FFCP PHASE1:Hg19::chr2:131669791..131669801,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C564 | |||
|description=CAGE_peak_at_chr2:131669791..131669801,+ | |||
|id=chr2:131669791..131669801,+ | |||
|ontology_enrichment_celltype=CL:0002368!2.13e-38!13;CL:0002076!4.16e-27!43;CL:0002159!3.69e-24!13;CL:0002202!1.51e-20!9;CL:0002632!1.51e-20!9;CL:0000244!1.67e-20!4;CL:0000731!1.67e-20!4;CL:0000223!8.87e-19!59;CL:0002328!1.42e-16!3;CL:0000068!2.64e-16!3;CL:0000069!2.64e-16!3;CL:0000307!2.64e-16!3;CL:0000377!2.64e-16!3;CL:0002621!2.22e-15!3;CL:0000066!8.17e-13!254;CL:0000575!8.61e-12!2;CL:0000317!1.79e-11!2;CL:1000448!1.79e-11!2;CL:0002308!1.79e-11!2;CL:0002140!1.79e-11!2;CL:0002077!4.66e-11!33;CL:0000362!1.98e-10!8;CL:0000622!5.97e-10!5;CL:0000154!2.31e-08!6;CL:0002166!1.25e-07!3;CL:0000220!2.00e-07!246;CL:0002321!2.53e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002368;5.73e-42;13!CL:0000575;1.37e-31;2!CL:0002202;2.26e-27;9!CL:0002632;2.26e-27;9!CL:0000307;1.95e-21;3!CL:0002328;3.63e-21;3!CL:0002159;9.50e-18;14!CL:0002076;1.85e-11;42!CL:0000317;6.42e-09;2!CL:1000448;6.42e-09;2!CL:0002308;6.42e-09;2!CL:0002140;6.42e-09;2!CL:0000362;1.09e-07;9!CL:0002077;4.01e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,6.62e-42,13;CL:0000575,1.60e-31,2;CL:0002202,2.78e-27,9;CL:0002632,2.78e-27,9;CL:0002328,2.96e-21,3;CL:0000068,3.28e-21,3;CL:0000069,3.28e-21,3;CL:0000307,3.28e-21,3;CL:0000377,3.28e-21,3;CL:0002159,9.93e-18,14;CL:0002076,2.29e-17,42;CL:0000223,1.83e-12,58;CL:0000317,5.08e-09,2;CL:1000448,5.08e-09,2;CL:0002308,5.08e-09,2;CL:0002140,5.08e-09,2;CL:0000362,1.09e-07,9;CL:0000066,1.46e-07,253;CL:0002077,1.80e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000377;1.95e-21;3!CL:0000223;2.38e-08;58 | |||
|ontology_enrichment_disease=DOID:3151!7.90e-07!1;DOID:3149!7.90e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;6.47e-17;1!DOID:3149;6.47e-17;1!DOID:3451;4.01e-09;2!DOID:4159;4.01e-09;2!DOID:0060122;4.01e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.53e-17,1;DOID:3149,5.53e-17,1;DOID:3451,3.71e-09,2;DOID:4159,3.71e-09,2;DOID:0060122,3.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0004815!1.42e-16!3;UBERON:0002031!1.42e-16!3;UBERON:0001004!1.66e-16!72;UBERON:0000365!1.93e-16!5;UBERON:0001949!2.22e-15!3;UBERON:0005910!1.00e-13!6;UBERON:0000065!1.60e-13!53;UBERON:0007196!5.40e-13!14;UBERON:0001558!5.40e-13!14;UBERON:0002185!1.48e-12!4;UBERON:0004119!7.98e-12!169;UBERON:0000925!7.98e-12!169;UBERON:0006595!7.98e-12!169;UBERON:0002419!1.79e-11!2;UBERON:0007771!1.79e-11!2;UBERON:0003297!1.79e-11!2;UBERON:0001821!1.79e-11!2;UBERON:0003487!1.79e-11!2;UBERON:0001820!1.79e-11!2;UBERON:0005089!1.79e-11!2;UBERON:0005088!1.79e-11!2;UBERON:0004807!3.19e-10!28;UBERON:0005178!1.36e-08!34;UBERON:0002224!1.36e-08!34;UBERON:0005181!2.60e-08!35;UBERON:0005911!1.13e-07!82;UBERON:0000072!2.11e-07!46;UBERON:0003126!3.04e-07!7;UBERON:0001005!3.04e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.63e-21;3!UBERON:0002031;3.63e-21;3!UBERON:0007196;1.37e-16;15!UBERON:0001558;1.37e-16;15!UBERON:0000964;2.44e-16;4!UBERON:0010409;2.44e-16;4!UBERON:0002185;4.12e-13;5!UBERON:0000065;4.43e-10;44!UBERON:0003126;9.52e-10;7!UBERON:0001005;9.52e-10;7!UBERON:0000485;1.24e-09;7!UBERON:0002419;6.42e-09;2!UBERON:0007771;6.42e-09;2!UBERON:0003297;6.42e-09;2!UBERON:0001821;6.42e-09;2!UBERON:0003487;6.42e-09;2!UBERON:0001820;6.42e-09;2!UBERON:0005178;1.49e-07;34!UBERON:0002224;1.49e-07;34!UBERON:0010313;4.39e-07;10!UBERON:0000072;6.84e-07;37!UBERON:0003102;7.86e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.96e-21,3;UBERON:0002031,2.96e-21,3;UBERON:0007196,1.54e-16,15;UBERON:0001558,1.54e-16,15;UBERON:0000964,2.64e-16,4;UBERON:0010409,2.64e-16,4;UBERON:0004348,2.64e-16,4;UBERON:0005427,2.64e-16,4;UBERON:0002185,3.65e-13,5;UBERON:0000065,5.65e-10,54;UBERON:0003126,1.18e-09,7;UBERON:0001005,1.18e-09,7;UBERON:0002419,5.08e-09,2;UBERON:0007771,5.08e-09,2;UBERON:0003297,5.08e-09,2;UBERON:0001821,5.08e-09,2;UBERON:0003487,5.08e-09,2;UBERON:0001820,5.08e-09,2;UBERON:0005089,5.08e-09,2;UBERON:0005088,5.08e-09,2;UBERON:0005157,3.90e-08,47;UBERON:0000485,1.02e-07,9;UBERON:0005178,1.87e-07,34;UBERON:0002224,1.87e-07,34;UBERON:0005181,3.01e-07,35;UBERON:0001004,3.35e-07,74;UBERON:0010313,4.52e-07,10;UBERON:0002342,4.52e-07,10;UBERON:0005062,4.52e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18577172975525,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.425325291727159,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0,0,1.4875642382488,0.576570202095319,5.23212121227795,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,2.01090682660736,1.08890984861323,0,0.43050537267123,1.68471475667626,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775912131907355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68347750079413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85359238546975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.186224142887574,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p@chr2:131669791..131669801,+ | |||
}} |
Revision as of 05:25, 21 January 2014
Short description: | p@chr2:131669791..131669801, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:131669791..131669801, + |
Coexpression cluster: | C564_Small_salivary_Corneal_Bronchial_Urothelial_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 6.62e-42 | 13 |
corneal epithelial cell | 1.60e-31 | 2 |
epithelial cell of tracheobronchial tree | 2.78e-27 | 9 |
epithelial cell of lower respiratory tract | 2.78e-27 | 9 |
bronchial epithelial cell | 2.96e-21 | 3 |
duct epithelial cell | 3.28e-21 | 3 |
branched duct epithelial cell | 3.28e-21 | 3 |
tracheal epithelial cell | 3.28e-21 | 3 |
tracheoblast | 3.28e-21 | 3 |
general ecto-epithelial cell | 9.93e-18 | 14 |
endo-epithelial cell | 2.29e-17 | 42 |
endodermal cell | 1.83e-12 | 58 |
sebum secreting cell | 5.08e-09 | 2 |
epithelial cell of sweat gland | 5.08e-09 | 2 |
epithelial cell of skin gland | 5.08e-09 | 2 |
acinar cell of sebaceous gland | 5.08e-09 | 2 |
epidermal cell | 1.09e-07 | 9 |
epithelial cell | 1.46e-07 | 253 |
ecto-epithelial cell | 1.80e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.96e-21 | 3 |
epithelium of bronchus | 2.96e-21 | 3 |
tracheobronchial tree | 1.54e-16 | 15 |
lower respiratory tract | 1.54e-16 | 15 |
cornea | 2.64e-16 | 4 |
eye surface | 2.64e-16 | 4 |
optic eminence | 2.64e-16 | 4 |
corneal primordium | 2.64e-16 | 4 |
bronchus | 3.65e-13 | 5 |
respiratory tract | 5.65e-10 | 54 |
trachea | 1.18e-09 | 7 |
respiratory airway | 1.18e-09 | 7 |
skin gland | 5.08e-09 | 2 |
epidermis gland | 5.08e-09 | 2 |
gland of integumental system | 5.08e-09 | 2 |
sebaceous gland | 5.08e-09 | 2 |
skin sebaceous gland | 5.08e-09 | 2 |
sweat gland | 5.08e-09 | 2 |
sweat gland placode | 5.08e-09 | 2 |
sebaceous gland placode | 5.08e-09 | 2 |
epithelial fold | 3.90e-08 | 47 |
simple columnar epithelium | 1.02e-07 | 9 |
thoracic cavity element | 1.87e-07 | 34 |
thoracic cavity | 1.87e-07 | 34 |
thoracic segment organ | 3.01e-07 | 35 |
respiratory system | 3.35e-07 | 74 |
neural crest-derived structure | 4.52e-07 | 10 |
neural crest | 4.52e-07 | 10 |
neural fold | 4.52e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.53e-17 | 1 |
keratoacanthoma | 5.53e-17 | 1 |
skin carcinoma | 3.71e-09 | 2 |
skin cancer | 3.71e-09 | 2 |
integumentary system cancer | 3.71e-09 | 2 |