0007285!8.96e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,8.55e-27,3;UBERON:0001005,8.55e-27,3;UBERON:0007196,8.55e-27,3;UBERON:0001558,8.55e-27,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,1.21652317463417,0.734187008646726,0,0,0,0,0.139986421625363,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,1.51452386666368,1.5870027622425,0,0,0,0,0,0,0,6.30592193538814,6.75443611967459,4.24007489412408,0,0,0,0,2.81438353314578,1.77351905832569,2.02209778005913,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0492343191742,0.252470927204373,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.358117032009409,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p5@Prkg2 | |||
}} |
Revision as of 08:24, 14 September 2013
Short description: | p5@Prkg2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Prkg2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1412 |
Association with transcript: | 0bp_to_uc008ygi.2_5end |
EntrezGene: | Prkg2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 8.55e-27 | 3 |
epithelial cell of tracheobronchial tree | 8.55e-27 | 3 |
branched duct epithelial cell | 8.55e-27 | 3 |
epithelial cell of lower respiratory tract | 8.55e-27 | 3 |
respiratory epithelial cell | 8.55e-27 | 3 |
tracheal epithelial cell | 8.55e-27 | 3 |
tracheoblast | 8.55e-27 | 3 |
insulating cell | 5.31e-18 | 2 |
myelin accumulating cell | 5.31e-18 | 2 |
Schwann cell | 5.31e-18 | 2 |
non-myelinating Schwann cell | 5.31e-18 | 2 |
myelinating Schwann cell;;Schwann cell | 5.31e-18 | 2 |
terminal Schwann cell | 5.31e-18 | 2 |
immature Schwann cell | 5.31e-18 | 2 |
Schwann cell precursor | 5.31e-18 | 2 |
barrier cell | 2.42e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 8.55e-27 | 3 |
respiratory airway | 8.55e-27 | 3 |
tracheobronchial tree | 8.55e-27 | 3 |
lower respiratory tract | 8.55e-27 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.