FFCP PHASE1:Hg19::chr3:139063416..139063437,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56945|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14508|TSSclassifier=S|UniProt=G5E9W7|association_with_transcript=9bp_to_ENST00000478464,uc003ete.2_5end|description=CAGE_peak_5_at_MRPS22_5end|id=chr3:139063416..139063437,+|ontology_enrichment_celltype=CL:0000066!5.49e-15!254|ontology_enrichment_celltype_v019=CL:0000039;4.87e-07;7!CL:0000586;4.87e-07;7|ontology_enrichment_celltype_v019_2=CL:0000066,1.26e-09,253;CL:0000039,4.98e-07,7;CL:0000586,4.98e-07,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!9.45e-22!239;DOID:162!5.64e-21!235;DOID:305!2.90e-14!106;DOID:0050687!3.50e-12!143;DOID:0050686!6.71e-09!137|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:162,1.25e-09,235;DOID:14566,3.07e-09,239;DOID:305,4.04e-09,106;DOID:0050687,1.87e-08,143|ontology_enrichment_uberon=UBERON:0005156!4.16e-07!59;UBERON:0000990!4.16e-07!59|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.908391896352783,0.428201047781966,0.845726424575827,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.309868802321207,0.142169232487422,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.639312809217652,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.43917392846563,0.196468613246569,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0.775250277507987,0.71153252537342,1.00416183829401,0,2.28081631715554,1.70843440283719,0.735326160691737,0,1.42879565254528,1.79623498100936,0.112611480483322,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0,0.506522046658319,0.397227542439656,0.286836620748814,0.354668382198357,0,1.06748995729705,0.49333509683432,0,0.67355336034844,0,0,0,0.468642863667593,0,0,0.149448680551801,0,0.323745888736263,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,0,0.505008341862199,0.500474079487857,0.831192346452549,0,0,0.150238058906597,0.453728732640084,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0.37223371266318,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0.201504196455281,0.339121184620975,0.386521706326594,0.545492241181669,0,0.853815942907168,1.45782745153634,1.51052125730374,0.621966330092223,2.27088765788066,1.09493207722749,0,0,0,0,0,1.18306800039844,1.01150814046861,0.241011029883482,0.772057809126758,0.653638332277218,1.18635309555548,0.943819157121151,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0.514703430895577,0.98775256867763,0,0.804231779293047,0.370353780634118,0,0,0,0.115930404975077,0.352226082707465,0.721832238805369,0.462985512576611,1.14152491340759,0,0,0,0,0.297262324577456,3.74935335947108,1.00789276919316,0.992425680696705,0.806026704325635,0.581267877027924,0,5.91195885475132,0.264145302039678,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0.2933531432838,0.387815147273333,0,0,0.797814349754612,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0.791951872933429,0.602878754119172,0.871533458600294,0.299918973546171,0,0,0,0.239624855491583,0,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.415941723061614,0.713715955188647,0.315404830067869,0.468565659970853,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0.992431231275107,0.306923946576125,0,1.15325234330131,1.02341449813341,0.64341568457443,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.966875596732978,0.802025881213139,0.0920809889358963,0.803701137152247,0,0.131124414959424,0,0,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0.412164046590889,0.183138929636687,1.15513299888823,0.574265537996172,0.650060246036521,1.6068392984416,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0.576570202095319,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,0.565621727814851,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0.717056761020258,0.88424136911809,0,0,0,0,0,0,0.384888450902048,0,0,0.470719003883896,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0.557409525377156,0.144269212976445,0,0.159426272728822,0,0.957526850661834,0.635020748171649,0.973865820823666,0.280797178113459,0.228234679033192,0.313359791546046,0,0.67716711120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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56945 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14508 | |||
|TSSclassifier=S | |||
|UniProt=G5E9W7 | |||
|association_with_transcript=9bp_to_ENST00000478464,uc003ete.2_5end | |||
|description=CAGE_peak_5_at_MRPS22_5end | |||
|id=chr3:139063416..139063437,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.49e-15!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.87e-07;7!CL:0000586;4.87e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.26e-09,253;CL:0000039,4.98e-07,7;CL:0000586,4.98e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!9.45e-22!239;DOID:162!5.64e-21!235;DOID:305!2.90e-14!106;DOID:0050687!3.50e-12!143;DOID:0050686!6.71e-09!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.25e-09,235;DOID:14566,3.07e-09,239;DOID:305,4.04e-09,106;DOID:0050687,1.87e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0005156!4.16e-07!59;UBERON:0000990!4.16e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p5@MRPS22 | |||
}} |
Revision as of 21:46, 12 September 2013
Short description: | p5@MRPS22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MRPS22_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000478464, uc003ete.2_5end |
EntrezGene: | MRPS22 |
HGNC: | 14508 |
UniProt: | G5E9W7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.26e-09 | 253 |
germ line cell | 4.98e-07 | 7 |
germ cell | 4.98e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.25e-09 | 235 |
disease of cellular proliferation | 3.07e-09 | 239 |
carcinoma | 4.04e-09 | 106 |
cell type cancer | 1.87e-08 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.