FFCP PHASE1:Hg19::chr16:28223125..28223145,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19733 | |||
|TSSclassifier=strong | |||
|UniProt=Q96QU8 | |||
|association_with_transcript=44bp_to_ENST00000304658,NM_015171,uc002dpa.1,uc002dpb.1,uc010vcp.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_XPO6_5end | |||
|id=chr16:28223125..28223145,- | |||
|ontology_enrichment_celltype=CL:0000055!3.14e-17!180;CL:0000048!3.01e-15!430;CL:0000723!3.00e-14!436;CL:0000034!6.26e-14!444;CL:0000144!2.09e-13!625;CL:0002371!1.93e-11!591;CL:0000192!1.48e-10!42;CL:0000514!1.48e-10!42;CL:0000680!3.35e-10!57;CL:0000056!3.35e-10!57;CL:0000355!3.35e-10!57;CL:0000057!3.53e-10!75;CL:0000183!6.44e-10!59;CL:0000187!9.78e-10!54;CL:0000359!2.33e-09!32;CL:0000003!6.17e-09!722;CL:0000012!9.32e-09!682;CL:0000219!1.89e-08!390;CL:0002320!2.75e-08!365;CL:0000548!3.02e-08!679;CL:0000004!3.02e-08!679;CL:0000255!3.02e-08!679;CL:0000134!3.90e-08!358;CL:0000393!6.60e-08!60;CL:0000211!6.60e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.53e-11;8!CL:0000081;6.15e-10;11!CL:0002334;1.07e-09;12!CL:0000359;3.14e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.04e-12,427;CL:0000723,1.54e-11,433;CL:0000094,2.67e-11,8;CL:0000034,2.96e-11,441;CL:0000081,6.59e-10,11;CL:0002334,1.50e-09,12;CL:0000359,3.90e-08,32;CL:0000134,7.05e-08,354;CL:0000057,7.53e-08,76;CL:0000192,2.08e-07,43;CL:0000514,2.08e-07,43;CL:0002320,2.58e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.72e-10!83;UBERON:0002329!5.72e-10!83;UBERON:0003077!5.72e-10!83;UBERON:0003059!5.72e-10!83;UBERON:0007282!5.72e-10!83;UBERON:0009618!5.72e-10!83;UBERON:0007285!5.72e-10!83;UBERON:0004290!1.86e-09!70;UBERON:0004535!1.96e-09!110;UBERON:0001134!1.01e-08!61;UBERON:0002036!1.01e-08!61;UBERON:0003082!1.01e-08!61;UBERON:0001009!1.08e-08!113;UBERON:0002384!5.07e-08!375;UBERON:0002385!5.81e-08!63;UBERON:0001015!5.81e-08!63;UBERON:0000383!5.81e-08!63;UBERON:0000178!1.72e-07!15;UBERON:0000179!1.72e-07!15;UBERON:0000463!1.72e-07!15;UBERON:0001637!6.81e-07!42;UBERON:0003509!6.81e-07!42;UBERON:0004572!6.81e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.92e-09;15!UBERON:0000179;8.92e-09;15!UBERON:0000463;8.92e-09;15!UBERON:0002390;7.77e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.70e-09,15;UBERON:0000179,3.70e-09,15;UBERON:0000463,3.70e-09,15;UBERON:0002384,2.53e-07,371 | |||
|phase1_expression=1.09007027562334,0.214100523890983,0.422863212287913,0,0.893922188854576,0,0,0,0.261185628199839,0.982935746006035,0,1.31064823278103,0.791300934685361,0.123766352960047,0.994192127183747,0,0.602694528023977,0.730310090387373,0.975865597581014,0.738726348460727,0.612002073732759,0,0,0.410623275218653,0.376627918784408,1.06978768047132,0.492603536699674,0.472264687882075,1.96682138424452,1.15148819429164,1.23852898652861,0,0.6024118375565,0.369754010166788,0.232401601740905,0.284338464974843,0,0.553995408531877,0.802177789880567,0.868043482863407,0,0,0,0.290796477559129,1.13362783106643,0.485168122375632,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0.47296445977717,0.689491361473237,0,1.35426486594342,0.564727018627814,0,0,0.918251677112708,0,0.639337125799041,0.329851300186716,0,1.27867425159808,0.290209238628584,0,0,0.502497330513487,0,0.65156653411535,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0.300353785683013,0.16072558669708,1.14005097496499,0.39783335439818,0,0,0,0.889509253863555,0,0,0,0.661044872784862,0,0,0.587237189370939,0,1.32171328579026,0.560508562981536,0.526768169550154,0.393419540227666,1.17903228824749,0.616804496998528,0.167186495390678,0,0.946895611469467,0,0.111410456885174,0.294605907474837,0.443067789167242,0.270803863765016,0.25618263945135,0.260118695119756,0.657751618414705,0.552700035571697,0.289803085735052,0.14828656316206,0.267540828089713,0,0.566546713487831,0.766440987203842,0.68725489096526,0,0.95569624297229,1.30216690771284,0,1.35517607169996,1.27986611154418,1.24930726552346,0.947109008176067,1.64225599384209,2.01606743224732,4.81392352410313,2.02754165435919,0,0.670700859703636,0.767175371061182,1.80719576192283,0.50133791063589,0.434539556882471,0.795285947051099,0,0.661743720148475,1.10864698731282,0.43917392846563,0.654895377488563,0,0,1.29818957461873,0.870648686496336,0.531831842075461,0.238490624305342,0,0,0.79504962946682,0.860234595106124,0.347140501607594,0,1.67799774483962,0,0,0,0,0,0.402829317109147,0.760272105718513,0.488124115096339,0.735326160691737,0,0.357198913136319,0.44905874525234,0.563057402416611,0,1.89853131913626,0.732806975721629,14.495845917967,15.511210565933,0.436094052142534,0.496971951695318,0.633152558322899,0.529636723252875,0.286836620748814,0.709336764396714,1.68203280042692,0,1.2333377420858,0.622422070799533,0.134710672069688,1.30769522490767,0.302714855289863,0,1.40592859100278,0.624320153660641,1.1409436430889,1.49448680551801,0.822041490506354,0.809364721840658,0.98315564691574,0.61246251376468,1.22834317311768,0.619954687054593,7.12801714369232,1.23633464639278,0.910161361938026,1.43723628363248,1.17835279767846,0.500474079487857,1.10825646193673,0.877955241761676,2.14541457059314,1.65261864797256,0.340296549480063,0.538168907066586,0.85422955527427,1.48352330811693,0.300091096084402,1.54578793857658,0.257640540045629,0.930584281657949,0.337552664482532,0.974370051611986,0.504867548488229,0.644349290496095,0.323292113637624,0.355009592516614,1.71278566986988,1.52604533079439,0,0,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0.36497735907583,1.56449532329816,0,0,0,1.44375896333917,0.118306800039844,0,0.482022059766964,0.55146986366197,0.871517776369625,0.237270619111097,0.404493924480493,0.98110732562673,0,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0.219500570817251,0,0.100528972411631,0.185176890317059,0.325808305310325,0,0,0,0.70445216541493,0.721832238805369,0.462985512576611,0.570762456703795,0,0,0,0.702012795417713,0.148631162288728,0,0,0,0.716468181622786,0.581267877027924,1.53353071666084,0,0.176096868026452,0.414656231081544,0.144119953416961,0.37872730027914,0.63497894292169,1.14596527667483,2.34434894420094,0,0.514137463516618,0,0.285826432630578,1.12131084345361,1.74384027533312,1.1734125731352,0.387815147273333,0,0.845302752556,0,1.04007436911366,1.02882949704857,4.25547396069835,2.1313774321288,0.857867961948885,0.542621605391443,0.823240336780769,1.62868092146868,0,0.791951872933429,0.301439377059586,0,0.599837947092342,0,0.502257091432126,0,0.718874566474748,0,0,1.30303176000821,0.61642896765115,0.537182889719687,3.13838403181876,3.34952292343276,2.58753089831421,3.33691894327346,0.508189248444927,0,0,0,0,17.2271615507852,14.9580729602012,16.9910360508775,0,0.500170521059677,0.813795071099207,1.03985430765404,2.3195768543631,1.57702415033935,1.99140405487612,2.40756879782175,0,2.0694614258501,0,1.10621501125022,1.56390506042549,0.587403472388222,0.343143423810856,1.03384013061444,0.647142602455851,0.960548020230999,0.606255142892519,1.66435439510497,0,0.992431231275107,1.2276957863045,1.68396056659844,1.02511319404561,2.04682899626681,2.0911009748669,0,2.62156479464514,2.66342587969691,1.31403449622095,1.55776328755086,3.48631135379878,0.241718899183244,0,0.0920809889358963,1.60740227430449,1.45672934405374,1.31124414959424,0,0.385076685522074,0,0,0.422206515571503,0,0.510281115829547,1.29549549661284,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| |||
|short_description=p4@XPO6 | |||
}} |
Revision as of 02:56, 12 January 2014
Short description: | p4@XPO6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_XPO6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 44bp_to_ENST00000304658, NM_015171, uc002dpa.1, uc002dpb.1, uc010vcp.1_5end |
EntrezGene: | XPO6 |
HGNC: | 19733 |
UniProt: | Q96QU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.04e-12 | 427 |
somatic stem cell | 1.54e-11 | 433 |
granulocyte | 2.67e-11 | 8 |
stem cell | 2.96e-11 | 441 |
blood cell | 6.59e-10 | 11 |
preadipocyte | 1.50e-09 | 12 |
vascular associated smooth muscle cell | 3.90e-08 | 32 |
mesenchymal cell | 7.05e-08 | 354 |
fibroblast | 7.53e-08 | 76 |
smooth muscle cell | 2.08e-07 | 43 |
smooth muscle myoblast | 2.08e-07 | 43 |
connective tissue cell | 2.58e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
blood | 3.70e-09 | 15 |
haemolymphatic fluid | 3.70e-09 | 15 |
organism substance | 3.70e-09 | 15 |
connective tissue | 2.53e-07 | 371 |