FFCP PHASE1:Hg19::chr11:12398076..12398108,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C58|description=CAGE_peak_at_chr11:12398076..12398108,+|id=chr11:12398076..12398108,+|ontology_enrichment_celltype=CL:0000136!2.42e-16!15;CL:0000325!2.80e-14!39;CL:0002334!8.95e-11!12;CL:0000055!4.53e-10!180;CL:0000057!6.40e-08!75;CL:0000148!5.03e-07!10;CL:0000541!5.03e-07!10;CL:0000147!7.73e-07!14|ontology_enrichment_celltype_v019=CL:0000136;5.04e-29;13!CL:0000148;4.01e-17;10!CL:0000147;6.91e-12;14!CL:0002567;1.10e-11;3!CL:0002521;2.14e-10;3!CL:0002570;3.97e-10;8!CL:0000569;3.15e-08;4!CL:0002617;3.48e-08;2!CL:0000710;5.76e-08;20!CL:0000048;8.90e-08;58!CL:0000723;9.30e-08;61!CL:0000134;2.70e-07;55|ontology_enrichment_celltype_v019_2=CL:0000136,2.11e-34,15;CL:0000148,4.04e-17,10;CL:0000541,4.04e-17,10;CL:0000147,6.94e-12,14;CL:0002567,1.11e-11,3;CL:0002521,3.12e-10,3;CL:0002570,3.31e-10,8;CL:0000569,2.35e-08,4;CL:0000011,2.35e-08,4;CL:0002617,3.67e-08,2;CL:0000710,5.78e-08,20;CL:0000219,1.09e-07,386|ontology_enrichment_development_v019=CL:0000011;3.15e-08;4|ontology_enrichment_disease_v019=DOID:2394;2.81e-10;14|ontology_enrichment_disease_v019_2=DOID:2394,3.80e-10,14|ontology_enrichment_uberon=UBERON:0001013!1.64e-12!14;UBERON:0004457!6.91e-07!12;UBERON:0000042!6.91e-07!12|ontology_enrichment_uberon_v019=UBERON:0001013;1.35e-21;14!UBERON:0002190;2.14e-10;3!UBERON:0003688;3.26e-09;6!UBERON:0002358;3.26e-09;6!UBERON:0003684;3.26e-09;6!UBERON:0001178;3.26e-09;6!UBERON:0004457;5.28e-09;9!UBERON:0000042;5.28e-09;9!UBERON:0000310;2.53e-08;10!UBERON:0002119;9.10e-08;4!UBERON:0001443;1.57e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.22e-21,14;UBERON:0002190,3.12e-10,3;UBERON:0003688,4.09e-09,6;UBERON:0002358,4.09e-09,6;UBERON:0003684,4.09e-09,6;UBERON:0001178,4.09e-09,6;UBERON:0000310,2.07e-08,10;UBERON:0003134,5.37e-08,37;UBERON:0000474,5.37e-08,37;UBERON:0001443,1.31e-07,11;UBERON:0002119,1.39e-07,4;UBERON:0003100,5.21e-07,41;UBERON:0004458,8.07e-07,49|phase1_expression=4.1786027232228,7.27941781229343,4.93340414335899,0,2.68176656656373,0.872338524100369,2.53299878168311,1.26343974685366,2.08948502559871,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,1.58891016975863,0.573673241497627,0,1.12135520028461,0,0,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.751190294532984,0,0.358779271377724,1.2813443329114,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0,0.504867548488229,0.368199594569197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,58.4815606430877,30.1770856191039,38.6817575793155,18.8179690624976,11.4138516900689,23.1264154539816,50.3054521429818,0,0,0.07333828582095,0.646358578788889,0,2.535908257668,0.531876233169741,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0.710783897485092,0,0.904318131178758,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,3.47350930946288,1.68808170616869,0.841980283299221,4.86928767171664,1.02341449813341,0.160853921143607,2.96836132889982,0.462629081407967,0.355123450626254,0.492762936082855,0,0.464841513839837,0,0,0,0.803701137152247,0,2.36023946926963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.412164046590889,0,0,0.574265537996172,0,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0,0,0,0.356128142586949,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.539617372749944,1.37268514868027,0.471249609382746,0.202182481573316,0,0.421258456238981,0.48763373908959,0,1.05650146756755,0.136499911407986,1.41405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,1.06428319221179,0.422215270595328,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,1.67693789582787,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,1.92375646259493,0,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_at_chr11:12398076..12398108,+ | |||
|id=chr11:12398076..12398108,+ | |||
|ontology_enrichment_celltype=CL:0000136!2.42e-16!15;CL:0000325!2.80e-14!39;CL:0002334!8.95e-11!12;CL:0000055!4.53e-10!180;CL:0000057!6.40e-08!75;CL:0000148!5.03e-07!10;CL:0000541!5.03e-07!10;CL:0000147!7.73e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.04e-29;13!CL:0000148;4.01e-17;10!CL:0000147;6.91e-12;14!CL:0002567;1.10e-11;3!CL:0002521;2.14e-10;3!CL:0002570;3.97e-10;8!CL:0000569;3.15e-08;4!CL:0002617;3.48e-08;2!CL:0000710;5.76e-08;20!CL:0000048;8.90e-08;58!CL:0000723;9.30e-08;61!CL:0000134;2.70e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.11e-34,15;CL:0000148,4.04e-17,10;CL:0000541,4.04e-17,10;CL:0000147,6.94e-12,14;CL:0002567,1.11e-11,3;CL:0002521,3.12e-10,3;CL:0002570,3.31e-10,8;CL:0000569,2.35e-08,4;CL:0000011,2.35e-08,4;CL:0002617,3.67e-08,2;CL:0000710,5.78e-08,20;CL:0000219,1.09e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000011;3.15e-08;4 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.81e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.80e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001013!1.64e-12!14;UBERON:0004457!6.91e-07!12;UBERON:0000042!6.91e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.35e-21;14!UBERON:0002190;2.14e-10;3!UBERON:0003688;3.26e-09;6!UBERON:0002358;3.26e-09;6!UBERON:0003684;3.26e-09;6!UBERON:0001178;3.26e-09;6!UBERON:0004457;5.28e-09;9!UBERON:0000042;5.28e-09;9!UBERON:0000310;2.53e-08;10!UBERON:0002119;9.10e-08;4!UBERON:0001443;1.57e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.22e-21,14;UBERON:0002190,3.12e-10,3;UBERON:0003688,4.09e-09,6;UBERON:0002358,4.09e-09,6;UBERON:0003684,4.09e-09,6;UBERON:0001178,4.09e-09,6;UBERON:0000310,2.07e-08,10;UBERON:0003134,5.37e-08,37;UBERON:0000474,5.37e-08,37;UBERON:0001443,1.31e-07,11;UBERON:0002119,1.39e-07,4;UBERON:0003100,5.21e-07,41;UBERON:0004458,8.07e-07,49 | |||
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|short_description=p@chr11:12398076..12398108,+ | |||
}} |
Revision as of 16:23, 10 September 2013
Short description: | p@chr11:12398076..12398108, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:12398076..12398108, + |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.11e-34 | 15 |
melanocyte | 4.04e-17 | 10 |
melanoblast | 4.04e-17 | 10 |
pigment cell | 6.94e-12 | 14 |
light melanocyte | 1.11e-11 | 3 |
subcutaneous fat cell | 3.12e-10 | 3 |
mesenchymal stem cell of adipose | 3.31e-10 | 8 |
cardiac mesenchymal cell | 2.35e-08 | 4 |
migratory trunk neural crest cell | 2.35e-08 | 4 |
adipocyte of breast | 3.67e-08 | 2 |
neurecto-epithelial cell | 5.78e-08 | 20 |
motile cell | 1.09e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.22e-21 | 14 |
subcutaneous adipose tissue | 3.12e-10 | 3 |
omentum | 4.09e-09 | 6 |
peritoneum | 4.09e-09 | 6 |
abdominal cavity | 4.09e-09 | 6 |
visceral peritoneum | 4.09e-09 | 6 |
breast | 2.07e-08 | 10 |
female reproductive organ | 5.37e-08 | 37 |
female reproductive system | 5.37e-08 | 37 |
chest | 1.31e-07 | 11 |
left ovary | 1.39e-07 | 4 |
female organism | 5.21e-07 | 41 |
body cavity or lining | 8.07e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.80e-10 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.