FFCP PHASE1:Hg19::chr4:83351863..83351886,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=9987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5037 | |||
|TSSclassifier=strong | |||
|UniProt=O14979 | |||
|association_with_transcript=-485bp_to_NM_001207000,NM_031372,NR_003249,uc003hmq.2,uc003hmr.2,uc003hms.2,uc003hmt.2_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_16_at_HNRPDL_5end | |||
|id=chr4:83351863..83351886,- | |||
|ontology_enrichment_celltype=CL:0000838!1.63e-25!52;CL:0000542!9.98e-25!53;CL:0000051!9.98e-25!53;CL:0000791!2.13e-17!18;CL:0000789!2.13e-17!18;CL:0002420!2.13e-17!18;CL:0002419!2.13e-17!18;CL:0000790!2.13e-17!18;CL:0000084!2.29e-17!25;CL:0000827!2.29e-17!25;CL:0000738!6.74e-17!140;CL:0000037!5.22e-15!172;CL:0000566!5.22e-15!172;CL:0000988!6.64e-13!182;CL:0002087!1.63e-12!119;CL:0002031!6.73e-12!124;CL:0002032!1.44e-11!165;CL:0000837!1.44e-11!165;CL:0000625!8.89e-11!11;CL:0000236!3.17e-08!14;CL:0000624!4.67e-08!6;CL:0000945!1.39e-07!24;CL:0000826!1.39e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.98e-60;18!CL:0000789;9.98e-60;18!CL:0002419;9.98e-60;18!CL:0000084;6.38e-42;25!CL:0000625;1.49e-38;11!CL:0000624;1.49e-26;6!CL:0000542;1.42e-23;53!CL:0000898;1.32e-14;3!CL:0000623;2.96e-13;3!CL:0000815;1.84e-10;2!CL:0000792;1.84e-10;2!CL:0002677;1.84e-10;2!CL:0002087;7.36e-08;104!CL:0000236;8.57e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.32e-59,18;CL:0000789,1.32e-59,18;CL:0002420,1.32e-59,18;CL:0002419,1.32e-59,18;CL:0000790,1.32e-59,18;CL:0000838,1.63e-42,52;CL:0000084,7.79e-42,25;CL:0000827,7.79e-42,25;CL:0000542,1.34e-41,53;CL:0000051,1.34e-41,53;CL:0000625,1.68e-38,11;CL:0000624,1.78e-26,6;CL:0000738,3.17e-21,136;CL:0002087,9.14e-21,115;CL:0002031,1.33e-19,120;CL:0000037,6.78e-16,168;CL:0000988,9.59e-15,177;CL:0000898,1.85e-14,3;CL:0000623,1.52e-13,3;CL:0000825,1.52e-13,3;CL:0002032,4.75e-13,161;CL:0000837,4.75e-13,161;CL:0000815,1.93e-10,2;CL:0000792,1.93e-10,2;CL:0002677,1.93e-10,2;CL:0000236,3.30e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;9.98e-60;18!CL:0000051;1.42e-23;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.46e-14!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.78e-17;15!UBERON:0000179;6.78e-17;15!UBERON:0000463;6.78e-17;15!UBERON:0002390;4.25e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.51e-17,15;UBERON:0000179,7.51e-17,15;UBERON:0000463,7.51e-17,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.393553906568396,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0.309868802321207,0,0.587200878669695,1.10799081706375,0.401088894940283,0.651032612147555,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0.852449501065388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0.285012743741249,0,0.182664153764634,3.51992488922645,1.09227722252426,0.889509253863555,0.426730222566507,1.60158394814405,0.574752439954483,0.661044872784862,0,1.70763890732835,0.587237189370939,1.52909291250092,0,0,0,3.34406609193516,2.75107533924415,2.87842098599313,0.668745981562712,5.21475626613745,6.15482147455153,3.89653456815823,0.334231370655521,5.00830042707223,2.87994062958707,5.68688113906533,0,0.260118695119756,0.164437904603676,0.829050053357545,1.15921234294021,4.74517002118593,7.75868401460168,3.1360657141493,0.679856056185397,3.06576394881537,3.77990190030893,2.78321661221453,4.45991580053735,3.25541726928209,0,2.25862678616659,3.19966527886046,3.74792179657038,3.31488152861624,1.64225599384209,3.62892137804518,3.20928234940209,3.62061009706997,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0.174129737299267,0,0.476981248610684,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0.882926198829301,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,1.86595303986695,0.576479813667846,1.00993946741104,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,1.77327684181734,1.94064817373566,3.7219480521127,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,1.24060815673732,0.862856803274467,2.45473382947922,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,1.52927441428475,0.569647187174163,1.90585420366231,4.11362273086194,2.59389324477087,2.16012574895246,0,0,0,0,0,0,0.213425530045242,0.318852545457645,0,0,0,0.649243880549111,0.561594356226918,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0,0,0.333698283423817,0.19538809540204,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.222617410045812,0.16480387422676,0,0,0.552567831062295,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0.885741385813839,0,0,0.221158519862449,0,0.219385397153973,0.10893846351899,0,0.384751292518985,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0.176915129006678,0,0,0,0,0.269604531922708,0,0,0.729819156862664,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.157363764404994,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.828478110694391,1.48849806543585,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0.18628920882415,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0.233713309847224,0.554805861502613,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0.194860308839388,0.265729680626726,0,0.327609848846413,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0.394308725006267,0,0,0,0.0642292250964595,0,0.319267718114302,0.41023272848151,0,0.207471757392654,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.19024743058172,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.203909198930495,0.131545547125698,0,0,0.313972371402056,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0.205325613712494,0,0,0.467878926924211,0,0.118920090777569,0,0.329821550236287,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.196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| |||
|short_description=p16@HNRPDL | |||
}} |
Revision as of 01:57, 22 January 2014
Short description: | p16@HNRPDL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_HNRPDL_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -485bp_to_NM_001207000, NM_031372, NR_003249, uc003hmq.2, uc003hmr.2, uc003hms.2, uc003hmt.2_5end |
EntrezGene: | HNRPDL |
HGNC: | 5037 |
UniProt: | O14979 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.32e-59 | 18 |
alpha-beta T cell | 1.32e-59 | 18 |
immature T cell | 1.32e-59 | 18 |
mature T cell | 1.32e-59 | 18 |
immature alpha-beta T cell | 1.32e-59 | 18 |
lymphoid lineage restricted progenitor cell | 1.63e-42 | 52 |
T cell | 7.79e-42 | 25 |
pro-T cell | 7.79e-42 | 25 |
lymphocyte | 1.34e-41 | 53 |
common lymphoid progenitor | 1.34e-41 | 53 |
CD8-positive, alpha-beta T cell | 1.68e-38 | 11 |
CD4-positive, alpha-beta T cell | 1.78e-26 | 6 |
leukocyte | 3.17e-21 | 136 |
nongranular leukocyte | 9.14e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 1.33e-19 | 120 |
hematopoietic stem cell | 6.78e-16 | 168 |
hematopoietic cell | 9.59e-15 | 177 |
naive T cell | 1.85e-14 | 3 |
natural killer cell | 1.52e-13 | 3 |
pro-NK cell | 1.52e-13 | 3 |
hematopoietic oligopotent progenitor cell | 4.75e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.75e-13 | 161 |
regulatory T cell | 1.93e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.93e-10 | 2 |
naive regulatory T cell | 1.93e-10 | 2 |
B cell | 3.30e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
blood | 7.51e-17 | 15 |
haemolymphatic fluid | 7.51e-17 | 15 |
organism substance | 7.51e-17 | 15 |