FFCP PHASE1:Hg19::chr10:71812337..71812348,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55506 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14453 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P0M6 | |||
|association_with_transcript=-8bp_to_NM_018649,uc001jqm.2,uc001jqn.2_5end | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_4_at_H2AFY2_5end | |||
|id=chr10:71812337..71812348,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.42e-11;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!4.63e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:171;4.50e-45;10!DOID:3095;4.13e-21;22!DOID:2994;4.13e-21;22!DOID:169;1.50e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.18e-45,10;DOID:3095,3.99e-21,22;DOID:2994,3.99e-21,22;DOID:169,1.44e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001869!9.02e-23!32;UBERON:0002020!9.04e-23!34;UBERON:0003528!9.04e-23!34;UBERON:0001893!4.38e-21!34;UBERON:0002346!5.84e-21!90;UBERON:0000956!2.61e-20!25;UBERON:0000203!2.61e-20!25;UBERON:0002791!1.27e-19!33;UBERON:0001049!1.82e-19!57;UBERON:0005068!1.82e-19!57;UBERON:0006241!1.82e-19!57;UBERON:0007135!1.82e-19!57;UBERON:0000073!5.56e-19!94;UBERON:0001016!5.56e-19!94;UBERON:0002619!1.38e-18!22;UBERON:0002616!1.56e-18!59;UBERON:0001950!2.22e-18!20;UBERON:0002780!3.11e-18!41;UBERON:0001890!3.11e-18!41;UBERON:0006240!3.11e-18!41;UBERON:0003056!5.21e-18!61;UBERON:0003075!6.49e-18!86;UBERON:0007284!6.49e-18!86;UBERON:0003080!1.19e-17!42;UBERON:0000924!1.07e-16!173;UBERON:0006601!1.07e-16!173;UBERON:0005743!2.05e-16!86;UBERON:0000955!1.34e-15!69;UBERON:0006238!1.34e-15!69;UBERON:0001017!3.34e-15!82;UBERON:0004121!2.00e-14!169;UBERON:0000033!7.99e-13!123;UBERON:0000153!1.26e-12!129;UBERON:0007811!1.26e-12!129;UBERON:0000025!4.21e-11!194;UBERON:0007023!6.26e-11!115;UBERON:0000475!7.48e-10!365;UBERON:0004111!7.88e-10!241;UBERON:0000477!1.26e-09!286;UBERON:0000483!2.63e-09!309;UBERON:0000119!4.56e-09!312;UBERON:0000481!5.28e-09!347;UBERON:0000064!7.12e-09!219;UBERON:0000200!9.61e-09!6;UBERON:0001871!9.67e-09!7;UBERON:0000922!1.84e-07!612;UBERON:0000013!3.29e-07!5;UBERON:0002410!3.29e-07!5;UBERON:0002771!5.37e-07!3;UBERON:0000923!6.40e-07!604;UBERON:0005291!6.40e-07!604;UBERON:0006598!6.40e-07!604;UBERON:0002532!6.40e-07!604;UBERON:0002050!7.17e-07!605;UBERON:0005423!7.17e-07!605;UBERON:0001872!9.06e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.11e-50;4!UBERON:0000923;3.11e-50;4!UBERON:0010316;3.11e-50;4!UBERON:0005291;3.11e-50;4!UBERON:0002050;1.81e-40;5!UBERON:0005423;1.81e-40;5!UBERON:0000013;3.42e-11;5!UBERON:0002410;3.42e-11;5!UBERON:0000922;1.14e-07;49!UBERON:0000010;8.61e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,3.26e-11,5;UBERON:0002410,3.26e-11,5;UBERON:0000010,8.37e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0.16480387422676,0.422250816255987,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.552896299656123,0.295547618953547,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.751617097072463,0.311064574191741,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.189932387867636,0.195551382734803,0,0,0,0.288180834308212,0.229073192331831,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.26961417541674,0,0,0,0.136203406111576,0.160753148465019,0,0.415440338029185,0.2249738915515,0,0.546746009922222,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0.13223260174269,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,0,0.124192805882767,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.691292180758654,0,0,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.754773679776773,1.41539347670307,0.218419276384028,0.678930119816101,2.55089904122019,4.58562327758308,0.558644917973244,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0.615349092722265,0,0.276629009856872,0.161475645631851,0,0,0.235939446695481,0,0,0,0.690359926060101,0,0,0,0,0,0,0.147856086217045,0.337687923091973,0,0.206686796501184,0.253663240775627,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.394636641377094,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45178432815584,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0.506794004045748,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@H2AFY2 | |||
}} |
Revision as of 03:17, 11 January 2014
Short description: | p4@H2AFY2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_H2AFY2_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | -8bp_to_NM_018649, uc001jqm.2, uc001jqn.2_5end |
EntrezGene: | H2AFY2 |
HGNC: | 14453 |
UniProt: | Q9P0M6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 3.26e-11 | 5 |
autonomic nervous system | 3.26e-11 | 5 |
peripheral nervous system | 8.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.18e-45 | 10 |
germ cell and embryonal cancer | 3.99e-21 | 22 |
germ cell cancer | 3.99e-21 | 22 |
neuroendocrine tumor | 1.44e-09 | 6 |