FFCP PHASE1:Hg19::chr10:54259376..54259387,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C234|description=CAGE_peak_at_chr10:54259376..54259387,+|id=chr10:54259376..54259387,+|ontology_enrichment_celltype=CL:0002251!6.40e-08!21;CL:0000076!2.93e-07!62|ontology_enrichment_celltype_v019=CL:1000415;2.72e-10;2|ontology_enrichment_celltype_v019_2=CL:1000415,3.58e-10,2|ontology_enrichment_development_v019=UBERON:0008814;1.80e-10;2!UBERON:0010056;1.80e-10;2|ontology_enrichment_disease=DOID:1749!1.96e-34!14;DOID:305!5.78e-19!106;DOID:0050687!1.84e-13!143;DOID:7!7.05e-12!39;DOID:3151!9.57e-12!1;DOID:3149!9.57e-12!1;DOID:162!3.62e-11!235;DOID:0050619!4.91e-11!1;DOID:1357!4.91e-11!1;DOID:14566!7.02e-11!239|ontology_enrichment_disease_v019=DOID:1749;4.98e-21;14!DOID:3151;1.08e-19;1!DOID:3149;1.08e-19;1!DOID:3451;1.57e-10;2!DOID:4159;1.57e-10;2!DOID:0060122;1.57e-10;2!DOID:4074;2.72e-10;2!DOID:4905;2.72e-10;2!DOID:3498;2.72e-10;2|ontology_enrichment_disease_v019_2=DOID:1749,5.67e-21,14;DOID:3151,1.08e-19,1;DOID:3149,1.08e-19,1;DOID:305,3.33e-13,106;DOID:3451,1.57e-10,2;DOID:4159,1.57e-10,2;DOID:0060122,1.57e-10,2;DOID:4074,2.27e-10,2;DOID:4905,2.27e-10,2;DOID:3498,2.27e-10,2;DOID:0050687,1.25e-09,143;DOID:162,1.45e-08,235;DOID:14566,2.27e-08,239|ontology_enrichment_uberon=UBERON:0003343!1.48e-23!4;UBERON:0004785!1.48e-23!4;UBERON:0003729!5.62e-19!5;UBERON:0002294!1.97e-13!7;UBERON:0001173!1.97e-13!7;UBERON:0004912!1.97e-13!7;UBERON:0000997!2.18e-11!1;UBERON:0005056!2.18e-11!1;UBERON:0001764!4.91e-11!1;UBERON:0001825!4.91e-11!1;UBERON:0002394!6.02e-11!4;UBERON:0003928!6.02e-11!4;UBERON:0000974!9.01e-10!10;UBERON:0000344!3.17e-08!12|ontology_enrichment_uberon_v019=UBERON:0003343;2.59e-19;4!UBERON:0004785;2.59e-19;4!UBERON:0000997;3.25e-19;1!UBERON:0005056;3.25e-19;1!UBERON:0004176;3.25e-19;1!UBERON:0000974;3.24e-13;6!UBERON:0002294;3.30e-11;7!UBERON:0001173;3.30e-11;7!UBERON:0001723;2.12e-07;3!UBERON:0001033;2.12e-07;3!UBERON:0002110;2.79e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.48e-19,4;UBERON:0004785,2.48e-19,4;UBERON:0000997,4.69e-19,1;UBERON:0005056,4.69e-19,1;UBERON:0002294,6.36e-09,9;UBERON:0001173,6.36e-09,9;UBERON:0004912,6.36e-09,9;UBERON:0000974,2.62e-08,10;UBERON:0001723,2.05e-07,3;UBERON:0001033,2.05e-07,3;UBERON:0010056,2.05e-07,3;UBERON:0002110,3.35e-07,3;UBERON:0006242,3.35e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,1.9692329214317,0,0,0,0,0,0,0,0,0,0,0.796554137998498,0,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27390116638691,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20238230377301,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01891218839339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11444506695002,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6981013166118,0.707818340086442,0,2.77261598760812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:54259376..54259387,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C234 | |||
|description=CAGE_peak_at_chr10:54259376..54259387,+ | |||
|id=chr10:54259376..54259387,+ | |||
|ontology_enrichment_celltype=CL:0002251!6.40e-08!21;CL:0000076!2.93e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:1000415;2.72e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,3.58e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.80e-10;2!UBERON:0010056;1.80e-10;2 | |||
|ontology_enrichment_disease=DOID:1749!1.96e-34!14;DOID:305!5.78e-19!106;DOID:0050687!1.84e-13!143;DOID:7!7.05e-12!39;DOID:3151!9.57e-12!1;DOID:3149!9.57e-12!1;DOID:162!3.62e-11!235;DOID:0050619!4.91e-11!1;DOID:1357!4.91e-11!1;DOID:14566!7.02e-11!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.98e-21;14!DOID:3151;1.08e-19;1!DOID:3149;1.08e-19;1!DOID:3451;1.57e-10;2!DOID:4159;1.57e-10;2!DOID:0060122;1.57e-10;2!DOID:4074;2.72e-10;2!DOID:4905;2.72e-10;2!DOID:3498;2.72e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.67e-21,14;DOID:3151,1.08e-19,1;DOID:3149,1.08e-19,1;DOID:305,3.33e-13,106;DOID:3451,1.57e-10,2;DOID:4159,1.57e-10,2;DOID:0060122,1.57e-10,2;DOID:4074,2.27e-10,2;DOID:4905,2.27e-10,2;DOID:3498,2.27e-10,2;DOID:0050687,1.25e-09,143;DOID:162,1.45e-08,235;DOID:14566,2.27e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0003343!1.48e-23!4;UBERON:0004785!1.48e-23!4;UBERON:0003729!5.62e-19!5;UBERON:0002294!1.97e-13!7;UBERON:0001173!1.97e-13!7;UBERON:0004912!1.97e-13!7;UBERON:0000997!2.18e-11!1;UBERON:0005056!2.18e-11!1;UBERON:0001764!4.91e-11!1;UBERON:0001825!4.91e-11!1;UBERON:0002394!6.02e-11!4;UBERON:0003928!6.02e-11!4;UBERON:0000974!9.01e-10!10;UBERON:0000344!3.17e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.59e-19;4!UBERON:0004785;2.59e-19;4!UBERON:0000997;3.25e-19;1!UBERON:0005056;3.25e-19;1!UBERON:0004176;3.25e-19;1!UBERON:0000974;3.24e-13;6!UBERON:0002294;3.30e-11;7!UBERON:0001173;3.30e-11;7!UBERON:0001723;2.12e-07;3!UBERON:0001033;2.12e-07;3!UBERON:0002110;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.48e-19,4;UBERON:0004785,2.48e-19,4;UBERON:0000997,4.69e-19,1;UBERON:0005056,4.69e-19,1;UBERON:0002294,6.36e-09,9;UBERON:0001173,6.36e-09,9;UBERON:0004912,6.36e-09,9;UBERON:0000974,2.62e-08,10;UBERON:0001723,2.05e-07,3;UBERON:0001033,2.05e-07,3;UBERON:0010056,2.05e-07,3;UBERON:0002110,3.35e-07,3;UBERON:0006242,3.35e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,1.9692329214317,0,0,0,0,0,0,0,0,0,0,0.796554137998498,0,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27390116638691,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20238230377301,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01891218839339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11444506695002,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6981013166118,0.707818340086442,0,2.77261598760812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:54259376..54259387,+ | |||
}} |
Revision as of 13:39, 10 September 2013
Short description: | p@chr10:54259376..54259387, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:54259376..54259387, + |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 3.58e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 2.48e-19 | 4 |
respiratory system mucosa | 2.48e-19 | 4 |
mammalian vulva | 4.69e-19 | 1 |
external female genitalia | 4.69e-19 | 1 |
biliary system | 6.36e-09 | 9 |
biliary tree | 6.36e-09 | 9 |
biliary bud | 6.36e-09 | 9 |
neck | 2.62e-08 | 10 |
tongue | 2.05e-07 | 3 |
gustatory system | 2.05e-07 | 3 |
future tongue | 2.05e-07 | 3 |
gallbladder | 3.35e-07 | 3 |
gall bladder primordium | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.67e-21 | 14 |
skin squamous cell carcinoma | 1.08e-19 | 1 |
keratoacanthoma | 1.08e-19 | 1 |
carcinoma | 3.33e-13 | 106 |
skin carcinoma | 1.57e-10 | 2 |
skin cancer | 1.57e-10 | 2 |
integumentary system cancer | 1.57e-10 | 2 |
pancreas adenocarcinoma | 2.27e-10 | 2 |
pancreatic carcinoma | 2.27e-10 | 2 |
pancreatic ductal adenocarcinoma | 2.27e-10 | 2 |
cell type cancer | 1.25e-09 | 143 |
cancer | 1.45e-08 | 235 |
disease of cellular proliferation | 2.27e-08 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.