FFCP PHASE1:Hg19::chr12:7014204..7014217,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10233 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19138 | |||
|TSSclassifier=strong | |||
|UniProt=C9JEW3 | |||
|association_with_transcript=12bp_to_ENST00000436789_5end | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_4_at_LRRC23_5end | |||
|id=chr12:7014204..7014217,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.59e-15!140;CL:0000037!1.75e-12!172;CL:0000566!1.75e-12!172;CL:0002032!3.41e-11!165;CL:0000837!3.41e-11!165;CL:0002031!1.57e-10!124;CL:0000988!2.12e-10!182;CL:0002087!7.37e-10!119;CL:0002057!1.05e-08!42;CL:0000766!2.67e-08!76;CL:0000860!1.62e-07!45;CL:0000557!7.50e-07!71;CL:0000763!7.53e-07!112;CL:0000049!7.53e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.66e-14;6!CL:0000791;8.63e-10;18!CL:0000789;8.63e-10;18!CL:0002419;8.63e-10;18!CL:0000623;6.81e-09;3!CL:0000767;2.81e-08;3!CL:0000094;2.00e-07;8!CL:0000898;2.09e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.69e-17,136;CL:0000624,2.22e-14,6;CL:0002031,1.25e-13,120;CL:0000037,9.01e-13,168;CL:0002032,5.79e-12,161;CL:0000837,5.79e-12,161;CL:0000988,1.38e-11,177;CL:0002087,3.08e-10,115;CL:0000791,9.89e-10,18;CL:0000789,9.89e-10,18;CL:0002420,9.89e-10,18;CL:0002419,9.89e-10,18;CL:0000790,9.89e-10,18;CL:0000623,6.67e-09,3;CL:0000825,6.67e-09,3;CL:0000766,1.65e-08,72;CL:0000838,2.32e-08,52;CL:0000767,2.92e-08,3;CL:0000542,3.96e-08,53;CL:0000051,3.96e-08,53;CL:0000094,1.84e-07,8;CL:0000898,2.71e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;8.63e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.12e-07!80;UBERON:0001474!7.45e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.69e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3743854128627,6.52509976765262,4.18003532953405,0,0,0,0.0774672005803016,0.284338464974843,3.81680571135301,3.87796785972314,2.80762226458198,11.9355978893719,0,0,0,0.145398238779565,1.13362783106643,1.4555043671269,0,0.411167888021826,0.929119112685311,0.28769239232215,0,0.47296445977717,1.37898272294647,1.29096936716765,2.70852973188684,0.752969358170419,0.272906150057846,1.57306439111559,0,0.962787081228281,2.55734850319616,0.329851300186716,0.199463657621632,0.852449501065388,0.290209238628584,0,0,0,2.08593167368081,0.868755378820466,0,0.736555271975129,1.58231193720442,0,0,0,0,0.450530678524519,0.32145117339416,0,0,0.365328307529268,0,0,0,0,0,0,0,0,17.6456020423929,7.6340834618222,8.79228424688026,1.32171328579026,1.12101712596307,3.16060901730092,30.8834339078718,11.3973121197258,32.8962398399215,0.167186495390678,2.28145586643513,2.8406868344084,0,0.557052284425868,1.17842362989935,0.664601683750863,3.5204502289452,0.25618263945135,0.910415432919148,0.493313713811028,0.552700035571697,0.289803085735052,4.59688345802387,4.54819407752512,9.40819714244791,0.566546713487831,3.44898444241729,8.59068613706575,13.6630633690532,0.318565414324097,0.651083453856419,0,0,0,0,0,0,23.7895957005184,15.2440911596599,31.8613688542158,2.43806866313962,0,0.12786256184353,0,0.50133791063589,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,1.06502877754984,0,0,0,0,0,0,0.265059536642971,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,11.1957182392017,18.4473540373711,19.8200620479417,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9001067803946,22.8565229351088,41.4548007183587,0,0,0,0.670065061337395,0.637938751653163,0.749007023947182,0,1.65766205374414,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0.206768026122887,2.80428461064202,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,1.14851441245126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.371606350251437,0.721346064882224,0.213425530045242,0.318852545457645,0,0.383010740264733,0,0.324621940274555,0.280797178113459,0,0,0,0,0,0,0.851692475380653,0.343505344755765,0.614481528616916,0.223676107892416,3.17013369252626,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0.296964680832639,0,0,0.140669416410513,0,0.16480387422676,0.211125408127993,1.9924798825107,0,11.840839149151,0.20453736500431,0.123084805461069,0.311039587661807,0.269605053441981,0,0.511572370226872,0,0,1.11136990144637,0,0.0927680981618513,0,2.08342208868187,0.0874599999961957,0,0,0,0.709163045303809,1.72371686620732,0,0.347249989866585,1.77148277162768,2.29133233388275,0,0,0,1.09692698576986,0,0,0.153900517007594,0,0.23056390438806,0.269272933229316,0,0.31900115973192,0,0.533034776018635,0,0,0.332423363800313,0,0,0,0,0,0.210998064528027,0.489698424477443,0.848118428603645,0,0,0.0884575645033392,0.611030144933625,0,0,0,1.21322039365219,0,1.40558667435203,0.547364367646998,1.36965233252463,1.94224303627274,0,0,0.30607276163049,0.505492637027904,0.150323419414493,0,0,0,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0.391969589657511,0.0870592065804026,2.44617335538842,0.51595809741485,0,0,0,0,0.0882561266915003,0,0.137041924646751,0.794858446811959,0.253243183823515,0.195551382734803,0,0.426905989478705,0,0.288180834308212,0,3.77508995296322,0,0.248505071130865,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0.399358000997982,0,0,0,0,8.15471646692177,0.0787831823072236,0,0,0.0984274815147488,1.43944664511834,0,0.681017030557878,0.803765742325096,0.137539436597234,0.415440338029185,7.19916452964801,19.3450488639487,0.0607495566580247,0,0,0,0.633602019116439,0,0.383830394638891,0,0.662091970365432,0,0,0,0,0,0.164185041498678,0,0.679872549120754,0,0,1.93924434542326,0.66116300871345,0,0.704815022316672,1.81538601365081,9.11784969578063,5.79934677486074,0,0,0,0,0,0.2506898940227,0,0,0.942324577501406,0,0.122026264901963,0,0.573409195690071,0.998361463831671,1.05563885000352,0.415045904808692,0,0,0,0,0,1.44921028610825,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0.15543720058278,0,0.159296767163702,0,0.465788870628778,0,0,0,0,0,0,0.363697318405119,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.930053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| |||
|short_description=p4@LRRC23 | |||
}} |
Revision as of 11:48, 11 January 2014
Short description: | p4@LRRC23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRRC23_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 12bp_to_ENST00000436789_5end |
EntrezGene: | LRRC23 |
HGNC: | 19138 |
UniProt: | C9JEW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.69e-17 | 136 |
CD4-positive, alpha-beta T cell | 2.22e-14 | 6 |
hematopoietic lineage restricted progenitor cell | 1.25e-13 | 120 |
hematopoietic stem cell | 9.01e-13 | 168 |
hematopoietic oligopotent progenitor cell | 5.79e-12 | 161 |
hematopoietic multipotent progenitor cell | 5.79e-12 | 161 |
hematopoietic cell | 1.38e-11 | 177 |
nongranular leukocyte | 3.08e-10 | 115 |
mature alpha-beta T cell | 9.89e-10 | 18 |
alpha-beta T cell | 9.89e-10 | 18 |
immature T cell | 9.89e-10 | 18 |
mature T cell | 9.89e-10 | 18 |
immature alpha-beta T cell | 9.89e-10 | 18 |
natural killer cell | 6.67e-09 | 3 |
pro-NK cell | 6.67e-09 | 3 |
myeloid leukocyte | 1.65e-08 | 72 |
lymphoid lineage restricted progenitor cell | 2.32e-08 | 52 |
basophil | 2.92e-08 | 3 |
lymphocyte | 3.96e-08 | 53 |
common lymphoid progenitor | 3.96e-08 | 53 |
granulocyte | 1.84e-07 | 8 |
naive T cell | 2.71e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.69e-07 | 76 |