FFCP PHASE1:Hg19::chr16:447255..447266,+: Difference between revisions
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{{FFCP | 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4736,2.83078695340614,0.655257829152084,2.20652288940233,2.55089904122019,3.09839410647505,7.82102885162541,6.67809136372179,0.157723490002507,0.80057074828547,9.16957453595778,5.5124185923576,2.24802287837608,1.41696576325585,0.957803154342908,2.87162909937057,0.504143392443436,2.14387482639075,2.42213468447777,0,0,0,0,1.5018336599544,4.19520305013884,0.690359926060101,2.58591088751157,4.58783002930469,0.60511520611056,0,0,1.31017534008077,0.295712172434091,1.95858995393344,1.56215619722769,1.2401207790071,1.26831620387814,0,7.12735096914337,4.96211178389294,0.351742488719241,1.78867398695433,1.60710550763486,0,3.03482802118316,0.455324382702595,2.7497734750418,0.576169937778896,5.31612829255997,2.17503145525861,1.18390992413128,2.48207065856333,2.44709084162552,6.20095433519061,1.09980912941201,0.560544326627578,0.913158720509496,1.51149313853035,0.47775168788705,6.07550625501579,0.47404083519818,12.9027982158619,1.04314963381548,1.60342272946051,2.90102629828252,0.6828739083758,0,1.72090943528111,1.30165200803622,2.72682895229305,6.77419280305486,0.9164274741762,0.93061915699296,0.955538938977433,0.894843454382338,0,0.243835849964539,1.29485767437579,0.718639647993729,1.1598144313382,3.39997695141398,1.16969731731053,1.19370465096821,3.92436299565976,0.79062257427272,0,0.603851374266694,2.08370226891451,1.96703604453562,0,12.2574160876953,1.64973582971138,2.55201007249429,0.297046400327086,0.8453114551668,6.11737612876141,1.03382309777839,2.12711030312805,0.299823467774787,0.357107877211315,0.352894871715692,0.561689566824178,5.11235471772562,2.2936464170227,1.43339583151451,6.94194873650012,2.51568513706384,1.30905207102113,2.645134202577,6.32391530883477,5.0839319149456,9.08515780459957,6.93915336592934,3.27796715891087,4.30774903438886,2.54972074354954,0.801652215796681,1.37842349302267,0.250707539292375,2.57647573942014,2.94760543171796,1.65833887891756,1.13776295448085,1.70587185520785,1.90451545170992,0.516711278688049,0.434523000071005,2.01837352645104,2.16400338145761,1.61693751166575,0.870866991587845,1.71116650542641,1.14498490124799,1.5061663132462,0.665320713092027,0.488419611665847,1.92109222579888,3.8614456457388,1.79650404213174,9.38563769613817,2.68931177202306,4.88275413978886,1.33151354837103,2.21401172950129,0.961705476909699|short_description=p4@NME4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4833 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7852 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=47bp_to_ENST00000460297_5end | |||
|coexpression_cluster_id=C2373 | |||
|description=CAGE_peak_4_at_NME4_5end | |||
|id=chr16:447255..447266,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.60e-27!180;CL:0000222!2.24e-18!119;CL:0000183!4.79e-18!59;CL:0000192!8.58e-17!42;CL:0000514!8.58e-17!42;CL:0000680!1.43e-16!57;CL:0000056!1.43e-16!57;CL:0000355!1.43e-16!57;CL:0000187!4.64e-16!54;CL:0000393!9.84e-15!60;CL:0000211!9.84e-15!60;CL:0000220!1.52e-14!246;CL:0002321!3.10e-14!248;CL:0000359!2.22e-13!32;CL:0000144!7.03e-10!625;CL:0000057!8.53e-10!75;CL:0002371!1.18e-08!591;CL:0000136!1.50e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.26e-13;32!CL:0000192;3.48e-12;43!CL:0000187;3.09e-09;55!CL:0000393;4.52e-08;61!CL:0000211;4.52e-08;61!CL:0000136;8.56e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.91e-19,121;CL:0000680,4.60e-17,58;CL:0000056,4.60e-17,58;CL:0000355,4.60e-17,58;CL:0000192,6.44e-17,43;CL:0000514,6.44e-17,43;CL:0000187,1.55e-16,55;CL:0000393,3.05e-15,61;CL:0000211,3.05e-15,61;CL:0002321,9.27e-14,250;CL:0000359,1.16e-13,32;CL:0000057,8.61e-10,76;CL:0000136,1.08e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;3.48e-12;43!CL:0000355;6.69e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;9.40e-08;42!UBERON:0003509;9.40e-08;42!UBERON:0004572;9.40e-08;42!UBERON:0004573;1.00e-07;33!UBERON:0004571;1.00e-07;33 | |||
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| |||
|short_description=p4@NME4 | |||
}} |
Revision as of 10:25, 11 September 2013
Short description: | p4@NME4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NME4_5end |
Coexpression cluster: | C2373_Mesenchymal_Renal_leiomyoblastoma_Hepatic_Pericytes_Fibroblast_Smooth |
Association with transcript: | 47bp_to_ENST00000460297_5end |
EntrezGene: | NME4 |
HGNC: | 7852 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.91e-19 | 121 |
muscle precursor cell | 4.60e-17 | 58 |
myoblast | 4.60e-17 | 58 |
multi-potent skeletal muscle stem cell | 4.60e-17 | 58 |
smooth muscle cell | 6.44e-17 | 43 |
smooth muscle myoblast | 6.44e-17 | 43 |
muscle cell | 1.55e-16 | 55 |
electrically responsive cell | 3.05e-15 | 61 |
electrically active cell | 3.05e-15 | 61 |
embryonic cell | 9.27e-14 | 250 |
vascular associated smooth muscle cell | 1.16e-13 | 32 |
fibroblast | 8.61e-10 | 76 |
fat cell | 1.08e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.