FFCP PHASE1:Hg19::chr14:21489152..21489169,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57447|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14460|TSSclassifier=S|UniProt=|association_with_transcript=30bp_to_ENST00000553567_5end|coexpression_cluster_id=C37|description=CAGE_peak_38_at_NDRG2_5end|id=chr14:21489152..21489169,-|ontology_enrichment_celltype=CL:0002274!2.41e-11!5;CL:0000457!2.41e-11!5;CL:0002191!2.41e-11!5;CL:0000097!2.41e-11!5;CL:0000831!2.41e-11!5;CL:0002028!2.41e-11!5|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008801;9.99e-30;1!UBERON:0006298;1.33e-29;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001829!4.13e-28!2;UBERON:0003127!7.10e-28!2;UBERON:0000078!1.74e-26!18;UBERON:0000166!1.12e-22!21;UBERON:0001044!4.86e-21!6;UBERON:0003293!4.86e-21!6;UBERON:0003294!4.86e-21!6;UBERON:0010047!4.86e-21!6;UBERON:0000167!4.86e-21!6;UBERON:0001723!1.04e-18!3;UBERON:0001033!1.04e-18!3;UBERON:0010056!1.04e-18!3;UBERON:0000165!5.90e-17!28;UBERON:0000930!5.90e-17!28;UBERON:0001831!5.42e-15!1;UBERON:0001567!5.42e-15!1;UBERON:0008801!5.42e-15!1;UBERON:0001736!6.22e-15!1;UBERON:0006298!6.22e-15!1;UBERON:0002372!2.11e-14!1;UBERON:0001961!2.11e-14!1;UBERON:0001744!2.11e-14!1;UBERON:0001735!2.11e-14!1;UBERON:0000161!1.64e-13!35;UBERON:0003408!7.01e-13!10;UBERON:0001042!1.62e-12!10;UBERON:0009145!1.62e-12!10;UBERON:0006562!1.96e-11!11;UBERON:0001004!3.55e-11!72;UBERON:0001444!9.05e-10!48;UBERON:0003126!1.17e-08!7;UBERON:0001005!1.17e-08!7;UBERON:0004089!3.82e-08!2;UBERON:0000341!5.02e-08!2;UBERON:0001041!5.37e-08!98;UBERON:0000072!3.32e-07!46;UBERON:0001557!7.64e-07!19|ontology_enrichment_uberon_v019=UBERON:0001829;2.01e-57;2!UBERON:0003127;1.13e-56;2!UBERON:0001044;3.16e-43;6!UBERON:0003293;3.16e-43;6!UBERON:0003294;3.16e-43;6!UBERON:0010047;3.16e-43;6!UBERON:0003408;3.16e-43;6!UBERON:0000167;3.16e-43;6!UBERON:0001831;9.99e-30;1!UBERON:0001567;9.99e-30;1!UBERON:0001736;1.33e-29;1!UBERON:0001041;4.77e-19;14!UBERON:0003126;4.73e-17;7!UBERON:0001005;4.73e-17;7!UBERON:0000165;9.64e-17;28!UBERON:0004089;1.33e-15;2!UBERON:0000341;2.21e-15;2!UBERON:0000161;3.02e-14;19!UBERON:0000166;3.02e-14;19!UBERON:0001723;1.04e-10;3!UBERON:0001033;1.04e-10;3!UBERON:0000153;5.57e-10;54!UBERON:0007811;1.03e-09;52!UBERON:0002365;7.90e-09;31!UBERON:0002330;7.90e-09;31!UBERON:0007196;1.71e-08;15!UBERON:0001558;1.71e-08;15!UBERON:0004921;1.83e-07;33!UBERON:0000033;4.55e-07;50!UBERON:0001004;5.07e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.02e-57,2;UBERON:0003127,6.36e-57,2;UBERON:0001044,3.16e-43,6;UBERON:0003293,3.16e-43,6;UBERON:0003294,3.16e-43,6;UBERON:0010047,3.16e-43,6;UBERON:0000167,3.16e-43,6;UBERON:0001831,9.99e-30,1;UBERON:0001567,9.99e-30,1;UBERON:0008801,9.99e-30,1;UBERON:0001736,1.33e-29,1;UBERON:0006298,1.33e-29,1;UBERON:0003408,2.55e-26,10;UBERON:0000166,4.16e-21,22;UBERON:0003126,4.02e-17,7;UBERON:0001005,4.02e-17,7;UBERON:0000165,3.69e-16,29;UBERON:0000930,3.69e-16,29;UBERON:0004089,1.33e-15,2;UBERON:0000341,2.37e-15,2;UBERON:0001004,4.96e-14,74;UBERON:0000161,4.00e-13,36;UBERON:0001041,5.68e-12,87;UBERON:0000153,9.12e-12,62;UBERON:0007811,9.12e-12,62;UBERON:0001723,1.20e-10,3;UBERON:0001033,1.20e-10,3;UBERON:0010056,1.20e-10,3;UBERON:0001444,8.97e-10,49;UBERON:0002365,5.24e-09,31;UBERON:0002330,5.24e-09,31;UBERON:0004921,8.36e-09,118;UBERON:0000033,1.31e-08,56;UBERON:0007196,1.59e-08,15;UBERON:0001558,1.59e-08,15;UBERON:0001007,3.37e-07,145;UBERON:0001555,3.37e-07,145;UBERON:0007026,3.37e-07,145|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.7024349440022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.8484160644425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.5237570042724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49263787330687,0,0,0,0,0,0,0.870866991587845,1.02669990325584,0.202056159043763,1.57788851863888,1.99596213927608,0,0,0,0,0,0,0,0,0,0|short_description=p38@NDRG2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=57447 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14460 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=30bp_to_ENST00000553567_5end | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_38_at_NDRG2_5end | |||
|id=chr14:21489152..21489169,- | |||
|ontology_enrichment_celltype=CL:0002274!2.41e-11!5;CL:0000457!2.41e-11!5;CL:0002191!2.41e-11!5;CL:0000097!2.41e-11!5;CL:0000831!2.41e-11!5;CL:0002028!2.41e-11!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;9.99e-30;1!UBERON:0006298;1.33e-29;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!4.13e-28!2;UBERON:0003127!7.10e-28!2;UBERON:0000078!1.74e-26!18;UBERON:0000166!1.12e-22!21;UBERON:0001044!4.86e-21!6;UBERON:0003293!4.86e-21!6;UBERON:0003294!4.86e-21!6;UBERON:0010047!4.86e-21!6;UBERON:0000167!4.86e-21!6;UBERON:0001723!1.04e-18!3;UBERON:0001033!1.04e-18!3;UBERON:0010056!1.04e-18!3;UBERON:0000165!5.90e-17!28;UBERON:0000930!5.90e-17!28;UBERON:0001831!5.42e-15!1;UBERON:0001567!5.42e-15!1;UBERON:0008801!5.42e-15!1;UBERON:0001736!6.22e-15!1;UBERON:0006298!6.22e-15!1;UBERON:0002372!2.11e-14!1;UBERON:0001961!2.11e-14!1;UBERON:0001744!2.11e-14!1;UBERON:0001735!2.11e-14!1;UBERON:0000161!1.64e-13!35;UBERON:0003408!7.01e-13!10;UBERON:0001042!1.62e-12!10;UBERON:0009145!1.62e-12!10;UBERON:0006562!1.96e-11!11;UBERON:0001004!3.55e-11!72;UBERON:0001444!9.05e-10!48;UBERON:0003126!1.17e-08!7;UBERON:0001005!1.17e-08!7;UBERON:0004089!3.82e-08!2;UBERON:0000341!5.02e-08!2;UBERON:0001041!5.37e-08!98;UBERON:0000072!3.32e-07!46;UBERON:0001557!7.64e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.01e-57;2!UBERON:0003127;1.13e-56;2!UBERON:0001044;3.16e-43;6!UBERON:0003293;3.16e-43;6!UBERON:0003294;3.16e-43;6!UBERON:0010047;3.16e-43;6!UBERON:0003408;3.16e-43;6!UBERON:0000167;3.16e-43;6!UBERON:0001831;9.99e-30;1!UBERON:0001567;9.99e-30;1!UBERON:0001736;1.33e-29;1!UBERON:0001041;4.77e-19;14!UBERON:0003126;4.73e-17;7!UBERON:0001005;4.73e-17;7!UBERON:0000165;9.64e-17;28!UBERON:0004089;1.33e-15;2!UBERON:0000341;2.21e-15;2!UBERON:0000161;3.02e-14;19!UBERON:0000166;3.02e-14;19!UBERON:0001723;1.04e-10;3!UBERON:0001033;1.04e-10;3!UBERON:0000153;5.57e-10;54!UBERON:0007811;1.03e-09;52!UBERON:0002365;7.90e-09;31!UBERON:0002330;7.90e-09;31!UBERON:0007196;1.71e-08;15!UBERON:0001558;1.71e-08;15!UBERON:0004921;1.83e-07;33!UBERON:0000033;4.55e-07;50!UBERON:0001004;5.07e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.02e-57,2;UBERON:0003127,6.36e-57,2;UBERON:0001044,3.16e-43,6;UBERON:0003293,3.16e-43,6;UBERON:0003294,3.16e-43,6;UBERON:0010047,3.16e-43,6;UBERON:0000167,3.16e-43,6;UBERON:0001831,9.99e-30,1;UBERON:0001567,9.99e-30,1;UBERON:0008801,9.99e-30,1;UBERON:0001736,1.33e-29,1;UBERON:0006298,1.33e-29,1;UBERON:0003408,2.55e-26,10;UBERON:0000166,4.16e-21,22;UBERON:0003126,4.02e-17,7;UBERON:0001005,4.02e-17,7;UBERON:0000165,3.69e-16,29;UBERON:0000930,3.69e-16,29;UBERON:0004089,1.33e-15,2;UBERON:0000341,2.37e-15,2;UBERON:0001004,4.96e-14,74;UBERON:0000161,4.00e-13,36;UBERON:0001041,5.68e-12,87;UBERON:0000153,9.12e-12,62;UBERON:0007811,9.12e-12,62;UBERON:0001723,1.20e-10,3;UBERON:0001033,1.20e-10,3;UBERON:0010056,1.20e-10,3;UBERON:0001444,8.97e-10,49;UBERON:0002365,5.24e-09,31;UBERON:0002330,5.24e-09,31;UBERON:0004921,8.36e-09,118;UBERON:0000033,1.31e-08,56;UBERON:0007196,1.59e-08,15;UBERON:0001558,1.59e-08,15;UBERON:0001007,3.37e-07,145;UBERON:0001555,3.37e-07,145;UBERON:0007026,3.37e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.7024349440022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.8484160644425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.5237570042724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49263787330687,0,0,0,0,0,0,0.870866991587845,1.02669990325584,0.202056159043763,1.57788851863888,1.99596213927608,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p38@NDRG2 | |||
}} |
Revision as of 03:42, 11 September 2013
Short description: | p38@NDRG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_38_at_NDRG2_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 30bp_to_ENST00000553567_5end |
EntrezGene: | NDRG2 |
HGNC: | 14460 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.02e-57 | 2 |
open tracheal system trachea | 6.36e-57 | 2 |
saliva-secreting gland | 3.16e-43 | 6 |
gland of oral region | 3.16e-43 | 6 |
gland of foregut | 3.16e-43 | 6 |
oral gland | 3.16e-43 | 6 |
oral cavity | 3.16e-43 | 6 |
parotid gland | 9.99e-30 | 1 |
cheek | 9.99e-30 | 1 |
parotid gland primordium | 9.99e-30 | 1 |
submandibular gland | 1.33e-29 | 1 |
submandibular gland primordium | 1.33e-29 | 1 |
gland of gut | 2.55e-26 | 10 |
oral opening | 4.16e-21 | 22 |
trachea | 4.02e-17 | 7 |
respiratory airway | 4.02e-17 | 7 |
mouth | 3.69e-16 | 29 |
stomodeum | 3.69e-16 | 29 |
midface | 1.33e-15 | 2 |
throat | 2.37e-15 | 2 |
respiratory system | 4.96e-14 | 74 |
orifice | 4.00e-13 | 36 |
foregut | 5.68e-12 | 87 |
anterior region of body | 9.12e-12 | 62 |
craniocervical region | 9.12e-12 | 62 |
tongue | 1.20e-10 | 3 |
gustatory system | 1.20e-10 | 3 |
future tongue | 1.20e-10 | 3 |
subdivision of head | 8.97e-10 | 49 |
exocrine gland | 5.24e-09 | 31 |
exocrine system | 5.24e-09 | 31 |
subdivision of digestive tract | 8.36e-09 | 118 |
head | 1.31e-08 | 56 |
tracheobronchial tree | 1.59e-08 | 15 |
lower respiratory tract | 1.59e-08 | 15 |
digestive system | 3.37e-07 | 145 |
digestive tract | 3.37e-07 | 145 |
primitive gut | 3.37e-07 | 145 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.