FFCP PHASE1:Hg19::chr18:48723813..48723829,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51320|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28040|TSSclassifier=S|UniProt=Q5U5Q3|association_with_transcript=-123bp_to_ENST00000406189,uc002lfc.3_5end|description=CAGE_peak_5_at_MEX3C_5end|id=chr18:48723813..48723829,-|ontology_enrichment_celltype=CL:0000542!4.79e-12!53;CL:0000051!4.79e-12!53;CL:0000838!1.67e-11!52;CL:0000066!4.91e-08!254;CL:0000791!1.95e-07!18;CL:0000789!1.95e-07!18;CL:0002420!1.95e-07!18;CL:0002419!1.95e-07!18;CL:0000790!1.95e-07!18;CL:0000084!7.38e-07!25;CL:0000827!7.38e-07!25|ontology_enrichment_celltype_v019=CL:0000791;3.10e-09;18!CL:0000789;3.10e-09;18!CL:0002419;3.10e-09;18!CL:0000542;6.61e-09;53!CL:0000084;1.89e-07;25!CL:0000236;8.83e-07;13|ontology_enrichment_celltype_v019_2=CL:0000542,9.23e-15,53;CL:0000051,9.23e-15,53;CL:0000838,5.57e-14,52;CL:0000791,6.71e-10,18;CL:0000789,6.71e-10,18;CL:0002420,6.71e-10,18;CL:0002419,6.71e-10,18;CL:0000790,6.71e-10,18;CL:0000084,6.30e-08,25;CL:0000827,6.30e-08,25|ontology_enrichment_development_v019=CL:0000790;3.10e-09;18!CL:0000051;6.61e-09;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.54503513781167,0.214100523890983,0.563817616383885,1.0007329835313,0,0,0,0,0,0.737201809504527,1.39560233594486,1.96597234917155,3.69273769519835,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.984968464614303,1.02000345622126,0.313454721478088,0.572471974262113,1.09499540058307,0.753255837568817,0.534893840235659,0.328402357799783,0.157421562627358,6.29382842958246,1.91914699048606,1.08371286321253,0,1.50602959389125,1.10926203050036,1.54934401160603,1.84820002233648,1.76160263600908,1.66198622559563,1.80490002723128,1.73608696572681,0,0.32389366601898,0,0.581592955118259,0,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,1.35426486594342,0.376484679085209,0,0,0,0.641858054152187,0.639337125799041,0.329851300186716,0,1.27867425159808,0,0,0,0.75374599577023,0,0,0,0.736555271975129,0,0.211255286311942,0.212604299965044,0,0.22465726229299,0.600707571366025,0,0.570025487482497,0.59675003159727,0,0,2.18455444504853,0.889509253863555,3.84057200309856,3.60356388332411,2.29900975981793,1.98313461835459,3.81621501814146,2.84606484554724,3.52342313622563,2.6759125968766,1.32171328579026,4.48406850385229,1.05353633910031,1.96709770113833,2.75107533924415,1.85041349099558,2.17342444007882,2.93330039970231,2.8406868344084,0,2.22820913770347,2.3568472597987,1.99380505125259,3.5204502289452,2.94610035369053,2.21100890851793,0.986627427622057,2.21080014228679,1.15921234294021,1.03800594213442,0.802622484269139,2.09071047609954,1.13309342697566,3.83220493601921,1.71813722741315,1.01207876807801,0.637130828648193,2.60433381542567,0,1.35517607169996,1.66382594500744,3.74792179657038,2.13099526839615,0.821127996921047,2.62088766192152,4.01160293675261,3.33096128930438,0,0,0.383587685530591,0.361439152384566,0.50133791063589,1.01392563272577,0,1.45990461090791,0.945348171640679,1.77383517970051,0.702678285545008,0.392937226493138,0.728590576585084,1.48313777113772,0,0.348259474598534,0.132957960518865,5.24679373471752,8.00792875092179,5.94332002127304,0.39752481473341,0.860234595106124,0,1.13061588384802,1.25849830862972,0.550236083880135,0.626984899610432,1.03366703667732,1.42306505074684,0,0,0,0.732186172644509,0.735326160691737,2.43042584364528,0.714397826272638,0.898117490504679,0.225222960966644,0,0,0.732806975721629,2.63560834872127,3.87780264148325,0.872188104285069,0.496971951695318,0.633152558322899,0.264818361626438,0.286836620748814,1.77334191099179,1.12135520028461,1.06748995729705,0.98667019366864,0.622422070799533,0.942974704487816,0.980771418680752,0.302714855289863,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,0.597794722207204,0.939475989150119,0.161872944368132,0.421352420106746,1.22492502752936,0.491337269247072,0.516628905878827,1.18800285728205,0,0,0,0.673344455816265,1.25118519871964,0,0,0,0.45071417671979,0.567160915800105,0.358779271377724,0.427114777637135,0.423863802319124,0.600182192168805,0.103052529238439,0.257640540045629,0.37223371266318,0.506328996723799,1.16924406193438,0.504867548488229,0.276149695926898,0.323292113637624,0,0.302256294682921,0,2.31913023795956,1.63647672354501,3.15485054927904,1.46368447355514,1.98794652482228,0.813357600086629,1.7622379352613,1.7662459561294,2.18986415445498,0,0.643240938192885,0,0,0.721879481669586,0.591534000199219,0.337169380156203,0.482022059766964,0.441175890929576,0.217879444092406,0,0.134831308160164,0.196221465125346,0,1.4763109092493,0,0.4115740113314,0,2.53510069643662,0,0.590789906681404,0.882926198829301,0.614942192715568,0.171567810298526,3.95101027471052,0,1.20634766893957,2.12953423864618,0.325808305310325,0,1.44331342025273,0.463721619900307,1.05667824812239,0.288732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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51320 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28040 | |||
|TSSclassifier=S | |||
|UniProt=Q5U5Q3 | |||
|association_with_transcript=-123bp_to_ENST00000406189,uc002lfc.3_5end | |||
|description=CAGE_peak_5_at_MEX3C_5end | |||
|id=chr18:48723813..48723829,- | |||
|ontology_enrichment_celltype=CL:0000542!4.79e-12!53;CL:0000051!4.79e-12!53;CL:0000838!1.67e-11!52;CL:0000066!4.91e-08!254;CL:0000791!1.95e-07!18;CL:0000789!1.95e-07!18;CL:0002420!1.95e-07!18;CL:0002419!1.95e-07!18;CL:0000790!1.95e-07!18;CL:0000084!7.38e-07!25;CL:0000827!7.38e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.10e-09;18!CL:0000789;3.10e-09;18!CL:0002419;3.10e-09;18!CL:0000542;6.61e-09;53!CL:0000084;1.89e-07;25!CL:0000236;8.83e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.23e-15,53;CL:0000051,9.23e-15,53;CL:0000838,5.57e-14,52;CL:0000791,6.71e-10,18;CL:0000789,6.71e-10,18;CL:0002420,6.71e-10,18;CL:0002419,6.71e-10,18;CL:0000790,6.71e-10,18;CL:0000084,6.30e-08,25;CL:0000827,6.30e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;3.10e-09;18!CL:0000051;6.61e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p5@MEX3C | |||
}} |
Revision as of 17:41, 11 September 2013
Short description: | p5@MEX3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MEX3C_5end |
Coexpression cluster: | NA |
Association with transcript: | -123bp_to_ENST00000406189, uc002lfc.3_5end |
EntrezGene: | MEX3C |
HGNC: | 28040 |
UniProt: | Q5U5Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.23e-15 | 53 |
common lymphoid progenitor | 9.23e-15 | 53 |
lymphoid lineage restricted progenitor cell | 5.57e-14 | 52 |
mature alpha-beta T cell | 6.71e-10 | 18 |
alpha-beta T cell | 6.71e-10 | 18 |
immature T cell | 6.71e-10 | 18 |
mature T cell | 6.71e-10 | 18 |
immature alpha-beta T cell | 6.71e-10 | 18 |
T cell | 6.30e-08 | 25 |
pro-T cell | 6.30e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.