FFCP PHASE1:Hg19::chr11:108464281..108464304,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23086|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30578|TSSclassifier=S|UniProt=Q8NEV8,Q149M6|association_with_transcript=69bp_to_ENST00000265843,NM_015065,uc001pkk.2_5end|description=CAGE_peak_5_at_EXPH5_5end|id=chr11:108464281..108464304,-|ontology_enrichment_celltype=CL:0000066!1.18e-17!254;CL:0002076!2.70e-08!43;CL:0002159!4.77e-08!13;CL:0000039!3.81e-07!7;CL:0000586!3.81e-07!7|ontology_enrichment_celltype_v019=CL:0002166;8.04e-07;3!CL:0002621;8.04e-07;3|ontology_enrichment_celltype_v019_2=CL:0000066,2.72e-07,253;CL:0002166,7.17e-07,3;CL:0002621,9.33e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!1.32e-24!106;DOID:0050687!1.26e-17!143;DOID:162!4.48e-11!235;DOID:1749!7.82e-11!14;DOID:14566!2.62e-10!239|ontology_enrichment_disease_v019=DOID:1749;1.37e-07;14|ontology_enrichment_disease_v019_2=DOID:305,1.74e-13,106;DOID:0050687,7.10e-10,143;DOID:1749,1.71e-07,14|ontology_enrichment_uberon=UBERON:0004119!7.80e-09!169;UBERON:0000925!7.80e-09!169;UBERON:0006595!7.80e-09!169;UBERON:0000344!2.91e-08!12;UBERON:0005153!1.13e-07!37;UBERON:0001004!1.86e-07!72;UBERON:0005157!1.96e-07!51;UBERON:0005631!3.55e-07!14;UBERON:0000158!3.55e-07!14;UBERON:0001007!7.17e-07!155;UBERON:0001555!7.17e-07!155;UBERON:0007026!7.17e-07!155|ontology_enrichment_uberon_v019=UBERON:0002394;2.48e-11;4!UBERON:0003928;2.48e-11;4!UBERON:0002294;8.64e-11;7!UBERON:0001173;8.64e-11;7!UBERON:0000058;1.08e-07;10!UBERON:0001949;8.04e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002294,1.99e-08,9;UBERON:0001173,1.99e-08,9;UBERON:0004912,1.99e-08,9;UBERON:0002394,1.06e-07,6;UBERON:0003928,1.06e-07,6;UBERON:0001949,9.33e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.382067028739756,0.821005894499457,1.25937250101887,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,0.393010762749165,0.616804496998528,0,0.977766799900771,0.946895611469467,0,0,0,0.221533894583621,0,0,0,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.351339142772504,0.196468613246569,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.57978255948989,1.09098448236334,2.86804595389004,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0.614942192715568,0,2.63400684980701,0,0.804231779293047,0.740707561268237,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,1.51183915378974,2.55195175036296,0.447792613514241,0.290633938513962,0.383382679165211,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,1.00253235151642,0.552485933615378,0,0,0,0,0.0770153371044148,0,0,0.422206515571503,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,2.16386124460217,0,0.082509499920588,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.330569830721956,0.384380134730212,0.765676274967505,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0,0,3.01260162485693,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0.320472213382419,0,0.980160863924127,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0.284136146806413,5.96861211844225,0.890894042497916,1.53580351049616,0,0,0.222617410045812,0,0.211125408127993,0.19924798825107,0.276283915531148,0.251932747854276,0.20453736500431,0,0,3.41499734359842,3.75944466818779,0,0,0,0,0,0,0,0.260427761085233,2.27395999990109,0,1.365521379426,2.79679015322043,0.472775363535873,0.344743373241465,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0.21787692703798,2.23077990845765,0.230850775511391,0,0.922255617552241,0.897576444097721,3.25942115766024,1.5950057986596,0.641183153813036,0.533034776018635,1.02193298195737,0,0.166211681900156,0,0.19606253431774,0.167821586975843,0.189753732724185,0,0.421996129056054,1.63232808159148,0.424059214301822,0.216388639742091,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0.586993856796269,0.242780379534093,0,0,0,0.063186579628488,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23086 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30578 | |||
|TSSclassifier=S | |||
|UniProt=Q8NEV8,Q149M6 | |||
|association_with_transcript=69bp_to_ENST00000265843,NM_015065,uc001pkk.2_5end | |||
|description=CAGE_peak_5_at_EXPH5_5end | |||
|id=chr11:108464281..108464304,- | |||
|ontology_enrichment_celltype=CL:0000066!1.18e-17!254;CL:0002076!2.70e-08!43;CL:0002159!4.77e-08!13;CL:0000039!3.81e-07!7;CL:0000586!3.81e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002166;8.04e-07;3!CL:0002621;8.04e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.72e-07,253;CL:0002166,7.17e-07,3;CL:0002621,9.33e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.32e-24!106;DOID:0050687!1.26e-17!143;DOID:162!4.48e-11!235;DOID:1749!7.82e-11!14;DOID:14566!2.62e-10!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.37e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.74e-13,106;DOID:0050687,7.10e-10,143;DOID:1749,1.71e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.80e-09!169;UBERON:0000925!7.80e-09!169;UBERON:0006595!7.80e-09!169;UBERON:0000344!2.91e-08!12;UBERON:0005153!1.13e-07!37;UBERON:0001004!1.86e-07!72;UBERON:0005157!1.96e-07!51;UBERON:0005631!3.55e-07!14;UBERON:0000158!3.55e-07!14;UBERON:0001007!7.17e-07!155;UBERON:0001555!7.17e-07!155;UBERON:0007026!7.17e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;2.48e-11;4!UBERON:0003928;2.48e-11;4!UBERON:0002294;8.64e-11;7!UBERON:0001173;8.64e-11;7!UBERON:0000058;1.08e-07;10!UBERON:0001949;8.04e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,1.99e-08,9;UBERON:0001173,1.99e-08,9;UBERON:0004912,1.99e-08,9;UBERON:0002394,1.06e-07,6;UBERON:0003928,1.06e-07,6;UBERON:0001949,9.33e-07,3 | |||
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| |||
|short_description=p5@EXPH5 | |||
}} |
Revision as of 15:34, 10 September 2013
Short description: | p5@EXPH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_EXPH5_5end |
Coexpression cluster: | NA |
Association with transcript: | 69bp_to_ENST00000265843, NM_015065, uc001pkk.2_5end |
EntrezGene: | EXPH5 |
HGNC: | 30578 |
UniProt: | Q8NEV8Q149M6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.72e-07 | 253 |
epithelial cell of Malassez | 7.17e-07 | 3 |
gingival epithelial cell | 9.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
biliary system | 1.99e-08 | 9 |
biliary tree | 1.99e-08 | 9 |
biliary bud | 1.99e-08 | 9 |
bile duct | 1.06e-07 | 6 |
digestive system duct | 1.06e-07 | 6 |
gingival epithelium | 9.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.74e-13 | 106 |
cell type cancer | 7.10e-10 | 143 |
squamous cell carcinoma | 1.71e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.