FFCP PHASE1:Hg19::chr1:185703364..185703371,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C152|description=CAGE_peak_at_chr1:185703364..185703371,-|id=chr1:185703364..185703371,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002591;5.12e-50;1!CL:0000333;2.94e-11;5|ontology_enrichment_celltype_v019_2=CL:0002591,6.58e-50,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:171!3.85e-11!10;DOID:3095!8.78e-07!22;DOID:2994!8.78e-07!22|ontology_enrichment_disease_v019=DOID:171;4.50e-45;10!DOID:3095;4.13e-21;22!DOID:2994;4.13e-21;22!DOID:169;1.32e-09;6|ontology_enrichment_disease_v019_2=DOID:171,4.18e-45,10;DOID:3095,3.99e-21,22;DOID:2994,3.99e-21,22;DOID:169,1.32e-09,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002346;4.53e-50;4!UBERON:0000923;4.53e-50;4!UBERON:0010316;4.53e-50;4!UBERON:0005291;4.53e-50;4!UBERON:0002050;2.45e-40;5!UBERON:0005423;2.45e-40;5!UBERON:0000078;8.10e-26;2!UBERON:0002012;8.10e-26;2!UBERON:0008886;8.10e-26;2!UBERON:0000013;2.94e-11;5!UBERON:0002410;2.94e-11;5!UBERON:0000010;7.91e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0000078,9.18e-26,2;UBERON:0007497,9.18e-26,2;UBERON:0003643,9.18e-26,2;UBERON:0003504,9.18e-26,2;UBERON:0003469,9.18e-26,2;UBERON:0003496,9.18e-26,2;UBERON:0002012,9.18e-26,2;UBERON:0008886,9.18e-26,2;UBERON:0007303,9.18e-26,2;UBERON:0002061,9.18e-26,2;UBERON:0005432,9.18e-26,2;UBERON:0004363,9.18e-26,2;UBERON:0004145,1.12e-17,3;UBERON:0000013,2.94e-11,5;UBERON:0002410,2.94e-11,5;UBERON:0003498,3.60e-11,5;UBERON:0005985,3.60e-11,5;UBERON:0010188,1.57e-09,6;UBERON:0002539,1.57e-09,6;UBERON:0003351,1.57e-09,6;UBERON:0008816,1.57e-09,6;UBERON:0000010,7.91e-07,8;UBERON:0000485,8.85e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67352101155024,0,0.169732529954025,0.212574920101683,1.36329340684902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,6.68310728566558,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0|short_description=p@chr1:185703364..185703371,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_at_chr1:185703364..185703371,- | |||
|id=chr1:185703364..185703371,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;5.12e-50;1!CL:0000333;2.94e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,6.58e-50,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!3.85e-11!10;DOID:3095!8.78e-07!22;DOID:2994!8.78e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:171;4.50e-45;10!DOID:3095;4.13e-21;22!DOID:2994;4.13e-21;22!DOID:169;1.32e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.18e-45,10;DOID:3095,3.99e-21,22;DOID:2994,3.99e-21,22;DOID:169,1.32e-09,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.53e-50;4!UBERON:0000923;4.53e-50;4!UBERON:0010316;4.53e-50;4!UBERON:0005291;4.53e-50;4!UBERON:0002050;2.45e-40;5!UBERON:0005423;2.45e-40;5!UBERON:0000078;8.10e-26;2!UBERON:0002012;8.10e-26;2!UBERON:0008886;8.10e-26;2!UBERON:0000013;2.94e-11;5!UBERON:0002410;2.94e-11;5!UBERON:0000010;7.91e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,9.18e-26,2;UBERON:0007497,9.18e-26,2;UBERON:0003643,9.18e-26,2;UBERON:0003504,9.18e-26,2;UBERON:0003469,9.18e-26,2;UBERON:0003496,9.18e-26,2;UBERON:0002012,9.18e-26,2;UBERON:0008886,9.18e-26,2;UBERON:0007303,9.18e-26,2;UBERON:0002061,9.18e-26,2;UBERON:0005432,9.18e-26,2;UBERON:0004363,9.18e-26,2;UBERON:0004145,1.12e-17,3;UBERON:0000013,2.94e-11,5;UBERON:0002410,2.94e-11,5;UBERON:0003498,3.60e-11,5;UBERON:0005985,3.60e-11,5;UBERON:0010188,1.57e-09,6;UBERON:0002539,1.57e-09,6;UBERON:0003351,1.57e-09,6;UBERON:0008816,1.57e-09,6;UBERON:0000010,7.91e-07,8;UBERON:0000485,8.85e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67352101155024,0,0.169732529954025,0.212574920101683,1.36329340684902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,6.68310728566558,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:185703364..185703371,- | |||
}} |
Revision as of 02:21, 12 September 2013
Short description: | p@chr1:185703364..185703371, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:185703364..185703371, - |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 6.58e-50 | 1 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 9.18e-26 | 2 |
developing epithelial placode | 9.18e-26 | 2 |
respiratory system arterial blood vessel | 9.18e-26 | 2 |
respiratory system blood vessel | 9.18e-26 | 2 |
respiratory system artery | 9.18e-26 | 2 |
head blood vessel | 9.18e-26 | 2 |
pulmonary artery | 9.18e-26 | 2 |
pulmonary vascular system | 9.18e-26 | 2 |
pharyngeal vasculature | 9.18e-26 | 2 |
truncus arteriosus | 9.18e-26 | 2 |
aortic sac | 9.18e-26 | 2 |
pharyngeal arch artery | 9.18e-26 | 2 |
outflow tract | 1.12e-17 | 3 |
sympathetic nervous system | 2.94e-11 | 5 |
autonomic nervous system | 2.94e-11 | 5 |
heart blood vessel | 3.60e-11 | 5 |
coronary vessel | 3.60e-11 | 5 |
protuberance | 1.57e-09 | 6 |
pharyngeal arch | 1.57e-09 | 6 |
pharyngeal epithelium | 1.57e-09 | 6 |
embryonic head | 1.57e-09 | 6 |
peripheral nervous system | 7.91e-07 | 8 |
simple columnar epithelium | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.18e-45 | 10 |
germ cell and embryonal cancer | 3.99e-21 | 22 |
germ cell cancer | 3.99e-21 | 22 |
neuroendocrine tumor | 1.32e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.