FFCP PHASE1:Hg19::chr19:36427389..36427477,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79414 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28370 | |||
|TSSclassifier=weak | |||
|UniProt=Q9BTN0 | |||
|association_with_transcript=-278bp_to_AY358127_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_2_at_LRFN3_5end | |||
|id=chr19:36427389..36427477,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.72e-12!180;CL:0002321!9.70e-09!248;CL:0000220!2.73e-08!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.88e-16!365;UBERON:0000481!8.12e-16!347;UBERON:0000119!2.06e-14!312;UBERON:0004111!7.27e-14!241;UBERON:0000483!8.72e-14!309;UBERON:0000477!2.58e-13!286;UBERON:0000025!1.14e-12!194;UBERON:0000468!3.56e-10!659;UBERON:0000922!9.35e-09!612;UBERON:0003914!1.16e-08!118;UBERON:0004872!1.29e-08!84;UBERON:0002049!5.15e-08!79;UBERON:0007798!5.15e-08!79;UBERON:0002100!8.76e-08!216;UBERON:0004121!1.15e-07!169;UBERON:0000924!1.44e-07!173;UBERON:0006601!1.44e-07!173;UBERON:0001981!2.48e-07!60;UBERON:0007500!2.48e-07!60;UBERON:0004537!2.48e-07!60;UBERON:0006965!2.48e-07!60;UBERON:0003104!2.69e-07!238;UBERON:0009142!2.69e-07!238;UBERON:0002050!3.71e-07!605;UBERON:0005423!3.71e-07!605;UBERON:0000064!4.00e-07!219;UBERON:0000923!4.45e-07!604;UBERON:0005291!4.45e-07!604;UBERON:0006598!4.45e-07!604;UBERON:0002532!4.45e-07!604;UBERON:0000467!5.19e-07!625;UBERON:0000480!8.09e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,7.54e-08,309;UBERON:0000483,1.60e-07,306;UBERON:0000025,2.40e-07,192;UBERON:0004111,4.17e-07,240;UBERON:0003914,7.48e-07,117 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.704772020479856,0,2.68176656656373,1.74467704820074,0,0,1.82829939739887,1.47440361900905,0.697801167972428,0.655324116390517,0.791300934685361,0.74259811776028,1.32558950291166,0,1.20538905604795,1.46062018077475,0,1.84681587115182,2.65200898617529,2.19418305034661,0.85870796139317,0.821246550437305,1.00434111675842,0,0,0,0.393364276848904,0,0,1.83884244895785,1.204823675113,0,0.387336002901508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0.616804496998528,0,0,0,0,0.334231370655521,0,0.221533894583621,0,0,0.650296737799391,0.164437904603676,0,0,0.14828656316206,0.267540828089713,1.04535523804977,0.113309342697566,0,0,0.253019692019503,0,0,0,0.602300476311091,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0,7.31420598941885,1.34140171940727,0.767175371061182,0,1.50401373190767,1.44846518960824,2.3858578411533,1.94653948121054,0.283604451492204,1.10864698731282,1.31752178539689,1.0478326039817,1.45718115317017,1.11235332835329,0,0,0.132957960518865,0,0,0,1.98762407366705,0.860234595106124,0.347140501607594,2.82653970962005,1.25849830862972,2.47606237746061,2.50793959844173,0.258416759169329,1.06729878806013,1.00416183829401,0.805658634218294,0.760272105718513,3.66093086322254,1.83831540172934,1.62028389576352,0.982297011124877,0.898117490504679,0.563057402416611,0,2.84779697870439,0.549605231791222,0,0,0.436094052142534,2.98183171017191,1.01304409331664,0,2.0078563452417,1.41867352879343,1.68203280042692,2.1349799145941,0.98667019366864,2.17847724779836,0.67355336034844,1.14423332179421,1.51357427644931,1.15235184896,1.64025002283658,1.5608003841516,0,0.896692083310806,0.939475989150119,0.485618833104395,0.421352420106746,0.408308342509787,1.10550885580591,1.44656093646072,2.37600571456411,1.48360157567134,0.910161361938026,0.718618141816238,0.168336113954066,0.750711119231785,0.554128230968366,0.877955241761676,1.22595118319608,0.600952235626387,0.907457465280168,1.4351170855109,0.427114777637135,0.635795703478686,0.300091096084402,0.824420233907511,0,0.18611685633159,1.0126579934476,0.292311015483596,1.51460264546469,1.01254888506529,1.61646056818812,2.13005755509969,0.201504196455281,0.67824236924195,0,0.272746120590835,0.573609190778008,1.70763188581434,1.59035721985782,2.20768491452085,1.65857688024593,2.27088765788066,2.55484151353081,3.12899064659632,1.92972281457866,0,0.464367928031979,0.721879481669586,0.236613600079688,0.674338760312407,0.723033089650446,0,0.435758888184812,0.474541238222193,0.404493924480493,0.196221465125346,0.38474715694639,2.95262181849859,1.40241773803446,1.6462960453256,0,0,0,1.77236972004421,0,1.59884970106048,0.857839051492628,1.20725313949488,0,0.201057944823262,0.462942225792648,1.3032332212413,3.11980435583874,0,0.34779121492523,0.821860859650752,1.01056513432752,0,0.570762456703795,0.790204397959275,0.858486162094873,0,0,0,0,0.671928512795438,1.13420077793909,0.0895585227028483,0,0.383382679165211,64.0462209264727,25.1818521277826,0,0,0,0.825472625798197,4.20187268114105,4.68869788840188,0,0.514137463516618,1.50171528921959,2.28661146104463,1.00917975910825,2.61576041299968,0.95339771567235,0.904902010304444,10.7296933755565,0,0.797814349754612,1.04007436911366,1.02882949704857,0,0.532844358032199,1.42977993658148,1.62786481617433,2.46972101034231,0,1.42156779497018,0.791951872933429,1.50719688529793,0.871533458600294,0.899756920638513,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,0.144781306667579,0.410952645100767,0.716243852959582,0.112085143993527,0.197030760201927,0.215627574859517,0.256686072559497,0.508189248444927,3.90419561572865,0,1.50764638800914,0,0,0,0,2.33113834266366,1.50051156317903,1.62759014219841,2.07970861530807,0.178428988797162,0.946214490203608,1.05427273493442,3.61135319673263,2.27407504055985,1.03473071292505,1.32845119707087,2.02806085395873,1.12948698808508,2.15381273209015,3.77457766191941,0.413536052245775,0.215714200818617,0.320182673410333,1.21251028578504,0,3.32629322662648,0.496215615637554,0.153461973288062,1.12264037773229,1.02511319404561,1.02341449813341,0.160853921143607,0,1.3878872442239,1.24293207719189,0.410635780069046,2.07701771673448,1.04589340613963,1.69203229428271,1.60405176242628,1.01289087829486,0.574072240823034,0.910455840033585,0.917870904715969,1.80479845162965,0.0770153371044148,2.35304930753057,0,0.422206515571503,1.13733384070897,1.19065593693561,1.51141141271498,1.54227252690289,0.270946437543853,3.01013864312912,0,1.66215201785745,0.671624264166535,0,0,0,0.984043937099117,0,0.309123034943167,1.00726411300178,0.990113999047056,1.72279661398852,2.60024098414608,0,0.676695028044854,0.616194468458578,0.460511024178389,0.275673144969061,1.07420244868274,0.580066775656914,1.02271952899321,1.4245125703478,0.330569830721956,0.576570202095319,0.382838137483752,1.11273558941105,0.929691098594572,0.62962469366128,1.3940745403212,1.54016790088044,0.5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| |||
|short_description=p2@LRFN3 | |||
}} |
Revision as of 22:55, 20 January 2014
Short description: | p2@LRFN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRFN3_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -278bp_to_AY358127_5end |
EntrezGene: | LRFN3 |
HGNC: | 28370 |
UniProt: | Q9BTN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell layer | 7.54e-08 | 309 |
epithelium | 1.60e-07 | 306 |
tube | 2.40e-07 | 192 |
anatomical conduit | 4.17e-07 | 240 |
epithelial tube | 7.48e-07 | 117 |