FFCP PHASE1:Hg19::chr1:204042215..204042228,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9580 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11192 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENST00000367203_5end | |||
|description=CAGE_peak_2_at_SOX13_5end | |||
|id=chr1:204042215..204042228,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.60e-33!254;CL:0002321!8.94e-11!248;CL:0000220!4.03e-10!246;CL:0000076!7.71e-09!62;CL:0000223!3.25e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.00e-30,253;CL:0000076,4.02e-09,63;CL:0002321,8.19e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.34e-14!106;DOID:0050687!2.06e-11!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.51e-14,106;DOID:0050687,4.49e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0000466!8.12e-13!126;UBERON:0000468!2.77e-11!659;UBERON:0000464!3.17e-11!104;UBERON:0009569!7.66e-11!113;UBERON:0004119!3.07e-10!169;UBERON:0000925!3.07e-10!169;UBERON:0006595!3.07e-10!169;UBERON:0004921!3.97e-09!129;UBERON:0004185!3.97e-09!129;UBERON:0005177!9.56e-09!107;UBERON:0001007!2.14e-08!155;UBERON:0001555!2.14e-08!155;UBERON:0007026!2.14e-08!155;UBERON:0000077!3.00e-08!130;UBERON:0002100!4.99e-08!216;UBERON:0000475!7.10e-08!365;UBERON:0000467!8.85e-08!625;UBERON:0002553!1.11e-07!70;UBERON:0000480!1.48e-07!626;UBERON:0001041!1.71e-07!98;UBERON:0000064!3.48e-07!219;UBERON:0003886!6.94e-07!63;UBERON:0000922!7.09e-07!612;UBERON:0003104!8.94e-07!238;UBERON:0009142!8.94e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,8.70e-10,112;UBERON:0005177,5.41e-09,101;UBERON:0004119,2.35e-07,160;UBERON:0000925,2.35e-07,160;UBERON:0006595,2.35e-07,160;UBERON:0004921,3.80e-07,118 | |||
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| |||
|short_description=p2@SOX13 | |||
}} |
Revision as of 02:57, 12 September 2013
Short description: | p2@SOX13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SOX13_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000367203_5end |
EntrezGene: | SOX13 |
HGNC: | 11192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.00e-30 | 253 |
squamous epithelial cell | 4.02e-09 | 63 |
embryonic cell | 8.19e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 8.70e-10 | 112 |
trunk region element | 5.41e-09 | 101 |
endoderm-derived structure | 2.35e-07 | 160 |
endoderm | 2.35e-07 | 160 |
presumptive endoderm | 2.35e-07 | 160 |
subdivision of digestive tract | 3.80e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.51e-14 | 106 |
cell type cancer | 4.49e-11 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.