FFCP PHASE1:Hg19::chr1:204042215..204042228,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9580 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11192 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENST00000367203_5end | |||
|description=CAGE_peak_2_at_SOX13_5end | |||
|id=chr1:204042215..204042228,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.60e-33!254;CL:0002321!8.94e-11!248;CL:0000220!4.03e-10!246;CL:0000076!7.71e-09!62;CL:0000223!3.25e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.00e-30,253;CL:0000076,4.02e-09,63;CL:0002321,8.19e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.34e-14!106;DOID:0050687!2.06e-11!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.51e-14,106;DOID:0050687,4.49e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0000466!8.12e-13!126;UBERON:0000468!2.77e-11!659;UBERON:0000464!3.17e-11!104;UBERON:0009569!7.66e-11!113;UBERON:0004119!3.07e-10!169;UBERON:0000925!3.07e-10!169;UBERON:0006595!3.07e-10!169;UBERON:0004921!3.97e-09!129;UBERON:0004185!3.97e-09!129;UBERON:0005177!9.56e-09!107;UBERON:0001007!2.14e-08!155;UBERON:0001555!2.14e-08!155;UBERON:0007026!2.14e-08!155;UBERON:0000077!3.00e-08!130;UBERON:0002100!4.99e-08!216;UBERON:0000475!7.10e-08!365;UBERON:0000467!8.85e-08!625;UBERON:0002553!1.11e-07!70;UBERON:0000480!1.48e-07!626;UBERON:0001041!1.71e-07!98;UBERON:0000064!3.48e-07!219;UBERON:0003886!6.94e-07!63;UBERON:0000922!7.09e-07!612;UBERON:0003104!8.94e-07!238;UBERON:0009142!8.94e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,8.70e-10,112;UBERON:0005177,5.41e-09,101;UBERON:0004119,2.35e-07,160;UBERON:0000925,2.35e-07,160;UBERON:0006595,2.35e-07,160;UBERON:0004921,3.80e-07,118 | |||
|phase1_expression=1.63510541343501,2.5692062866918,2.11431606143957,4.00293193412522,2.23480547213644,0.872338524100369,2.53299878168311,1.89515962028049,1.82829939739887,3.93174298402414,2.79120467188971,4.36882744260345,2.37390280405608,0.247532705920093,0,0.672325146451775,0,0.730310090387373,0.487932798790507,1.96993692922861,1.22400414746552,1.25381888591235,0.572471974262113,2.6006140763848,0.376627918784408,0.152826811495903,0,0.236132343941038,0.393364276848904,3.83829398097213,0.309632246632152,1.83884244895785,3.91567694411725,1.10926203050036,0,0,0,0,0.601633342410425,0.217010870715852,0,0.971680998056939,0.515151135268373,0,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0.619412741790207,0.28769239232215,0,0,0,0.645484683583826,0,0.376484679085209,0.545812300115692,0,0,0.320929027076094,0,0,0.398927315243264,0,0,0,0,0,1.0429658368404,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.393419540227666,0,0,0,0,0,0,0.891283655081389,0,0,0,0.896639238079726,0.260118695119756,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0.637130828648193,0,1.90090408889675,1.05402583354441,1.15187950038977,1.24930726552346,0.236777252044017,0,3.22570789159572,2.13952156626806,0.868946423296794,4.87613732627923,0,0.639312809217652,0.722878304769133,0.50133791063589,0.289693037921647,0,0,0.378139268656271,0,0.43917392846563,2.0956652079634,3.64295288292542,2.22470665670658,0,0,0,0,0,0,2.78267370313387,0,4.16568601929113,1.13061588384802,1.25849830862972,1.6507082516404,2.71693456497854,2.06733407335463,0.35576626268671,1.33888245105868,2.41697590265488,2.28081631715554,3.66093086322254,2.94130464276695,2.43042584364528,2.67899184852239,2.46982309888787,1.91439516821648,1.53316637465883,2.84779697870439,3.11442964681692,0,0,3.48875241714027,0.993943903390637,1.51956613997496,0.529636723252875,1.43418310374407,2.12801029319014,1.12135520028461,0,1.48000529050296,1.8672662123986,1.75123873690594,1.14423332179421,0.756787138224657,2.88087962239999,1.87457145467037,0.936480230490962,1.71141546463335,0.747243402759005,1.17434498643765,1.13311061057692,1.82586048712923,1.02077085627447,0.368502951935304,1.23990937410919,0,0.494533858557114,5.46096817162816,7.90479955997862,2.02003336744879,1.37630371859161,1.6623846929051,0,1.22595118319608,0.751190294532984,0.567160915800105,1.25572744982203,0.85422955527427,0.847727604638247,1.80054657650641,0.515262646192195,2.83404594050192,0.744467425326359,1.18143432568886,0.68205903612839,1.51460264546469,1.10459878370759,0.80823028409406,1.42003837006646,1.0075209822764,1.01736355386293,0.966304265816484,0.818238361772504,1.43402297694502,9.39197537197884,5.4337205011809,6.85544262930159,5.28671380578389,6.81266297364197,5.10968302706162,1.56449532329816,1.28648187638577,1.38134921352481,3.71494342425583,2.16563844500876,1.53798840051797,2.02301628093722,1.20505514941741,1.98529150918309,1.30727666455444,3.32178866755535,2.29213223872279,1.56977172100277,1.53898862778556,3.69077727312324,1.40241773803446,2.8810180793198,1.47008711385542,0,2.94848165003288,2.36315962672562,0,1.59884970106048,0.686271241194102,3.07300799144152,2.24803506515239,0.804231779293047,2.40729957412177,2.28065813717227,1.03993478527958,1.44331342025273,0.927443239800615,0.587043471179108,2.45422961193825,1.38895653772983,1.33177906564219,7.90204397959275,4.29243081047436,0.246217006087397,1.63802985597466,0.743155811443641,0.93733833986777,0.671928512795438,1.41775097242386,1.70161193135412,2.3250715081117,4.98397482914775,4.43396914106349,6.33948724895227,8.9151089682532,8.35895729818376,12.7504857760644,2.6669115602711,4.58386110669933,5.86087236050235,1.71072446022705,1.54241239054985,2.10240140490742,2.5724378936752,0.448524337381443,0.43596006883328,1.466765716419,0.517086863031111,17.8828222925941,2.535908257668,1.59562869950922,5.2003718455683,1.54324424557285,0,1.0656887160644,1.14382394926518,3.25572963234866,0.823240336780769,0.65147236858747,1.77695974371273,0.791951872933429,0,0.871533458600294,1.09970290300263,0,0,0,0.718874566474748,1.14861935834114,0,0.579125226670317,0.821905290201534,0.358121926479791,0,1.97030760201927,1.72502059887614,1.15508732651774,2.54094624222463,0,0,0.502548796003046,0,0,0,0.414415513436035,0.858840442033979,2.00068208423871,0.271265023699736,1.03985430765404,1.24900292158013,1.26161932027148,1.63997980989798,0.300946099727719,0,2.0694614258501,0.664225598535437,0.553107505625109,0.781952530212746,2.93701736194111,0.343143423810856,0.413536052245775,0.431428401637234,1.49418580924822,2.12189300012382,0,2.72151263996712,1.48864684691266,1.07423381301644,2.52594084989766,1.66580894032411,1.02341449813341,1.44768529029247,1.48418066444991,1.07946785661859,0.355123450626254,1.23190734020714,0,1.04589340613963,0.966875596732978,1.00253235151642,2.02578175658972,1.14814448164607,2.1850940160806,1.44236856455367,1.80479845162965,1.61732207919271,3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| |||
|short_description=p2@SOX13 | |||
}} |
Revision as of 23:34, 10 January 2014
Short description: | p2@SOX13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SOX13_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000367203_5end |
EntrezGene: | SOX13 |
HGNC: | 11192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.00e-30 | 253 |
squamous epithelial cell | 4.02e-09 | 63 |
embryonic cell | 8.19e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 8.70e-10 | 112 |
trunk region element | 5.41e-09 | 101 |
endoderm-derived structure | 2.35e-07 | 160 |
endoderm | 2.35e-07 | 160 |
presumptive endoderm | 2.35e-07 | 160 |
subdivision of digestive tract | 3.80e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.51e-14 | 106 |
cell type cancer | 4.49e-11 | 143 |