FFCP PHASE1:Hg19::chr20:33734877..33734906,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55741|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=15877|TSSclassifier=W|UniProt=|association_with_transcript=254bp_to_NR_026728,uc002xbn.2,uc010zut.1_5end|coexpression_cluster_id=C7|description=CAGE_peak_4_at_EDEM2_5end|id=chr20:33734877..33734906,-|ontology_enrichment_celltype=CL:0000066!5.78e-23!254;CL:0000223!2.63e-10!59;CL:0002076!3.71e-08!43|ontology_enrichment_celltype_v019=CL:0002322;2.12e-09;5!CL:0000039;3.04e-09;7!CL:0000586;3.04e-09;7!CL:0002368;9.06e-07;13|ontology_enrichment_celltype_v019_2=CL:0000066,7.78e-11,253;CL:0002322,1.61e-09,5;CL:0000039,2.58e-09,7;CL:0000586,2.58e-09,7;CL:0000223,1.22e-07,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.43e-13!106;DOID:0050687!1.66e-09!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,8.25e-07,106|ontology_enrichment_uberon=UBERON:0004119!6.15e-08!169;UBERON:0000925!6.15e-08!169;UBERON:0006595!6.15e-08!169;UBERON:0005177!2.21e-07!107;UBERON:0005911!2.91e-07!82|ontology_enrichment_uberon_v019=UBERON:0003135;3.37e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.87e-07,11|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,2.45733936501509,11.1648186875588,0.655324116390517,0.791300934685361,0.123766352960047,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0.382067028739756,0,0.0787107813136792,0,0,0.154816123316076,1.83884244895785,1.204823675113,2.21852406100073,0,0.142169232487422,0.587200878669695,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0.145398238779565,0.377875943688809,0,0.232429036905685,0.411167888021826,1.23882548358041,18.7000055009398,20.4928565223281,27.1954564371873,0,1.29096936716765,1.35426486594342,0.188242339542605,0.818718450173537,0.224723484445085,0.612167784741805,0.320929027076094,0,12.5343494070952,13.7629923758926,11.08184351385,1.16083695451434,0,0.622822248995575,11.8086872670669,10.9511412868242,18.4610517999349,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,1.20118796110804,0,0,0,0,0,0.382273228125229,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.283604451492204,0,0.087834785693126,0.589405839739707,1.82147644146271,1.11235332835329,0.324547393654683,0,0.26591592103773,0.238490624305342,0.571994910780128,0,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0,0,0.33472061276467,0.805658634218294,0,1.22031028774085,1.10298924103761,0,0.714397826272638,0.44905874525234,0.450445921933289,0,0,0.732806975721629,0,3.87780264148325,0.872188104285069,0,0.12663051166458,0,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0.312160076830321,0,0,0,0,0.140450806702248,0,0,0,0,0,0.910161361938026,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0.966304265816484,1.09098448236334,0.573609190778008,2.6834215348511,2.38553582978673,2.78865462886844,2.59152637538426,4.03713361401005,1.45990943630332,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.55146986366197,0.217879444092406,0.237270619111097,0.404493924480493,0,0.769494313892781,0.738155454624648,0,0,0,8.87285243752816,1.96565443335525,3.54473944008842,0,3.81264159483652,0.514703430895577,1.42675371031213,1.1240175325762,0.603173834469785,0.555530670951178,0,0,0,0.231860809950154,0,0.288732895522148,0.925971025153221,0.761016608938393,0.790204397959275,0,0.984868024349589,1.17002132569619,0.594524649154913,2.81201501960331,1.51183915378974,0.708875486211932,1.70161193135412,0.290633938513962,0.766765358330422,2.46331618947972,1.32072651019839,0.414656231081544,0.864719720501769,0.88369703398466,0.063497894292169,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0.207970861530807,0.535286966391485,0,0,0,2.27407504055985,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0.909382714338778,0,0.907170879989041,0.248107807818777,0,0.280660094433074,0.256278298511402,0,0,0,0,0.177561725313127,0.246381468041427,0,0.116210378459959,1.93375119346596,0.802025881213139,0.736647911487171,0.114814448164607,0,0,0.902399225814824,0.462092022626489,0,1.46139224653261,0.422206515571503,0,0.170093705276516,0.431831832204279,0,0.812839312631559,0,0.254876273045038,2.49322802678617,0.671624264166535,0,0,0,0.328014645699706,0.976135183992909,2.7821073144885,0,0,0,3.25030123018261,0,0.096670718292122,0,0,0,0,0.290033387828457,0,0.0890320356467374,1.4875642382488,1.15314040419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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55741 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=15877 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=254bp_to_NR_026728,uc002xbn.2,uc010zut.1_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_4_at_EDEM2_5end | |||
|id=chr20:33734877..33734906,- | |||
|ontology_enrichment_celltype=CL:0000066!5.78e-23!254;CL:0000223!2.63e-10!59;CL:0002076!3.71e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.12e-09;5!CL:0000039;3.04e-09;7!CL:0000586;3.04e-09;7!CL:0002368;9.06e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.78e-11,253;CL:0002322,1.61e-09,5;CL:0000039,2.58e-09,7;CL:0000586,2.58e-09,7;CL:0000223,1.22e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.43e-13!106;DOID:0050687!1.66e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.25e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.15e-08!169;UBERON:0000925!6.15e-08!169;UBERON:0006595!6.15e-08!169;UBERON:0005177!2.21e-07!107;UBERON:0005911!2.91e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;3.37e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.87e-07,11 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,2.45733936501509,11.1648186875588,0.655324116390517,0.791300934685361,0.123766352960047,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0.382067028739756,0,0.0787107813136792,0,0,0.154816123316076,1.83884244895785,1.204823675113,2.21852406100073,0,0.142169232487422,0.587200878669695,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0.145398238779565,0.377875943688809,0,0.232429036905685,0.411167888021826,1.23882548358041,18.7000055009398,20.4928565223281,27.1954564371873,0,1.29096936716765,1.35426486594342,0.188242339542605,0.818718450173537,0.224723484445085,0.612167784741805,0.320929027076094,0,12.5343494070952,13.7629923758926,11.08184351385,1.16083695451434,0,0.622822248995575,11.8086872670669,10.9511412868242,18.4610517999349,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,1.20118796110804,0,0,0,0,0,0.382273228125229,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.283604451492204,0,0.087834785693126,0.589405839739707,1.82147644146271,1.11235332835329,0.324547393654683,0,0.26591592103773,0.238490624305342,0.571994910780128,0,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0,0,0.33472061276467,0.805658634218294,0,1.22031028774085,1.10298924103761,0,0.714397826272638,0.44905874525234,0.450445921933289,0,0,0.732806975721629,0,3.87780264148325,0.872188104285069,0,0.12663051166458,0,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0.312160076830321,0,0,0,0,0.140450806702248,0,0,0,0,0,0.910161361938026,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0.966304265816484,1.09098448236334,0.573609190778008,2.6834215348511,2.38553582978673,2.78865462886844,2.59152637538426,4.03713361401005,1.45990943630332,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.55146986366197,0.217879444092406,0.237270619111097,0.404493924480493,0,0.769494313892781,0.738155454624648,0,0,0,8.87285243752816,1.96565443335525,3.54473944008842,0,3.81264159483652,0.514703430895577,1.42675371031213,1.1240175325762,0.603173834469785,0.555530670951178,0,0,0,0.231860809950154,0,0.288732895522148,0.925971025153221,0.761016608938393,0.790204397959275,0,0.984868024349589,1.17002132569619,0.594524649154913,2.81201501960331,1.51183915378974,0.708875486211932,1.70161193135412,0.290633938513962,0.766765358330422,2.46331618947972,1.32072651019839,0.414656231081544,0.864719720501769,0.88369703398466,0.063497894292169,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0.207970861530807,0.535286966391485,0,0,0,2.27407504055985,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0.909382714338778,0,0.907170879989041,0.248107807818777,0,0.280660094433074,0.256278298511402,0,0,0,0,0.177561725313127,0.246381468041427,0,0.116210378459959,1.93375119346596,0.802025881213139,0.736647911487171,0.114814448164607,0,0,0.902399225814824,0.462092022626489,0,1.46139224653261,0.422206515571503,0,0.170093705276516,0.431831832204279,0,0.812839312631559,0,0.254876273045038,2.49322802678617,0.671624264166535,0,0,0,0.328014645699706,0.976135183992909,2.7821073144885,0,0,0,3.25030123018261,0,0.096670718292122,0,0,0,0,0.290033387828457,0,0.0890320356467374,1.4875642382488,1.15314040419064,0.765676274967505,1.31505115112215,0,0,0,0,0,0,0.18532421910392,0.572499546967965,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0.808729926293264,0,0,0,0,1.05650146756755,0.136499911407986,0.141405431953713,0,0.551365343546124,1.32687795048244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11688647996127,0,0,2.54188262097304,0.86101074534246,0,1.33029046061003,0.459446800413919,0,0.764637207142375,0.569647187174163,0.476463550915578,0.822724546172388,1.29694662238543,0.540031437238115,0,6.08897205426597,0.962479855263359,0.735120647943095,0,0.432807638929335,0,0.159426272728822,0,0.383010740264733,0.423347165447766,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,1.30998378285754,0.293016358543788,0.121360521749513,0.445773537109913,0.852408440419239,0.23874448473769,0.593929361665277,0.307160702099232,0,0.140669416410513,0.222617410045812,0.329607748453519,0.422250816255987,0,0.276283915531148,1.0077309914171,0.102268682502155,0.492339221844278,0,1.52776196950456,1.9692329214317,0,0.0986434056369336,0,0,0.969332746095218,0,1.99613798001194,0.520855522170466,0.787139999965761,0,0.910347586283997,0.508507300585533,0.47277536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| |||
|short_description=p4@EDEM2 | |||
}} |
Revision as of 08:11, 12 September 2013
Short description: | p4@EDEM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_EDEM2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 254bp_to_NR_026728, uc002xbn.2, uc010zut.1_5end |
EntrezGene: | EDEM2 |
HGNC: | 15877 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.78e-11 | 253 |
embryonic stem cell | 1.61e-09 | 5 |
germ line cell | 2.58e-09 | 7 |
germ cell | 2.58e-09 | 7 |
endodermal cell | 1.22e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.87e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.25e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.