FFCP PHASE1:Hg19::chr11:114466477..114466489,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54827|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23117|TSSclassifier=S|UniProt=Q6UWF7|association_with_transcript=0bp_to_ENST00000375478,NM_001077639,NM_017678,uc001ppc.2,uc001ppd.2_5end|coexpression_cluster_id=C37|description=CAGE_peak_1_at_FAM55D_5end|id=chr11:114466477..114466489,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008801;9.99e-30;1!UBERON:0006298;1.33e-29;1!UBERON:0001045;4.20e-29;1|ontology_enrichment_disease=DOID:3151!4.54e-09!1;DOID:3149!4.54e-09!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000059!7.25e-18!11;UBERON:0001829!3.30e-17!2;UBERON:0007023!2.52e-16!115;UBERON:0001155!1.93e-14!9;UBERON:0001044!9.10e-13!6;UBERON:0003293!9.10e-13!6;UBERON:0003294!9.10e-13!6;UBERON:0010047!9.10e-13!6;UBERON:0000167!9.10e-13!6;UBERON:0000078!5.91e-11!18;UBERON:0004921!9.87e-11!129;UBERON:0004185!9.87e-11!129;UBERON:0000161!3.36e-10!35;UBERON:0001831!1.74e-09!1;UBERON:0001567!1.74e-09!1;UBERON:0008801!1.74e-09!1;UBERON:0001736!1.89e-09!1;UBERON:0006298!1.89e-09!1;UBERON:0000166!2.33e-09!21;UBERON:0001154!2.60e-09!1;UBERON:0001153!2.60e-09!1;UBERON:0002171!3.58e-09!1;UBERON:0006518!3.58e-09!1;UBERON:0008949!3.58e-09!1;UBERON:0000101!3.58e-09!1;UBERON:0002167!3.58e-09!1;UBERON:0002372!4.19e-09!1;UBERON:0001961!4.19e-09!1;UBERON:0001744!4.19e-09!1;UBERON:0001735!4.19e-09!1;UBERON:0006834!7.85e-09!1;UBERON:0001007!1.76e-08!155;UBERON:0001555!1.76e-08!155;UBERON:0007026!1.76e-08!155;UBERON:0003408!7.57e-08!10;UBERON:0004119!1.48e-07!169;UBERON:0000925!1.48e-07!169;UBERON:0006595!1.48e-07!169;UBERON:0005409!2.46e-07!35;UBERON:0004907!3.80e-07!5;UBERON:0000165!5.82e-07!28;UBERON:0000930!5.82e-07!28;UBERON:0000160!6.71e-07!27|ontology_enrichment_uberon_v019=UBERON:0001829;2.02e-57;2!UBERON:0001155;4.70e-50;9!UBERON:0001044;3.16e-43;6!UBERON:0003293;3.16e-43;6!UBERON:0003294;3.16e-43;6!UBERON:0010047;3.16e-43;6!UBERON:0003408;3.16e-43;6!UBERON:0000167;3.16e-43;6!UBERON:0000059;4.22e-41;11!UBERON:0004921;7.95e-38;33!UBERON:0001831;9.99e-30;1!UBERON:0001567;9.99e-30;1!UBERON:0001736;1.33e-29;1!UBERON:0001154;4.20e-29;1!UBERON:0001153;4.20e-29;1!UBERON:0009854;4.20e-29;1!UBERON:0000160;2.10e-25;17!UBERON:0005409;5.04e-20;22!UBERON:0001041;4.77e-19;14!UBERON:0001555;1.24e-15;54!UBERON:0004089;1.33e-15;2!UBERON:0000161;3.02e-14;19!UBERON:0000166;3.02e-14;19!UBERON:0001007;1.41e-11;81!UBERON:0000165;6.71e-10;28!UBERON:0002365;7.90e-09;31!UBERON:0002330;7.90e-09;31!UBERON:0009856;2.61e-08;4!UBERON:0004907;6.77e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.02e-57,2;UBERON:0001155,4.70e-50,9;UBERON:0001044,3.16e-43,6;UBERON:0003293,3.16e-43,6;UBERON:0003294,3.16e-43,6;UBERON:0010047,3.16e-43,6;UBERON:0000167,3.16e-43,6;UBERON:0000059,4.22e-41,11;UBERON:0001831,9.99e-30,1;UBERON:0001567,9.99e-30,1;UBERON:0008801,9.99e-30,1;UBERON:0001736,1.33e-29,1;UBERON:0006298,1.33e-29,1;UBERON:0001154,4.20e-29,1;UBERON:0001153,4.20e-29,1;UBERON:0001045,4.20e-29,1;UBERON:0003408,2.55e-26,10;UBERON:0000160,2.10e-25,17;UBERON:0005409,8.75e-18,25;UBERON:0004089,1.33e-15,2;UBERON:0000166,2.09e-12,22;UBERON:0004921,7.31e-12,118;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0000165,1.39e-09,29;UBERON:0000930,1.39e-09,29;UBERON:0007023,3.60e-09,114;UBERON:0002365,5.24e-09,31;UBERON:0002330,5.24e-09,31;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0000161,7.59e-08,36;UBERON:0004907,6.77e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4327761989016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8673340701981,18.2222582876879,28.7184168118804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54827 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23117 | |||
|TSSclassifier=S | |||
|UniProt=Q6UWF7 | |||
|association_with_transcript=0bp_to_ENST00000375478,NM_001077639,NM_017678,uc001ppc.2,uc001ppd.2_5end | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_1_at_FAM55D_5end | |||
|id=chr11:114466477..114466489,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;9.99e-30;1!UBERON:0006298;1.33e-29;1!UBERON:0001045;4.20e-29;1 | |||
|ontology_enrichment_disease=DOID:3151!4.54e-09!1;DOID:3149!4.54e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!7.25e-18!11;UBERON:0001829!3.30e-17!2;UBERON:0007023!2.52e-16!115;UBERON:0001155!1.93e-14!9;UBERON:0001044!9.10e-13!6;UBERON:0003293!9.10e-13!6;UBERON:0003294!9.10e-13!6;UBERON:0010047!9.10e-13!6;UBERON:0000167!9.10e-13!6;UBERON:0000078!5.91e-11!18;UBERON:0004921!9.87e-11!129;UBERON:0004185!9.87e-11!129;UBERON:0000161!3.36e-10!35;UBERON:0001831!1.74e-09!1;UBERON:0001567!1.74e-09!1;UBERON:0008801!1.74e-09!1;UBERON:0001736!1.89e-09!1;UBERON:0006298!1.89e-09!1;UBERON:0000166!2.33e-09!21;UBERON:0001154!2.60e-09!1;UBERON:0001153!2.60e-09!1;UBERON:0002171!3.58e-09!1;UBERON:0006518!3.58e-09!1;UBERON:0008949!3.58e-09!1;UBERON:0000101!3.58e-09!1;UBERON:0002167!3.58e-09!1;UBERON:0002372!4.19e-09!1;UBERON:0001961!4.19e-09!1;UBERON:0001744!4.19e-09!1;UBERON:0001735!4.19e-09!1;UBERON:0006834!7.85e-09!1;UBERON:0001007!1.76e-08!155;UBERON:0001555!1.76e-08!155;UBERON:0007026!1.76e-08!155;UBERON:0003408!7.57e-08!10;UBERON:0004119!1.48e-07!169;UBERON:0000925!1.48e-07!169;UBERON:0006595!1.48e-07!169;UBERON:0005409!2.46e-07!35;UBERON:0004907!3.80e-07!5;UBERON:0000165!5.82e-07!28;UBERON:0000930!5.82e-07!28;UBERON:0000160!6.71e-07!27 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.02e-57,2;UBERON:0001155,4.70e-50,9;UBERON:0001044,3.16e-43,6;UBERON:0003293,3.16e-43,6;UBERON:0003294,3.16e-43,6;UBERON:0010047,3.16e-43,6;UBERON:0000167,3.16e-43,6;UBERON:0000059,4.22e-41,11;UBERON:0001831,9.99e-30,1;UBERON:0001567,9.99e-30,1;UBERON:0008801,9.99e-30,1;UBERON:0001736,1.33e-29,1;UBERON:0006298,1.33e-29,1;UBERON:0001154,4.20e-29,1;UBERON:0001153,4.20e-29,1;UBERON:0001045,4.20e-29,1;UBERON:0003408,2.55e-26,10;UBERON:0000160,2.10e-25,17;UBERON:0005409,8.75e-18,25;UBERON:0004089,1.33e-15,2;UBERON:0000166,2.09e-12,22;UBERON:0004921,7.31e-12,118;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0000165,1.39e-09,29;UBERON:0000930,1.39e-09,29;UBERON:0007023,3.60e-09,114;UBERON:0002365,5.24e-09,31;UBERON:0002330,5.24e-09,31;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0000161,7.59e-08,36;UBERON:0004907,6.77e-07,5 | |||
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|short_description=p1@FAM55D | |||
}} |
Revision as of 15:50, 10 September 2013
Short description: | p1@FAM55D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FAM55D_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_ENST00000375478, NM_001077639, NM_017678, uc001ppc.2, uc001ppd.2_5end |
EntrezGene: | FAM55D |
HGNC: | 23117 |
UniProt: | Q6UWF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.02e-57 | 2 |
colon | 4.70e-50 | 9 |
saliva-secreting gland | 3.16e-43 | 6 |
gland of oral region | 3.16e-43 | 6 |
gland of foregut | 3.16e-43 | 6 |
oral gland | 3.16e-43 | 6 |
oral cavity | 3.16e-43 | 6 |
large intestine | 4.22e-41 | 11 |
parotid gland | 9.99e-30 | 1 |
cheek | 9.99e-30 | 1 |
parotid gland primordium | 9.99e-30 | 1 |
submandibular gland | 1.33e-29 | 1 |
submandibular gland primordium | 1.33e-29 | 1 |
vermiform appendix | 4.20e-29 | 1 |
caecum | 4.20e-29 | 1 |
midgut | 4.20e-29 | 1 |
gland of gut | 2.55e-26 | 10 |
intestine | 2.10e-25 | 17 |
gastrointestinal system | 8.75e-18 | 25 |
midface | 1.33e-15 | 2 |
oral opening | 2.09e-12 | 22 |
subdivision of digestive tract | 7.31e-12 | 118 |
digestive system | 1.06e-09 | 145 |
digestive tract | 1.06e-09 | 145 |
primitive gut | 1.06e-09 | 145 |
mouth | 1.39e-09 | 29 |
stomodeum | 1.39e-09 | 29 |
adult organism | 3.60e-09 | 114 |
exocrine gland | 5.24e-09 | 31 |
exocrine system | 5.24e-09 | 31 |
endoderm-derived structure | 8.31e-09 | 160 |
endoderm | 8.31e-09 | 160 |
presumptive endoderm | 8.31e-09 | 160 |
orifice | 7.59e-08 | 36 |
lower digestive tract | 6.77e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.