FFCP PHASE1:Mm9::chr11:70461088..70461109,+: Difference between revisions
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{{FFCP|EntrezGene=70510|HGNC=|MCL_coexpression_id=359|UniProt=A2CFC3,Q91XF4|association_with_transcript=0bp_to_NM_027445,uc007jvs.1,uc007jvt.1,uc007jvu.1_5end|description=CAGE_peak_3_at_Rnf167_5end|id=chr11:70461088..70461109,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.15e-10!130;UBERON:0000925!1.15e-10!130;UBERON:0006595!1.15e-10!130;UBERON:0001007!4.67e-10!128;UBERON:0001555!4.67e-10!128;UBERON:0007026!4.67e-10!128;UBERON:0004921!2.63e-09!126;UBERON:0004185!2.63e-09!126;UBERON:0007023!5.58e-09!51;UBERON:0005409!8.26e-09!59;UBERON:0004923!2.35e-08!24;UBERON:0000160!9.77e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.99e-11,118;UBERON:0000925,1.99e-11,118;UBERON:0006595,1.99e-11,118;UBERON:0001007,8.50e-11,116;UBERON:0001555,8.50e-11,116;UBERON:0007026,8.50e-11,116;UBERON:0005409,1.18e-10,47;UBERON:0000160,3.34e-10,31;UBERON:0004921,5.19e-10,114;UBERON:0007023,5.56e-09,51;UBERON:0004923,2.35e-08,24|phase1_expression=6.56610273129655,26.1731555729521,41.4049307844478,62.9125559518207,60.608383323508,9.06548068324205,9.34450562382103,32.9264474776019,11.9670413828917,9.12851652655775,2.05461561870606,0.957265907944037,61.4610620453029,66.876607850533,7.32841475994458,11.3386149738303,9.09430441566591,14.5112596064789,13.0258711925452,19.0975343309114,9.43980520676875,5.75887516965135,2.87319768052829,30.7185451763341,35.099620003277,28.711598205751,23.26114779259,18.0995835456147,73.1590164907039,46.3735438758273,12.1951780860418,19.6859508772486,31.3683041668131,31.6963362030877,7.51014211353314,7.48055904113216,6.73758875665818,85.7989843010661,49.2241267049994,46.593613213668,130.587390342885,120.216005352686,92.7324774289503,1.88845226963366,2.93993100536592,2.20256102594018,3.12956537739216,2.61630187656536,3.29529274101708,3.30530828426282,2.2397827460058,2.87505128729943,9.06026072711776,29.0144856804538,43.6921938885203,0.771778308107841,1.14613375975503,1.03134418455488,6.27181028664753,8.46385566835253,9.50747105259269,2.71075625655306,6.22506357277798,0.899899717281399,1.97773272513395,0.7104801149461,3.29560121570245,9.98967593836042,4.14758449233911,4.05017814995072,2.10324961351382,4.28476476605705,3.97563373712904,3.42974237801871,5.17565543498476,6.43453150627015,9.91042928994498,9.19348834213351,7.68032666281217,6.98997324970027,8.87430142943374,5.2091337055676,6.97957497503452,10.6924895906019,8.55670187550137,5.30331453852602,3.98640706237488,8.94717339961443,0.908714319998209,0.68014404096107,4.92769630792852,12.0459342777394,4.0798280022465,21.0484244738749,11.695975514058,15.6809410484067,13.2017754923847,0.170430322578058,0.519572009205738,0,9.15482228548423,1.28326477414318,0,0,4.97929394325792,2.78695852022608,3.0331466700887,19.1828917928021,12.6879562987114,6.08612770165782,3.12273588179045,4.26251669636998,6.22661842591358,4.37095657602605,7.4080885495494,4.77533047052767,33.6185156118748,6.50697106139602,7.07688441559899,2.42650274921114,5.96272099843063,8.24287930329878,70.8288692628864,9.66176630138106,7.74952815209784,43.1722423302519,0.599075622529601,0.599902730993408,0.762421362438388,8.83764772488454,8.23501085073528,4.64921102817598,5.9100268865374,7.16003280524926,7.68815764870372,8.92326946872667,3.7680564624617,10.2013715900276,35.6339089391481,32.1976039506305,2.86264974517948,5.28774840196988,2.70093194708024,2.26057226753573,3.06164246180975,3.97152532883034,2.71735001223214,10.0894314588216,4.52692785158969,3.9712276835242,5.27853372491847,3.06874025398605,5.00485048606076,8.00979983000983,8.23128545631774,5.57295947091781,0.702213187313235,0.51469581422943,1.13665399758237,2.07125772535502,2.34526059981096,1.98068267607116,1.89395788468168,2.16440654922144,1.85120535464854,1.16266972375204,1.07309360559848,1.86824547787471,0.822799249567402,1.31333971263276,2.51313309592153,1.75439984910399,1.53685080703735,4.69722465661301,5.04695876553905,2.26390147234426,129.854581712633,29.0895623329899,1.91959425481711,3.25131340604614,4.51036114627327,7.05892336181699,11.1189021922435,25.3000082729704,65.4850104931426,39.3630501790386,39.9622981992429,43.1735544329297,34.3136793329651,61.1197197884871,48.8471992716809,69.3011630925198,3.98302592001472,3.54170389090159,6.76246414038483,5.49858585182348,4.26695471768777,7.01358198903186,8.22074982615345,9.88987991463334,10.5189147653721,16.4118228015995,13.0439155918346,4.67166296005063,5.50365186316968,6.2961391467759,7.30296436998611,7.47649195232492,6.11102044275408,6.90470729881945,13.943629502653,8.78596522201861,2.87536413054709,7.07067800570156,7.80094182786401,11.8712072635143,8.07288360848605,16.4030797263545,8.49864674766381,1.70542270593436,0.325929952884052,1.18821560042632,2.34690248288502,2.84760637651087,4.52282917683426,5.26860849216057,4.57141917907954,5.09368786192182,2.87018583583477,5.57135270033509,6.04397436530635,8.10034728056465,4.52373851817817,2.71952841909355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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70510 | |||
|HGNC= | |||
|MCL_coexpression_id=359 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2CFC3,uniprot:Q91XF4 | |||
|association_with_transcript=0bp_to_NM_027445,uc007jvs.1,uc007jvt.1,uc007jvu.1_5end | |||
|cluster_id=chr11:70461088..70461109,+ | |||
|description=CAGE_peak_3_at_Rnf167_5end | |||
|id=chr11:70461088..70461109,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.15e-10!130;UBERON:0000925!1.15e-10!130;UBERON:0006595!1.15e-10!130;UBERON:0001007!4.67e-10!128;UBERON:0001555!4.67e-10!128;UBERON:0007026!4.67e-10!128;UBERON:0004921!2.63e-09!126;UBERON:0004185!2.63e-09!126;UBERON:0007023!5.58e-09!51;UBERON:0005409!8.26e-09!59;UBERON:0004923!2.35e-08!24;UBERON:0000160!9.77e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.99e-11,118;UBERON:0000925,1.99e-11,118;UBERON:0006595,1.99e-11,118;UBERON:0001007,8.50e-11,116;UBERON:0001555,8.50e-11,116;UBERON:0007026,8.50e-11,116;UBERON:0005409,1.18e-10,47;UBERON:0000160,3.34e-10,31;UBERON:0004921,5.19e-10,114;UBERON:0007023,5.56e-09,51;UBERON:0004923,2.35e-08,24 | |||
|phase1_expression=6.56610273129655,26.1731555729521,41.4049307844478,62.9125559518207,60.608383323508,9.06548068324205,9.34450562382103,32.9264474776019,11.9670413828917,9.12851652655775,2.05461561870606,0.957265907944037,61.4610620453029,66.876607850533,7.32841475994458,11.3386149738303,9.09430441566591,14.5112596064789,13.0258711925452,19.0975343309114,9.43980520676875,5.75887516965135,2.87319768052829,30.7185451763341,35.099620003277,28.711598205751,23.26114779259,18.0995835456147,73.1590164907039,46.3735438758273,12.1951780860418,19.6859508772486,31.3683041668131,31.6963362030877,7.51014211353314,7.48055904113216,6.73758875665818,85.7989843010661,49.2241267049994,46.593613213668,130.587390342885,120.216005352686,92.7324774289503,1.88845226963366,2.93993100536592,2.20256102594018,3.12956537739216,2.61630187656536,3.29529274101708,3.30530828426282,2.2397827460058,2.87505128729943,9.06026072711776,29.0144856804538,43.6921938885203,0.771778308107841,1.14613375975503,1.03134418455488,6.27181028664753,8.46385566835253,9.50747105259269,2.71075625655306,6.22506357277798,0.899899717281399,1.97773272513395,0.7104801149461,3.29560121570245,9.98967593836042,4.14758449233911,4.05017814995072,2.10324961351382,4.28476476605705,3.97563373712904,3.42974237801871,5.17565543498476,6.43453150627015,9.91042928994498,9.19348834213351,7.68032666281217,6.98997324970027,8.87430142943374,5.2091337055676,6.97957497503452,10.6924895906019,8.55670187550137,5.30331453852602,3.98640706237488,8.94717339961443,0.908714319998209,0.68014404096107,4.92769630792852,12.0459342777394,4.0798280022465,21.0484244738749,11.695975514058,15.6809410484067,13.2017754923847,0.170430322578058,0.519572009205738,0,9.15482228548423,1.28326477414318,0,0,4.97929394325792,2.78695852022608,3.0331466700887,19.1828917928021,12.6879562987114,6.08612770165782,3.12273588179045,4.26251669636998,6.22661842591358,4.37095657602605,7.4080885495494,4.77533047052767,33.6185156118748,6.50697106139602,7.07688441559899,2.42650274921114,5.96272099843063,8.24287930329878,70.8288692628864,9.66176630138106,7.74952815209784,43.1722423302519,0.599075622529601,0.599902730993408,0.762421362438388,8.83764772488454,8.23501085073528,4.64921102817598,5.9100268865374,7.16003280524926,7.68815764870372,8.92326946872667,3.7680564624617,10.2013715900276,35.6339089391481,32.1976039506305,2.86264974517948,5.28774840196988,2.70093194708024,2.26057226753573,3.06164246180975,3.97152532883034,2.71735001223214,10.0894314588216,4.52692785158969,3.9712276835242,5.27853372491847,3.06874025398605,5.00485048606076,8.00979983000983,8.23128545631774,5.57295947091781,0.702213187313235,0.51469581422943,1.13665399758237,2.07125772535502,2.34526059981096,1.98068267607116,1.89395788468168,2.16440654922144,1.85120535464854,1.16266972375204,1.07309360559848,1.86824547787471,0.822799249567402,1.31333971263276,2.51313309592153,1.75439984910399,1.53685080703735,4.69722465661301,5.04695876553905,2.26390147234426,129.854581712633,29.0895623329899,1.91959425481711,3.25131340604614,4.51036114627327,7.05892336181699,11.1189021922435,25.3000082729704,65.4850104931426,39.3630501790386,39.9622981992429,43.1735544329297,34.3136793329651,61.1197197884871,48.8471992716809,69.3011630925198,3.98302592001472,3.54170389090159,6.76246414038483,5.49858585182348,4.26695471768777,7.01358198903186,8.22074982615345,9.88987991463334,10.5189147653721,16.4118228015995,13.0439155918346,4.67166296005063,5.50365186316968,6.2961391467759,7.30296436998611,7.47649195232492,6.11102044275408,6.90470729881945,13.943629502653,8.78596522201861,2.87536413054709,7.07067800570156,7.80094182786401,11.8712072635143,8.07288360848605,16.4030797263545,8.49864674766381,1.70542270593436,0.325929952884052,1.18821560042632,2.34690248288502,2.84760637651087,4.52282917683426,5.26860849216057,4.57141917907954,5.09368786192182,2.87018583583477,5.57135270033509,6.04397436530635,8.10034728056465,4.52373851817817,2.71952841909355,15.2446924635901,22.0749397043786,6.90367536947505,6.68106613575558,1.14754461763673,1.51482556322624,1.57754109708128,2.73307121007647,1.93881057959519,0.716906393857656,1.11399337041197,0.283076530788832,1.61924280669958,1.16902343164525,1.97643888973262,3.21321316421807,6.24536374916382,5.87616492101942,4.56083486190013,11.71287873105,2.65490276679926,7.04063844849446,3.32555912661226,5.84675747243284,7.67784921490009,6.45613810682248,16.5394107627662,6.18007340111759,4.63446591900138,4.42451461110142,14.7586052004998,2.06271086496374,11.5749465956288,6.66226047915848,8.40831444587904,7.50179622610573,9.75371285032505,10.7021290561242,9.54384319492302,19.4857567433344,8.68285319835728,67.5744306055586,16.9806866502321,10.2229476823718,13.8859406958479,6.93598636673792,10.9822556482886,12.1464265811345,53.0495122666328,6.11903496634682,12.9861869406368,4.74689796315412,12.4080333337707,13.7508973613424,15.1730592770338,13.7266903923914,2.88963330989554,4.05859211738608,3.73139929271944,14.3200592702267,3.32152793260192,4.06638934253697,4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| |||
|short_description=p3@Rnf167 | |||
}} |
Revision as of 21:26, 3 August 2015
Short description: | p3@Rnf167 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rnf167_5end |
Coexpression cluster: | MCL_coexpression_mm9:359 |
Association with transcript: | 0bp_to_NM_027445, uc007jvs.1, uc007jvt.1, uc007jvu.1_5end |
EntrezGene: | 70510 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.99e-11 | 118 |
endoderm | 1.99e-11 | 118 |
presumptive endoderm | 1.99e-11 | 118 |
digestive system | 8.50e-11 | 116 |
digestive tract | 8.50e-11 | 116 |
primitive gut | 8.50e-11 | 116 |
gastrointestinal system | 1.18e-10 | 47 |
intestine | 3.34e-10 | 31 |
subdivision of digestive tract | 5.19e-10 | 114 |
adult organism | 5.56e-09 | 51 |
organ component layer | 2.35e-08 | 24 |