FFCP PHASE1:Hg19::chr20:61447559..61447570,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1299 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2219 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-25bp_to_ENST00000477612_5end | |||
|description=CAGE_peak_11_at_COL9A3_5end | |||
|id=chr20:61447559..61447570,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.83e-25!7;CL:0000586!2.83e-25!7;CL:0002322!3.78e-25!5;CL:0002586!1.26e-15!3;CL:0000147!2.89e-12!14;CL:0000149!7.66e-12!4;CL:0000047!2.65e-10!8;CL:0000540!3.24e-08!6;CL:0000031!3.24e-08!6;CL:0000404!3.24e-08!6;CL:0002564!3.21e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.65e-36;5!CL:0000039;3.45e-26;7!CL:0000586;3.45e-26;7!CL:0000540;4.53e-14;6!CL:0000404;4.53e-14;6!CL:0002321;1.58e-12;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.67e-36,5;CL:0000039,3.45e-26,7;CL:0000586,3.45e-26,7;CL:0000540,3.97e-14,6;CL:0000031,3.97e-14,6;CL:0000404,3.97e-14,6;CL:0000047,7.67e-11,8 | |||
|ontology_enrichment_development_v019=CL:0000031;4.53e-14;6 | |||
|ontology_enrichment_disease=DOID:3095!9.91e-17!22;DOID:2994!9.91e-17!22;DOID:3493!3.45e-10!2;DOID:0050687!7.38e-08!143;DOID:305!6.18e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.30e-21;1!DOID:10165;2.30e-21;1!DOID:1798;2.30e-21;1!DOID:3095;6.91e-15;22!DOID:2994;6.91e-15;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.82e-21,1;DOID:10165,2.82e-21,1;DOID:1798,2.82e-21,1;DOID:3095,6.43e-15,22;DOID:2994,6.43e-15,22 | |||
|ontology_enrichment_uberon=UBERON:0000966!4.81e-16!5;UBERON:0005388!4.81e-16!5;UBERON:0001802!4.81e-16!5;UBERON:0001781!1.26e-15!3;UBERON:0001782!1.26e-15!3;UBERON:0005424!1.26e-15!3;UBERON:0007625!3.02e-07!11;UBERON:0002242!3.21e-07!3;UBERON:0003068!3.21e-07!3;UBERON:0002328!3.21e-07!3;UBERON:0004880!3.21e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07355300420312,1.85541675650079,1.04574548582567,0.621966330092223,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.984043937099117,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3056390438806,2.60297168788339,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.412079291905832,0.202210631562555,0,0,0,0,1.92903778158023,0.962776056180637,1.66176135211674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09525355585138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0.252332849670158,0.218531143927391,2.66066852124018,0.917899467677836,1.06886962106224,0.643264296743914,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.606351566874658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@COL9A3 | |||
}} | |||
Revision as of 12:41, 21 January 2014
| Short description: | p11@COL9A3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_11_at_COL9A3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -25bp_to_ENST00000477612_5end |
| EntrezGene: | COL9A3 |
| HGNC: | 2219 |
| UniProt: | NA |
| Genome view: | ZENBU |
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CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
