FFCP PHASE1:Mm9::chr11:82930476..82930501,+: Difference between revisions
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{{FFCP|EntrezGene=20555|HGNC=|MCL_coexpression_id=3|UniProt=Q9Z0I7|association_with_transcript=125bp_to_ENSMUST00000037994_5end|description=CAGE_peak_3_at_Slfn1_5end|id=chr11:82930476..82930501,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,4.47e-09,25;CL:0000791,7.79e-08,9;CL:0000789,7.79e-08,9;CL:0002420,7.79e-08,9;CL:0002419,7.79e-08,9;CL:0000790,7.79e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!1.64e-09!193;UBERON:0004120!1.64e-09!193;UBERON:0006603!1.64e-09!193;UBERON:0002193!7.15e-09!48;UBERON:0002390!7.91e-09!45;UBERON:0003061!7.91e-09!45;UBERON:0002405!1.85e-08!70;UBERON:0000077!2.55e-08!97;UBERON:0003104!4.53e-08!131;UBERON:0009142!4.53e-08!131;UBERON:0004177!1.41e-07!29;UBERON:0001041!1.45e-07!92;UBERON:0001004!8.55e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.82e-10,48;UBERON:0002405,1.82e-10,48;UBERON:0002390,2.94e-10,45;UBERON:0003061,2.94e-10,45;UBERON:0002106,1.44e-08,6;UBERON:0004457,1.44e-08,6;UBERON:0000042,1.44e-08,6;UBERON:0004854,1.44e-08,6;UBERON:0009034,1.44e-08,6;UBERON:0002095,1.44e-08,6;UBERON:0004782,1.44e-08,6;UBERON:0003281,1.44e-08,6;UBERON:0009664,1.44e-08,6;UBERON:0002296,1.44e-08,6;UBERON:0005602,1.44e-08,6;UBERON:0001179,1.44e-08,6;UBERON:0006293,1.44e-08,6|phase1_expression=0,0,0,0,0,0,0,4.9066862907799,2.25261955442667,4.21316147379588,0.856089841127525,0.717949430958028,9.0736386863539,6.8187913886818,2.33176833270964,2.02475267389826,2.79824751251259,3.78554598429885,3.56497527374921,0.42438965179803,0.510259740906419,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,242.32981419667,125.794990468332,176.951025463144,252.351308365305,255.459011374459,170.414133913935,0,0,0,0,0,0,0,0,0,0.335565212115473,2.17608642603403,3.02484419228218,0,0,0,0,0,0,0,0,0.449949858640699,3.9554654502679,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.302904773332736,0,0,0,0.679971333707751,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0.505524445014783,0.91347103775248,7.50919862576798,0.29688427812965,0,0.608930956624282,0,0.60289056221049,0.940709657085638,0.251333182659351,0.494389935468748,1.59059292611903,15.9229899350977,0.970601099684455,2.87093973998512,3.87900202508178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.203678727700633,5.22509276562391,0,0.210441855886474,0,0.229902104433473,0,0,0.204109497453984,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.350296027101508,0.329119699826961,0,0.162137619091711,0.292399974850665,1.09775057645525,0.268412837520744,0,0,0,1.58670339998127,0,0,0,0.403367049246685,0,0.760902504450237,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.350679099451593,0,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0,0.202860121388503,1.20588579876208,2.29163266603278,4.89083433666378,1.13494658742525,1.37280706594041,2.87536413054709,2.60498663367952,0.312037673114561,0.252578877947112,0.358794827043824,0,6.28160846566456,0,0.162964976442026,0,0.469380496577004,0.670025029767263,1.90434912708811,1.36593553500459,1.57635144106191,0.8858587585951,0.478364305972461,1.47476983244164,3.45369963731791,0.433947175744535,10.5553898757491,14.6854534631052,0.491764273019036,2.20749397043786,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.162886959353576,0.824850614862677,0,0,0,0,0.885905678642318,0.614870295887855,0.258428293168221,0.363533729477506,0,0,1.05418608574999,2.06271086496374,0,0,0,0,0.354680467284547,0,0,0.608929898229199,0.469343416127421,0.42366414172764,0,0.65954501176592,1.29171541356724,0.422190474497091,0.358117032009409,0.164140899745061,0,0.18542530201051,4.44264290074417,3.92135049130123,24.4456776128019,1.88368457004691,1.50363650493128,2.0590035588587,0,0.139951452323658,0.138199973804424,0,0,0.406638934253697,0.324016022465404,0.418176592028937,0.87345025498471,0,0.330613822901344,0,0,0.621339313086926,0,0,0,0,0.258319646955462,0.844780627453891,0.821500670520278,0,0,0,0,1.26404448251271,0,0,0.51968329191118,0.716106782669926,0.39736270956253,0.721172697119813,1.18151621739662,0.706765149637033,0.381034033274999,0.907435666231565,1.46186821109629,1.6356013078856,0.701261413089414,0.226730383615211,0.221985953374065,0,0,1.15913756419314,1.68914227906064,1.64836461840539,2.57242054894879,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.419226325255965,0.367687016900028,0,0.412070114477788,0,0,0.50695859978048,0.754505365544305,0.280924522409647,0.384150914429216,0.34461281373368,0,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0.658765662907314,0.169229215783353,0.73171189149109,1.05227884575137,0.135804113845862,0,0.355905054372522,0.29551344712669,0,0.154936841185966,0.771626443924566,0.249810577937946,1.87145286756327,2.14871054048298,0.956441660344217,1.54413993383661,1.15933917810211|short_description=p3@Slfn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20555 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z0I7 | |||
|association_with_transcript=125bp_to_ENSMUST00000037994_5end | |||
|cluster_id=chr11:82930476..82930501,+ | |||
|description=CAGE_peak_3_at_Slfn1_5end | |||
|id=chr11:82930476..82930501,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,4.47e-09,25;CL:0000791,7.79e-08,9;CL:0000789,7.79e-08,9;CL:0002420,7.79e-08,9;CL:0002419,7.79e-08,9;CL:0000790,7.79e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.64e-09!193;UBERON:0004120!1.64e-09!193;UBERON:0006603!1.64e-09!193;UBERON:0002193!7.15e-09!48;UBERON:0002390!7.91e-09!45;UBERON:0003061!7.91e-09!45;UBERON:0002405!1.85e-08!70;UBERON:0000077!2.55e-08!97;UBERON:0003104!4.53e-08!131;UBERON:0009142!4.53e-08!131;UBERON:0004177!1.41e-07!29;UBERON:0001041!1.45e-07!92;UBERON:0001004!8.55e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.82e-10,48;UBERON:0002405,1.82e-10,48;UBERON:0002390,2.94e-10,45;UBERON:0003061,2.94e-10,45;UBERON:0002106,1.44e-08,6;UBERON:0004457,1.44e-08,6;UBERON:0000042,1.44e-08,6;UBERON:0004854,1.44e-08,6;UBERON:0009034,1.44e-08,6;UBERON:0002095,1.44e-08,6;UBERON:0004782,1.44e-08,6;UBERON:0003281,1.44e-08,6;UBERON:0009664,1.44e-08,6;UBERON:0002296,1.44e-08,6;UBERON:0005602,1.44e-08,6;UBERON:0001179,1.44e-08,6;UBERON:0006293,1.44e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,4.9066862907799,2.25261955442667,4.21316147379588,0.856089841127525,0.717949430958028,9.0736386863539,6.8187913886818,2.33176833270964,2.02475267389826,2.79824751251259,3.78554598429885,3.56497527374921,0.42438965179803,0.510259740906419,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,242.32981419667,125.794990468332,176.951025463144,252.351308365305,255.459011374459,170.414133913935,0,0,0,0,0,0,0,0,0,0.335565212115473,2.17608642603403,3.02484419228218,0,0,0,0,0,0,0,0,0.449949858640699,3.9554654502679,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.302904773332736,0,0,0,0.679971333707751,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0.505524445014783,0.91347103775248,7.50919862576798,0.29688427812965,0,0.608930956624282,0,0.60289056221049,0.940709657085638,0.251333182659351,0.494389935468748,1.59059292611903,15.9229899350977,0.970601099684455,2.87093973998512,3.87900202508178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.203678727700633,5.22509276562391,0,0.210441855886474,0,0.229902104433473,0,0,0.204109497453984,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.350296027101508,0.329119699826961,0,0.162137619091711,0.292399974850665,1.09775057645525,0.268412837520744,0,0,0,1.58670339998127,0,0,0,0.403367049246685,0,0.760902504450237,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.350679099451593,0,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0,0.202860121388503,1.20588579876208,2.29163266603278,4.89083433666378,1.13494658742525,1.37280706594041,2.87536413054709,2.60498663367952,0.312037673114561,0.252578877947112,0.358794827043824,0,6.28160846566456,0,0.162964976442026,0,0.469380496577004,0.670025029767263,1.90434912708811,1.36593553500459,1.57635144106191,0.8858587585951,0.478364305972461,1.47476983244164,3.45369963731791,0.433947175744535,10.5553898757491,14.6854534631052,0.491764273019036,2.20749397043786,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.162886959353576,0.824850614862677,0,0,0,0,0.885905678642318,0.614870295887855,0.258428293168221,0.363533729477506,0,0,1.05418608574999,2.06271086496374,0,0,0,0,0.354680467284547,0,0,0.608929898229199,0.469343416127421,0.42366414172764,0,0.65954501176592,1.29171541356724,0.422190474497091,0.358117032009409,0.164140899745061,0,0.18542530201051,4.44264290074417,3.92135049130123,24.4456776128019,1.88368457004691,1.50363650493128,2.0590035588587,0,0.139951452323658,0.138199973804424,0,0,0.406638934253697,0.324016022465404,0.418176592028937,0.87345025498471,0,0.330613822901344,0,0,0.621339313086926,0,0,0,0,0.258319646955462,0.844780627453891,0.821500670520278,0,0,0,0,1.26404448251271,0,0,0.51968329191118,0.716106782669926,0.39736270956253,0.721172697119813,1.18151621739662,0.706765149637033,0.381034033274999,0.907435666231565,1.46186821109629,1.6356013078856,0.701261413089414,0.226730383615211,0.221985953374065,0,0,1.15913756419314,1.68914227906064,1.64836461840539,2.57242054894879,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.419226325255965,0.367687016900028,0,0.412070114477788,0,0,0.50695859978048,0.754505365544305,0.280924522409647,0.384150914429216,0.34461281373368,0,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0.658765662907314,0.169229215783353,0.73171189149109,1.05227884575137,0.135804113845862,0,0.355905054372522,0.29551344712669,0,0.154936841185966,0.771626443924566,0.249810577937946,1.87145286756327,2.14871054048298,0.956441660344217,1.54413993383661,1.15933917810211 | |||
|short_description=p3@Slfn1 | |||
}} |
Revision as of 04:10, 4 August 2015
Short description: | p3@Slfn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slfn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 125bp_to_ENSMUST00000037994_5end |
EntrezGene: | 20555 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 4.47e-09 | 25 |
mature alpha-beta T cell | 7.79e-08 | 9 |
alpha-beta T cell | 7.79e-08 | 9 |
immature T cell | 7.79e-08 | 9 |
mature T cell | 7.79e-08 | 9 |
immature alpha-beta T cell | 7.79e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.82e-10 | 48 |
immune system | 1.82e-10 | 48 |
hematopoietic system | 2.94e-10 | 45 |
blood island | 2.94e-10 | 45 |
spleen | 1.44e-08 | 6 |
cavity lining | 1.44e-08 | 6 |
serous membrane | 1.44e-08 | 6 |
gastrointestinal system mesentery | 1.44e-08 | 6 |
stomach region | 1.44e-08 | 6 |
mesentery | 1.44e-08 | 6 |
gastrointestinal system serosa | 1.44e-08 | 6 |
mesentery of stomach | 1.44e-08 | 6 |
gut mesentery | 1.44e-08 | 6 |
dorsal mesentery | 1.44e-08 | 6 |
dorsal mesogastrium | 1.44e-08 | 6 |
peritoneal cavity | 1.44e-08 | 6 |
spleen primordium | 1.44e-08 | 6 |