FFCP PHASE1:Hg19::chr1:26219059..26219082,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3925|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6510|TSSclassifier=S|UniProt=|association_with_transcript=15bp_to_ENST00000513116,uc001bky.2_5end|description=CAGE_peak_10_at_STMN1_5end|id=chr1:26219059..26219082,-|ontology_enrichment_celltype=CL:0000057!1.16e-14!75;CL:0000055!8.99e-14!180;CL:0000548!1.04e-09!679;CL:0000004!1.04e-09!679;CL:0000255!1.04e-09!679;CL:0000012!2.70e-09!682;CL:0002620!1.45e-08!23;CL:0000680!4.73e-07!57;CL:0000056!4.73e-07!57;CL:0000355!4.73e-07!57|ontology_enrichment_celltype_v019=CL:0000197;9.12e-09;6!CL:0000098;9.12e-09;6!CL:0002167;9.12e-09;6!CL:0002620;1.20e-08;23|ontology_enrichment_celltype_v019_2=CL:0000057,4.54e-11,76;CL:0000197,6.65e-09,6;CL:0000098,6.65e-09,6;CL:0002167,6.65e-09,6;CL:0002620,3.59e-08,23|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;4.22e-07;5!DOID:450;4.22e-07;5!DOID:66;4.22e-07;5!DOID:423;4.22e-07;5!DOID:0080000;4.22e-07;5!DOID:11722;4.22e-07;5|ontology_enrichment_disease_v019_2=DOID:17,8.83e-07,5;DOID:450,8.83e-07,5;DOID:66,8.83e-07,5;DOID:423,8.83e-07,5;DOID:0080000,8.83e-07,5;DOID:11722,8.83e-07,5|ontology_enrichment_uberon=UBERON:0002100!1.97e-10!216;UBERON:0003102!3.37e-10!95;UBERON:0000914!1.69e-09!83;UBERON:0002329!1.69e-09!83;UBERON:0003077!1.69e-09!83;UBERON:0003059!1.69e-09!83;UBERON:0007282!1.69e-09!83;UBERON:0009618!1.69e-09!83;UBERON:0007285!1.69e-09!83;UBERON:0000486!4.76e-09!82;UBERON:0000475!3.48e-08!365;UBERON:0005256!5.88e-08!143;UBERON:0004923!9.66e-08!57;UBERON:0002199!1.12e-07!45;UBERON:0002416!1.12e-07!45;UBERON:0003104!2.35e-07!238;UBERON:0009142!2.35e-07!238;UBERON:0002097!3.26e-07!40;UBERON:0004290!3.31e-07!70|ontology_enrichment_uberon_v019=UBERON:0002097;7.84e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.21e-07,41;UBERON:0002199,1.37e-07,46;UBERON:0002416,1.37e-07,46|phase1_expression=1.09007027562334,1.49870366723688,1.12763523276777,1.0007329835313,0.893922188854576,1.74467704820074,2.53299878168311,0,0,0.491467873003018,1.39560233594486,1.09220686065086,0.527533956456907,0.866364470720326,0.662794751455832,0,0,0,0.487932798790507,0.123121058076788,0.612002073732759,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.44575660953827,0.50133791063589,0.724232594804119,0,0,0.189069634328136,0,0.087834785693126,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,1.98788780678127,0.12663051166458,0.397227542439656,1.43418310374407,0.354668382198357,0.560677600142307,0,0,0,0,0.326923806226917,0.151357427644931,0,0.468642863667593,0.936480230490962,0.570471821544449,0.747243402759005,0,0.485618833104395,0.140450806702248,1.42907919878425,0.61417158655884,0.723280468230358,0,0.494533858557114,1.82032272387605,1.43723628363248,0,0.125118519871964,1.38532057742091,1.31693286264251,1.22595118319608,0.600952235626387,0.453728732640084,1.07633781413317,1.06778694409284,2.54318281391474,0.600182192168805,1.44273540933814,0.772921620136887,1.67505170698431,1.0126579934476,1.26668106709558,0.504867548488229,1.38074847963449,0.969876340912871,1.06502877754984,1.41052937518696,1.01736355386293,0.773043412653187,0.818238361772504,0.860413786167011,0,0,0,0.10366105501537,0,0,1.56449532329816,0,1.38134921352481,0.464367928031979,2.88751792667834,0.236613600079688,0.337169380156203,0,0.330881918197182,0.435758888184812,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,1.2347220339942,0,0,0,0,0,0.860919069801795,0.343135620597051,0,0,0.402115889646523,0.462942225792648,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0.93733833986777,2.51973192298289,0.567100388969546,0.806026704325635,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0.36669142910475,0.775630294546667,0,0.845302752556,1.06375246633948,1.04007436911366,1.54324424557285,0,0.266422179016099,0.285955987316295,0.542621605391443,0.823240336780769,0,0,0,1.20575750823834,1.74306691720059,0.99972991182057,0,0,0,0.718874566474748,0,0,0.434343920002738,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.542530047399471,1.66376689224646,1.78428988797162,2.36553622550902,1.17141414992713,1.20378439891088,4.5481500811197,0,0,0,1.99832313276591,0.195801157462741,0.686286847621712,0,0,0,0,3.32870879020994,0.604780586659361,0.744323423456331,0.920771839728375,1.68396056659844,1.28139149255701,1.02341449813341,0.804269605718038,0,0.771048469013278,0.887808626565635,0.410635780069046,1.03850885836724,1.51073491997947,0.846016147141356,1.00253235151642,0.644566922551274,0.229628896329213,0.546273504020151,0.524497659837696,0.451199612907412,0.385076685522074,0.784349769176855,2.92278449306521,0.105551628892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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6510 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=15bp_to_ENST00000513116,uc001bky.2_5end | |||
|description=CAGE_peak_10_at_STMN1_5end | |||
|id=chr1:26219059..26219082,- | |||
|ontology_enrichment_celltype=CL:0000057!1.16e-14!75;CL:0000055!8.99e-14!180;CL:0000548!1.04e-09!679;CL:0000004!1.04e-09!679;CL:0000255!1.04e-09!679;CL:0000012!2.70e-09!682;CL:0002620!1.45e-08!23;CL:0000680!4.73e-07!57;CL:0000056!4.73e-07!57;CL:0000355!4.73e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000197;9.12e-09;6!CL:0000098;9.12e-09;6!CL:0002167;9.12e-09;6!CL:0002620;1.20e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.54e-11,76;CL:0000197,6.65e-09,6;CL:0000098,6.65e-09,6;CL:0002167,6.65e-09,6;CL:0002620,3.59e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.22e-07;5!DOID:450;4.22e-07;5!DOID:66;4.22e-07;5!DOID:423;4.22e-07;5!DOID:0080000;4.22e-07;5!DOID:11722;4.22e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.83e-07,5;DOID:450,8.83e-07,5;DOID:66,8.83e-07,5;DOID:423,8.83e-07,5;DOID:0080000,8.83e-07,5;DOID:11722,8.83e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002100!1.97e-10!216;UBERON:0003102!3.37e-10!95;UBERON:0000914!1.69e-09!83;UBERON:0002329!1.69e-09!83;UBERON:0003077!1.69e-09!83;UBERON:0003059!1.69e-09!83;UBERON:0007282!1.69e-09!83;UBERON:0009618!1.69e-09!83;UBERON:0007285!1.69e-09!83;UBERON:0000486!4.76e-09!82;UBERON:0000475!3.48e-08!365;UBERON:0005256!5.88e-08!143;UBERON:0004923!9.66e-08!57;UBERON:0002199!1.12e-07!45;UBERON:0002416!1.12e-07!45;UBERON:0003104!2.35e-07!238;UBERON:0009142!2.35e-07!238;UBERON:0002097!3.26e-07!40;UBERON:0004290!3.31e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.84e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.21e-07,41;UBERON:0002199,1.37e-07,46;UBERON:0002416,1.37e-07,46 | |||
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| |||
|short_description=p10@STMN1 | |||
}} |
Revision as of 04:55, 12 September 2013
Short description: | p10@STMN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_STMN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000513116, uc001bky.2_5end |
EntrezGene: | STMN1 |
HGNC: | 6510 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.54e-11 | 76 |
receptor cell | 6.65e-09 | 6 |
sensory epithelial cell | 6.65e-09 | 6 |
olfactory epithelial cell | 6.65e-09 | 6 |
skin fibroblast | 3.59e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.21e-07 | 41 |
integument | 1.37e-07 | 46 |
integumental system | 1.37e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.83e-07 | 5 |
myotonic disease | 8.83e-07 | 5 |
muscle tissue disease | 8.83e-07 | 5 |
myopathy | 8.83e-07 | 5 |
muscular disease | 8.83e-07 | 5 |
myotonic dystrophy | 8.83e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.