FFCP PHASE1:Hg19::chr8:70571835..70571855,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C637|description=CAGE_peak_at_chr8:70571835..70571855,+|id=chr8:70571835..70571855,+|ontology_enrichment_celltype=CL:0000055!2.21e-15!180;CL:0000057!5.44e-15!75;CL:0002620!4.30e-09!23;CL:0000153!7.11e-08!9;CL:0000447!7.11e-08!9;CL:0000499!1.80e-07!27|ontology_enrichment_celltype_v019=CL:0000197;1.48e-11;6!CL:0000098;1.48e-11;6!CL:0002167;1.48e-11;6!CL:0000327;9.12e-10;15!CL:0002334;2.27e-08;12!CL:0000153;6.54e-08;9!CL:0000447;6.54e-08;9!CL:0000151;1.24e-07;36!CL:0000138;2.98e-07;6|ontology_enrichment_celltype_v019_2=CL:0000197,8.70e-12,6;CL:0000098,8.70e-12,6;CL:0002167,8.70e-12,6;CL:0000057,1.40e-11,76;CL:0000327,7.17e-10,15;CL:0002334,3.02e-08,12;CL:0000151,3.66e-08,36;CL:0000153,4.70e-08,9;CL:0000447,4.70e-08,9;CL:0000058,2.78e-07,6;CL:0000138,2.78e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3350;8.71e-10;2|ontology_enrichment_disease_v019_2=DOID:3350,8.75e-10,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0005406;5.10e-09;2!UBERON:0004457;9.52e-08;9!UBERON:0000042;9.52e-08;9!UBERON:0003688;4.61e-07;6!UBERON:0002358;4.61e-07;6!UBERON:0003684;4.61e-07;6!UBERON:0001178;4.61e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0005406,3.25e-09,2;UBERON:0003688,5.28e-07,6;UBERON:0002358,5.28e-07,6;UBERON:0003684,5.28e-07,6;UBERON:0001178,5.28e-07,6|phase1_expression=0.908391896352783,0.214100523890983,0.563817616383885,4.00293193412522,0,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,3.97583067623023,4.01070328508712,2.462390822334,0.795285947051099,0.486634870302636,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,1.13967460498122,0.264818361626438,2.29469296599051,0.354668382198357,0.560677600142307,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.453728732640084,0.538168907066586,0.427114777637135,0,0.600182192168805,0.721367704669072,1.8034837803194,1.67505170698431,1.18143432568886,1.55899208257918,0.504867548488229,0.184099797284599,2.10139873864455,1.77504796258307,0.403008392910561,0.847802961552438,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42198887333556,0,0,2.12750493267896,2.08014873822732,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,1.42636905040718,1.01346914667305,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,5.8231841228626,2.67643483195743,1.89242898040722,1.52283839490527,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,1.24053903909388,1.2276957863045,0.561320188866147,0.768834895534206,3.07024349440022,1.28683136914886,1.48418066444991,0,0,0,0,0,0,0,0,0.803701137152247,0.546273504020151,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0,2.32422774648643,0.62962469366128,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,1.94970791705028,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0.66343897524122,0.876901770507525,0,0,0.202910376962704,0,0,0.143411352204052,0.392996164052485,0,0,0.633322905892992,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0.494255755786011,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,2.40780445460263,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.0671834724867263,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0,0,0,0.851940108927109,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0.318593534327405,0,0.155262956876259,0,0.53168342911599,1.5652351854352,1.20206087197775,1.52322084867518,0,0,0.3222316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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C637 | |||
|description=CAGE_peak_at_chr8:70571835..70571855,+ | |||
|id=chr8:70571835..70571855,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.21e-15!180;CL:0000057!5.44e-15!75;CL:0002620!4.30e-09!23;CL:0000153!7.11e-08!9;CL:0000447!7.11e-08!9;CL:0000499!1.80e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000197;1.48e-11;6!CL:0000098;1.48e-11;6!CL:0002167;1.48e-11;6!CL:0000327;9.12e-10;15!CL:0002334;2.27e-08;12!CL:0000153;6.54e-08;9!CL:0000447;6.54e-08;9!CL:0000151;1.24e-07;36!CL:0000138;2.98e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,8.70e-12,6;CL:0000098,8.70e-12,6;CL:0002167,8.70e-12,6;CL:0000057,1.40e-11,76;CL:0000327,7.17e-10,15;CL:0002334,3.02e-08,12;CL:0000151,3.66e-08,36;CL:0000153,4.70e-08,9;CL:0000447,4.70e-08,9;CL:0000058,2.78e-07,6;CL:0000138,2.78e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3350;8.71e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,8.75e-10,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;5.10e-09;2!UBERON:0004457;9.52e-08;9!UBERON:0000042;9.52e-08;9!UBERON:0003688;4.61e-07;6!UBERON:0002358;4.61e-07;6!UBERON:0003684;4.61e-07;6!UBERON:0001178;4.61e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,3.25e-09,2;UBERON:0003688,5.28e-07,6;UBERON:0002358,5.28e-07,6;UBERON:0003684,5.28e-07,6;UBERON:0001178,5.28e-07,6 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.563817616383885,4.00293193412522,0,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,3.97583067623023,4.01070328508712,2.462390822334,0.795285947051099,0.486634870302636,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,1.13967460498122,0.264818361626438,2.29469296599051,0.354668382198357,0.560677600142307,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.453728732640084,0.538168907066586,0.427114777637135,0,0.600182192168805,0.721367704669072,1.8034837803194,1.67505170698431,1.18143432568886,1.55899208257918,0.504867548488229,0.184099797284599,2.10139873864455,1.77504796258307,0.403008392910561,0.847802961552438,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42198887333556,0,0,2.12750493267896,2.08014873822732,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,1.42636905040718,1.01346914667305,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,5.8231841228626,2.67643483195743,1.89242898040722,1.52283839490527,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,1.24053903909388,1.2276957863045,0.561320188866147,0.768834895534206,3.07024349440022,1.28683136914886,1.48418066444991,0,0,0,0,0,0,0,0,0.803701137152247,0.546273504020151,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0,2.32422774648643,0.62962469366128,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,1.94970791705028,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0.66343897524122,0.876901770507525,0,0,0.202910376962704,0,0,0.143411352204052,0.392996164052485,0,0,0.633322905892992,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0.494255755786011,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,2.40780445460263,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.0671834724867263,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0,0,0,0.851940108927109,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0.318593534327405,0,0.155262956876259,0,0.53168342911599,1.5652351854352,1.20206087197775,1.52322084867518,0,0,0.322231671127465,0,1.59238355479446,0,1.03018711554838,0.336749488765919,0,0,2.35885750512418,0,1.13352962756136,1.62065732026684,0,0.895444205407437,0,1.09642024789354,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,5.33934933654034,0,0,0.0752103283492573,0,0,0,1.47394725759087,0,0,0,0,0,0,0,0.992422356778588,0,0.127762427639595,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0.414432328326074,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24817786719542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,2.77305377178851,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr8:70571835..70571855,+ | |||
}} |
Revision as of 05:56, 14 September 2013
Short description: | p@chr8:70571835..70571855, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:70571835..70571855, + |
Coexpression cluster: | C637_osteoclastoma_Fibroblast_Preadipocyte_Chondrocyte_spindle_hepatic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 8.70e-12 | 6 |
sensory epithelial cell | 8.70e-12 | 6 |
olfactory epithelial cell | 8.70e-12 | 6 |
fibroblast | 1.40e-11 | 76 |
extracellular matrix secreting cell | 7.17e-10 | 15 |
preadipocyte | 3.02e-08 | 12 |
secretory cell | 3.66e-08 | 36 |
GAG secreting cell | 4.70e-08 | 9 |
carbohydrate secreting cell | 4.70e-08 | 9 |
chondroblast | 2.78e-07 | 6 |
chondrocyte | 2.78e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 3.25e-09 | 2 |
omentum | 5.28e-07 | 6 |
peritoneum | 5.28e-07 | 6 |
abdominal cavity | 5.28e-07 | 6 |
visceral peritoneum | 5.28e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 8.75e-10 | 2 |
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