FFCP PHASE1:Hg19::chr14:65569186..65569243,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4149|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6913|TSSclassifier=S|UniProt=Q96CY8,Q14803,P61244,Q6V3B1,G3V2N4,G3V2R5,G3V563,Q8TAX8,A6NH73|association_with_transcript=0bp_to_ENST00000246163,ENST00000284165,ENST00000358402,ENST00000358664,ENST00000394606,ENST00000554709,ENST00000555667,ENST00000555932,ENST00000556443,ENST00000556702,ENST00000556979,ENST00000557746,NM_002382,NM_145112,NM_145113,NM_145114,NM_145116,NM_197957,uc001xic.1,uc001xie.1,uc001xif.1,uc001xig.1,uc001xih.1,uc001xii.1,uc001xij.1,uc001xik.2,uc010aql.1_5end|coexpression_cluster_id=C14|description=CAGE_peak_1_at_MAX_5end|id=chr14:65569186..65569243,-|ontology_enrichment_celltype=CL:0000738!1.40e-10!140;CL:0000037!9.91e-10!172;CL:0000566!9.91e-10!172;CL:0000988!4.90e-09!182;CL:0002032!1.49e-08!165;CL:0000837!1.49e-08!165;CL:0002087!9.63e-08!119;CL:0002031!9.68e-08!124;CL:0000791!4.82e-07!18;CL:0000789!4.82e-07!18;CL:0002420!4.82e-07!18;CL:0002419!4.82e-07!18;CL:0000790!4.82e-07!18;CL:0000838!6.32e-07!52;CL:0000542!9.17e-07!53;CL:0000051!9.17e-07!53|ontology_enrichment_celltype_v019=CL:0000791;4.78e-07;18!CL:0000789;4.78e-07;18!CL:0002419;4.78e-07;18|ontology_enrichment_celltype_v019_2=CL:0000738,1.57e-11,136;CL:0000037,1.60e-10,168;CL:0000988,5.91e-10,177;CL:0002032,2.69e-09,161;CL:0000837,2.69e-09,161;CL:0002087,1.38e-08,115;CL:0002031,1.46e-08,120;CL:0000791,4.82e-07,18;CL:0000789,4.82e-07,18;CL:0002420,4.82e-07,18;CL:0002419,4.82e-07,18;CL:0000790,4.82e-07,18;CL:0000838,6.32e-07,52;CL:0000542,9.17e-07,53;CL:0000051,9.17e-07,53|ontology_enrichment_development_v019=CL:0000790;4.78e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.44e-15!115;UBERON:0002193!1.04e-07!112;UBERON:0002390!3.54e-07!102;UBERON:0003061!3.54e-07!102|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.58e-15,114;UBERON:0002193,1.39e-08,108;UBERON:0002390,4.66e-08,98;UBERON:0003061,4.66e-08,98|phase1_expression=84.8438031193499,58.2353424983474,78.088739869168,42.0307853083148,51.4005258591381,72.4040975003306,53.1929744153452,61.9085475958294,64.2516645371603,55.7816035858425,71.1757191331876,61.8189083128388,74.6460548386524,40.3478310649752,25.5175979310495,28.9099812974263,32.5455045132948,36.5155045193687,52.2088094705842,61.1911658641636,41.0041389400949,54.8545762586654,28.0511267388436,28.4698804151599,24.3552720813917,58.3798419914348,58.2914185094615,58.40339973475,178.587381689402,87.5131027661645,60.2234719699536,42.2933763260306,55.1206831364198,47.6982673115156,75.6079877663744,54.8773237401447,71.9321076370376,58.723513304379,44.9219562333117,57.2908698689849,98.2988931913268,86.4796088270675,117.196883273555,62.9574373915515,63.8610344834088,64.0421921535835,56.01539789427,55.0964969949247,49.8627257141117,71.9230980805376,73.774283480381,67.6339177481354,50.3328693875463,65.1939530419664,46.0450054420762,58.7316099372927,42.3004532589661,58.2033824712769,53.2585972725371,62.5811602798383,60.7370269509089,63.3314496358495,83.974199858707,66.0648363325676,44.1118042715448,45.3908179752912,60.4137581525708,86.1782921830629,65.7068477209454,72.7582629762141,65.3831462844038,55.9782006701098,65.1912518128222,53.2363321506093,57.6157652905268,50.9470508585353,85.7067455647758,58.1184575296629,70.7192581467153,58.7126252106972,54.5031695525507,44.9353818260999,59.8387231168497,96.1203955821351,86.2823976247648,64.0095333849761,100.098996759003,103.455439191807,91.224192444311,84.9107841536474,50.0907412816315,58.7237189370939,71.867366887543,91.1982167195278,94.7259471438796,51.35989653114,101.895660918966,67.2048404301072,63.3252616918488,70.5527010548662,113.095026521856,99.8974870100287,60.3962858064525,66.4006323035635,71.2946296089106,60.4787532213286,58.2228307094784,57.5130025568281,52.2838577190711,57.882142420494,38.9653525078046,61.4382541758311,91.7893825973154,73.0386460684917,74.2202219015335,59.4874049162222,74.3447757587727,82.4705869158312,68.0622971532463,112.77215667073,89.8495166321858,79.8379717336634,112.178463712941,114.292043760896,147.418257331768,120.993175794493,105.925511602815,71.1671803583305,56.6973215061036,63.7227377084316,43.8852359365131,34.8764447045891,47.5648730057933,34.6981586289184,44.1177361359583,46.2060395485028,81.9144525462632,67.6422469720664,39.3264839402522,33.9245978117723,30.654340206901,59.1370525872173,69.5804000638756,52.651390875389,48.3575616545478,50.149364342189,48.6626135499046,70.8317154186866,74.3593384014166,76.5202452738904,74.7346651698811,61.0766562525348,57.9724637684682,57.096102134325,57.0519233245472,45.3944769201111,54.1296963330339,71.5814422899041,74.3551489015224,59.914989684876,51.1593232728617,44.8560542373922,54.1817767756936,54.0464728108427,48.6085168729056,50.2757470239369,52.0908144492714,47.4094332834787,52.1276567384003,44.6154859997021,48.5484621415579,263.560834872127,224.91255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2,61.816135034216,101.61944358101,51.2933957707502,33.1802423056435,120.122627134458,82.1523997340215,95.9683789736522,39.3324883971864,48.4538686964517,22.7858824198838,31.6079800794487,93.7407586616067,71.7249148647351,46.083607818217,99.2096623205684,86.0552544331316,23.5199167877834,114.585873273151,57.5604966931581,22.5115192780314,53.021407470432,36.9634266756018,95.504577110146,44.9154547135107,64.2007379610659,66.8815871026297,57.962695740557,56.0765790860358,81.7675887711285,83.0052402363155,39.8313243778973,78.3069069320167,89.0111672924829,72.4302869512769,67.2653191953094,16.4368569691709,15.3308589765221,37.742383343077,77.6950035200255,44.8758657320944,36.151083289487,46.0724421601835,71.3523114609925,54.2906350107156,38.7530943003266,94.7025736685306,80.0222887405716,60.9409803762411,69.1080712596769,93.9919251423863,66.2118850092305,42.4982748360118,35.354940742165,35.3463164481024,78.7164873594249,44.6219605435106,54.3840223237832,48.0461936087236,22.0364741954258,33.5140585210806,30.1781907866116,37.4027457303372,21.6434565215175,37.3851531548958,30.233642104993,29.2867916519347,118.771029328127,80.8670373864642,51.264585303406,69.3769750563552,32.5233635000244,56.3405300619893,123.274256135741,35.5030811170056,46.5600294244618,100.468808320463,94.366347993317,53.6684007316868,67.8504966701499,48.3465974250498,67.4829893855905,47.4718652360236,56.4237018587585,114.098308188555,41.6516924190007,84.0374818759706,40.5806142016551,53.4317108920554,54.3112726523457,59.1584804648215,51.9151874548547,22.457623620644,24.038425832013,30.5343387437563,27.4349952005931,30.997219010805,57.0667326111387,18.050942829051,53.2724248474223,26.2604847553055,41.458471972939,125.360790984617,63.1172586426903,28.8057962071126,86.2907835409042,90.5049334433608,39.3582837657953,73.1942320198896,19.4032501399891,61.1784061590461,28.063130688993,104.058921907538,77.3882596186978,27.6108095933191,67.6461162157198,57.8462214657218,55.9909618632126,37.9960604910863,28.1569130884145,77.6233170561202,32.1447980869433,105.855327095497,69.439458788904,65.7165409221627|short_description=p1@MAX}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4149 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6913 | |||
|TSSclassifier=S | |||
|UniProt=Q96CY8,Q14803,P61244,Q6V3B1,G3V2N4,G3V2R5,G3V563,Q8TAX8,A6NH73 | |||
|association_with_transcript=0bp_to_ENST00000246163,ENST00000284165,ENST00000358402,ENST00000358664,ENST00000394606,ENST00000554709,ENST00000555667,ENST00000555932,ENST00000556443,ENST00000556702,ENST00000556979,ENST00000557746,NM_002382,NM_145112,NM_145113,NM_145114,NM_145116,NM_197957,uc001xic.1,uc001xie.1,uc001xif.1,uc001xig.1,uc001xih.1,uc001xii.1,uc001xij.1,uc001xik.2,uc010aql.1_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_MAX_5end | |||
|id=chr14:65569186..65569243,- | |||
|ontology_enrichment_celltype=CL:0000738!1.40e-10!140;CL:0000037!9.91e-10!172;CL:0000566!9.91e-10!172;CL:0000988!4.90e-09!182;CL:0002032!1.49e-08!165;CL:0000837!1.49e-08!165;CL:0002087!9.63e-08!119;CL:0002031!9.68e-08!124;CL:0000791!4.82e-07!18;CL:0000789!4.82e-07!18;CL:0002420!4.82e-07!18;CL:0002419!4.82e-07!18;CL:0000790!4.82e-07!18;CL:0000838!6.32e-07!52;CL:0000542!9.17e-07!53;CL:0000051!9.17e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.78e-07;18!CL:0000789;4.78e-07;18!CL:0002419;4.78e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.57e-11,136;CL:0000037,1.60e-10,168;CL:0000988,5.91e-10,177;CL:0002032,2.69e-09,161;CL:0000837,2.69e-09,161;CL:0002087,1.38e-08,115;CL:0002031,1.46e-08,120;CL:0000791,4.82e-07,18;CL:0000789,4.82e-07,18;CL:0002420,4.82e-07,18;CL:0002419,4.82e-07,18;CL:0000790,4.82e-07,18;CL:0000838,6.32e-07,52;CL:0000542,9.17e-07,53;CL:0000051,9.17e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;4.78e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.44e-15!115;UBERON:0002193!1.04e-07!112;UBERON:0002390!3.54e-07!102;UBERON:0003061!3.54e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.58e-15,114;UBERON:0002193,1.39e-08,108;UBERON:0002390,4.66e-08,98;UBERON:0003061,4.66e-08,98 | |||
|phase1_expression=84.8438031193499,58.2353424983474,78.088739869168,42.0307853083148,51.4005258591381,72.4040975003306,53.1929744153452,61.9085475958294,64.2516645371603,55.7816035858425,71.1757191331876,61.8189083128388,74.6460548386524,40.3478310649752,25.5175979310495,28.9099812974263,32.5455045132948,36.5155045193687,52.2088094705842,61.1911658641636,41.0041389400949,54.8545762586654,28.0511267388436,28.4698804151599,24.3552720813917,58.3798419914348,58.2914185094615,58.40339973475,178.587381689402,87.5131027661645,60.2234719699536,42.2933763260306,55.1206831364198,47.6982673115156,75.6079877663744,54.8773237401447,71.9321076370376,58.723513304379,44.9219562333117,57.2908698689849,98.2988931913268,86.4796088270675,117.196883273555,62.9574373915515,63.8610344834088,64.0421921535835,56.01539789427,55.0964969949247,49.8627257141117,71.9230980805376,73.774283480381,67.6339177481354,50.3328693875463,65.1939530419664,46.0450054420762,58.7316099372927,42.3004532589661,58.2033824712769,53.2585972725371,62.5811602798383,60.7370269509089,63.3314496358495,83.974199858707,66.0648363325676,44.1118042715448,45.3908179752912,60.4137581525708,86.1782921830629,65.7068477209454,72.7582629762141,65.3831462844038,55.9782006701098,65.1912518128222,53.2363321506093,57.6157652905268,50.9470508585353,85.7067455647758,58.1184575296629,70.7192581467153,58.7126252106972,54.5031695525507,44.9353818260999,59.8387231168497,96.1203955821351,86.2823976247648,64.0095333849761,100.098996759003,103.455439191807,91.224192444311,84.9107841536474,50.0907412816315,58.7237189370939,71.867366887543,91.1982167195278,94.7259471438796,51.35989653114,101.895660918966,67.2048404301072,63.3252616918488,70.5527010548662,113.095026521856,99.8974870100287,60.3962858064525,66.4006323035635,71.2946296089106,60.4787532213286,58.2228307094784,57.5130025568281,52.2838577190711,57.882142420494,38.9653525078046,61.4382541758311,91.7893825973154,73.0386460684917,74.2202219015335,59.4874049162222,74.3447757587727,82.4705869158312,68.0622971532463,112.77215667073,89.8495166321858,79.8379717336634,112.178463712941,114.292043760896,147.418257331768,120.993175794493,105.925511602815,71.1671803583305,56.6973215061036,63.7227377084316,43.8852359365131,34.8764447045891,47.5648730057933,34.6981586289184,44.1177361359583,46.2060395485028,81.9144525462632,67.6422469720664,39.3264839402522,33.9245978117723,30.654340206901,59.1370525872173,69.5804000638756,52.651390875389,48.3575616545478,50.149364342189,48.6626135499046,70.8317154186866,74.3593384014166,76.5202452738904,74.7346651698811,61.0766562525348,57.9724637684682,57.096102134325,57.0519233245472,45.3944769201111,54.1296963330339,71.5814422899041,74.3551489015224,59.914989684876,51.1593232728617,44.8560542373922,54.1817767756936,54.0464728108427,48.6085168729056,50.2757470239369,52.0908144492714,47.4094332834787,52.1276567384003,44.6154859997021,48.5484621415579,263.560834872127,224.912553206029,49.7147219442489,48.2062793144459,62.1755812273087,37.6042073509541,26.6758057296397,45.0428845391913,43.7328528111,45.9020681637731,64.8735652337131,63.4870512215523,34.7553533939795,34.3269996538263,83.5493000600021,44.3655461849599,59.0490008221167,56.500973906288,61.0404849052561,49.1686159015426,29.1237556636537,24.7665604883241,29.0733169873654,47.3637677311352,29.6030704721361,44.0167827808761,73.6561771514873,62.5585331074749,105.578717984811,82.6410863088674,37.0339450698946,29.6530892096555,53.1963101729631,39.0690082583946,44.7472181866569,56.0387959721606,37.546052625967,22.7824837324855,45.0606090407177,52.3471795864118,17.4052835728953,60.9040447799174,27.0522567047911,50.4376680658608,22.7848048525709,49.4005616167277,26.7579800698761,61.8575318876252,63.5269003297931,23.7856426986132,45.640700497121,32.3860731313031,61.4569513059284,65.4590689418003,69.9803212749169,38.0557963124338,30.2167871772986,28.235128117293,30.1653670094728,32.8017106138317,10.9493207722749,67.2732989018209,73.3294669539889,62.1607146086162,50.6161041554857,50.531563716871,35.3737332119133,28.6593973132773,26.99323534695,35.0734833289013,27.6706893997356,28.4724742933316,32.4943452665996,33.9463134666849,28.8560367709793,56.0998145514733,54.6942917833439,56.3856395524018,61.7436587819276,26.6185573125845,23.587853200263,34.2658145875214,54.7414243274167,61.740196148643,44.4360628673181,75.7276969319516,47.2087363682002,44.1322188887059,42.127742547131,72.6552520842024,18.7188261350324,36.0828355063183,48.227048469632,68.8014948221915,53.5599521193584,43.0576526696248,42.8071842527846,42.6710374898009,38.6318772942693,87.8994711732009,58.2670620196702,64.2086621087306,58.1149770718017,50.3946384596579,49.3377338403505,45.6748465784526,33.4229029291056,49.4563656123122,112.327218240275,64.9797443017608,113.408479200802,106.792885481968,132.17582779742,58.7355522202564,103.900851751852,78.5356896307315,41.0573870454493,53.3674687130249,70.5806185933206,90.6069791438933,73.670122414902,51.4432881223271,53.0235806485469,59.4649892485778,1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| |||
|short_description=p1@MAX | |||
}} | |||
Revision as of 05:11, 11 September 2013
| Short description: | p1@MAX |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_MAX_5end |
| Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
| Association with transcript: | 0bp_to_ENST00000246163, ENST00000284165, ENST00000358402, ENST00000358664, ENST00000394606, ENST00000554709, ENST00000555667, ENST00000555932, ENST00000556443, ENST00000556702, ENST00000556979, ENST00000557746, NM_002382, NM_145112, NM_145113, NM_145114, NM_145116, NM_197957, uc001xic.1, uc001xie.1, uc001xif.1, uc001xig.1, uc001xih.1, uc001xii.1, uc001xij.1, uc001xik.2, uc010aql.1_5end |
| EntrezGene: | MAX |
| HGNC: | 6913 |
| UniProt: | Q96CY8Q14803P61244Q6V3B1G3V2N4G3V2R5G3V563Q8TAX8A6NH73 |
| Genome view: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 1.57e-11 | 136 |
| hematopoietic stem cell | 1.60e-10 | 168 |
| hematopoietic cell | 5.91e-10 | 177 |
| hematopoietic oligopotent progenitor cell | 2.69e-09 | 161 |
| hematopoietic multipotent progenitor cell | 2.69e-09 | 161 |
| nongranular leukocyte | 1.38e-08 | 115 |
| hematopoietic lineage restricted progenitor cell | 1.46e-08 | 120 |
| mature alpha-beta T cell | 4.82e-07 | 18 |
| alpha-beta T cell | 4.82e-07 | 18 |
| immature T cell | 4.82e-07 | 18 |
| mature T cell | 4.82e-07 | 18 |
| immature alpha-beta T cell | 4.82e-07 | 18 |
| lymphoid lineage restricted progenitor cell | 6.32e-07 | 52 |
| lymphocyte | 9.17e-07 | 53 |
| common lymphoid progenitor | 9.17e-07 | 53 |
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 6.58e-15 | 114 |
| hemolymphoid system | 1.39e-08 | 108 |
| hematopoietic system | 4.66e-08 | 98 |
| blood island | 4.66e-08 | 98 |
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