FFCP PHASE1:Hg19::chr4:1165755..1165774,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10417 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=311bp_to_ENST00000504909_5end | |||
|coexpression_cluster_id=C574 | |||
|description=CAGE_peak_12_at_SPON2_5end | |||
|id=chr4:1165755..1165774,- | |||
|ontology_enrichment_celltype=CL:0000136!1.56e-11!15;CL:0000048!1.68e-10!430;CL:0000723!5.26e-10!436;CL:0000055!7.99e-10!180;CL:0000057!9.62e-10!75;CL:0000034!2.27e-09!444;CL:0002334!5.52e-09!12;CL:0002552!1.51e-07!5;CL:0002320!4.41e-07!365;CL:0000680!8.34e-07!57;CL:0000056!8.34e-07!57;CL:0000355!8.34e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.36e-17;13!CL:0002622;4.90e-16;3!CL:0002615;1.08e-15;3!CL:0002504;3.26e-15;3!CL:1000279;3.26e-15;3!CL:1000280;3.26e-15;3!CL:1000487;7.00e-11;2!CL:0002617;8.94e-11;2!CL:0002600;3.29e-10;2!CL:0002521;2.83e-07;3!CL:0002579;2.83e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.68e-19,15;CL:0002622,4.02e-16,3;CL:0002615,1.61e-15,3;CL:0002504,1.87e-15,3;CL:1000279,1.87e-15,3;CL:1000280,1.87e-15,3;CL:0002617,6.05e-11,2;CL:1000487,9.41e-11,2;CL:0002600,4.59e-10,2;CL:0000048,1.25e-09,427;CL:0000723,2.19e-09,433;CL:0000034,4.50e-09,441;CL:0000192,1.73e-07,43;CL:0000514,1.73e-07,43;CL:0002579,2.49e-07,3;CL:0002521,2.92e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.07e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!5.07e-09!216;UBERON:0000914!5.30e-09!83;UBERON:0002329!5.30e-09!83;UBERON:0003077!5.30e-09!83;UBERON:0003059!5.30e-09!83;UBERON:0007282!5.30e-09!83;UBERON:0009618!5.30e-09!83;UBERON:0007285!5.30e-09!83;UBERON:0002072!4.35e-08!5;UBERON:0005256!6.03e-08!143;UBERON:0004290!6.22e-08!70;UBERON:0000992!1.15e-07!13;UBERON:0003688!2.02e-07!6;UBERON:0002358!2.02e-07!6;UBERON:0003684!2.02e-07!6;UBERON:0001178!2.02e-07!6;UBERON:0001013!3.43e-07!14;UBERON:0002385!4.79e-07!63;UBERON:0001015!4.79e-07!63;UBERON:0000383!4.79e-07!63;UBERON:0002323!9.97e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.52e-20;6!UBERON:0002358;2.52e-20;6!UBERON:0003684;2.52e-20;6!UBERON:0001178;2.52e-20;6!UBERON:0004457;1.78e-13;9!UBERON:0000042;1.78e-13;9!UBERON:0002367;2.72e-11;11!UBERON:0010147;2.72e-11;11!UBERON:0003937;2.51e-10;12!UBERON:0005399;2.51e-10;12!UBERON:0002190;2.83e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.96e-20,6;UBERON:0002358,2.96e-20,6;UBERON:0003684,2.96e-20,6;UBERON:0001178,2.96e-20,6;UBERON:0002367,2.84e-11,11;UBERON:0010147,2.84e-11,11;UBERON:0009846,2.84e-11,11;UBERON:0003353,2.84e-11,11;UBERON:0004902,2.84e-11,11;UBERON:0003820,2.84e-11,11;UBERON:0009847,2.84e-11,11;UBERON:0003937,2.62e-10,12;UBERON:0005399,2.62e-10,12;UBERON:0004457,5.27e-10,12;UBERON:0000042,5.27e-10,12;UBERON:0000162,8.61e-09,14;UBERON:0001353,8.61e-09,14;UBERON:0000163,8.61e-09,14;UBERON:0006866,8.61e-09,14;UBERON:0000164,8.61e-09,14;UBERON:0000931,8.61e-09,14;UBERON:0004122,3.49e-08,15;UBERON:0002190,2.92e-07,3;UBERON:0004923,5.97e-07,66;UBERON:0002100,7.46e-07,199 | |||
|phase1_expression=4.72363786103447,1.71280419112787,2.11431606143957,3.00219895059391,3.12872766099101,0,2.53299878168311,0.631719873426831,1.30592814099919,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0,0,0,0,0,0.134710672069688,0,0,0,0,3.43376084513353,0,0.298897361103602,0.117434498643765,0.323745888736263,0.280901613404497,0.204154171254893,0.245668634623536,0.206651562351531,9.50402285825643,3.21447008062124,0,1.43723628363248,0,0.125118519871964,0.277064115484183,0,0,0.751190294532984,0,0.179389635688862,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0,0.285826432630578,0.112131084345361,0,0,1.68053230485111,0,0.845302752556,5.85063856486715,3.12022310734098,0,0,0,0.285955987316295,5.96883765930587,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,1.56390506042549,0.195801157462741,0,0,0,0.106727557803444,0,0,0,1.48864684691266,0,0.841980283299221,2.30650468660262,0,1.60853921143608,0,0.308419387605311,0.887808626565635,0.0821271560138091,1.03850885836724,0.348631135379878,0,0,0,3.21480454860899,3.45973219212762,8.52308697236257,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0,0.859361958946189,0.580066775656914,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,2.47819252100972,0.255897791311334,0.855877976067841,0,0,1.61885211824983,3.29444435683266,2.70968525395079,0,0,0,1.46290121726877,0,0,1.09199929126389,16.9686518344455,0,0,0,0,1.15755106853338,1.31178950409327,0,0,0,0.143411352204052,0.0982490410131212,0,0.709522128141196,0,0,0,1.74967360122491,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,2.1983422416447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,1.08599920350743,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0.889811221596536,0.228840068396924,1.05861646634267,0,0,0.318593534327405,1.34940933649081,0,0.414706207840855,0.53168342911599,2.60872530905867,0.300515217994437,0,0,0.727394636810238,0.214821114084977,0.928067519756987,2.3885753321917,0,0.343395705182793,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p12@SPON2 | |||
}} |
Revision as of 23:47, 21 January 2014
Short description: | p12@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SPON2_5end |
Coexpression cluster: | C574_Mesenchymal_Fibroblast_Smooth_Prostate_Adipocyte_Hair_mesenchymal |
Association with transcript: | 311bp_to_ENST00000504909_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.68e-19 | 15 |
prostate stromal cell | 4.02e-16 | 3 |
adipocyte of omentum tissue | 1.61e-15 | 3 |
enteric smooth muscle cell | 1.87e-15 | 3 |
smooth muscle cell of large intestine | 1.87e-15 | 3 |
smooth muscle cell of colon | 1.87e-15 | 3 |
adipocyte of breast | 6.05e-11 | 2 |
smooth muscle cell of prostate | 9.41e-11 | 2 |
smooth muscle cell of trachea | 4.59e-10 | 2 |
multi fate stem cell | 1.25e-09 | 427 |
somatic stem cell | 2.19e-09 | 433 |
stem cell | 4.50e-09 | 441 |
smooth muscle cell | 1.73e-07 | 43 |
smooth muscle myoblast | 1.73e-07 | 43 |
omentum preadipocyte | 2.49e-07 | 3 |
subcutaneous fat cell | 2.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.96e-20 | 6 |
peritoneum | 2.96e-20 | 6 |
abdominal cavity | 2.96e-20 | 6 |
visceral peritoneum | 2.96e-20 | 6 |
prostate gland | 2.84e-11 | 11 |
male accessory sex gland | 2.84e-11 | 11 |
embryonic cloacal epithelium | 2.84e-11 | 11 |
epithelium of hindgut | 2.84e-11 | 11 |
urogenital sinus epithelium | 2.84e-11 | 11 |
prostate bud | 2.84e-11 | 11 |
prostate field | 2.84e-11 | 11 |
sex gland | 2.62e-10 | 12 |
male reproductive gland | 2.62e-10 | 12 |
cavity lining | 5.27e-10 | 12 |
serous membrane | 5.27e-10 | 12 |
cloaca | 8.61e-09 | 14 |
anal region | 8.61e-09 | 14 |
embryonic cloaca | 8.61e-09 | 14 |
terminal part of digestive tract | 8.61e-09 | 14 |
primitive urogenital sinus | 8.61e-09 | 14 |
proctodeum | 8.61e-09 | 14 |
genitourinary system | 3.49e-08 | 15 |
subcutaneous adipose tissue | 2.92e-07 | 3 |
organ component layer | 5.97e-07 | 66 |
trunk | 7.46e-07 | 199 |