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FFCP PHASE1:Mm9::chr16:90220992..90221016,+: Difference between revisions

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{{FFCP|EntrezGene=20655|HGNC=|MCL_coexpression_id=221|UniProt=P08228|association_with_transcript=5bp_to_ENSMUST00000023707,NM_011434,uc007zvz.1_5end|description=CAGE_peak_1_at_Sod1_5end|id=chr16:90220992..90221016,+|ontology_enrichment_celltype=CL:0000144!8.03e-16!121;CL:0000012!8.03e-16!121;CL:0000548!9.75e-16!115;CL:0000004!9.75e-16!115;CL:0000255!9.75e-16!115;CL:0002371!4.33e-15!118;CL:0000063!7.87e-14!66;CL:0000066!1.11e-12!25;CL:0000223!1.57e-10!20;CL:0002321!4.29e-10!70;CL:0000220!4.29e-10!70;CL:0000034!6.86e-09!97;CL:0000723!6.00e-08!91;CL:0000048!6.00e-08!91;CL:0002076!1.54e-07!15|ontology_enrichment_celltype_v019_2=CL:0000066,1.11e-12,25;CL:0000223,1.57e-10,20;CL:0002321,4.29e-10,70;CL:0000034,6.86e-09,97;CL:0000723,6.00e-08,91;CL:0000048,6.00e-08,91;CL:0002076,1.54e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.01e-09!22;UBERON:0007499!1.01e-09!22;UBERON:0006925!1.01e-09!22;UBERON:0009497!1.01e-09!22;UBERON:0000015!1.01e-09!22;UBERON:0002423!1.01e-09!22;UBERON:0006235!1.01e-09!22;UBERON:0008835!1.01e-09!22;UBERON:0003894!1.01e-09!22;UBERON:0004161!1.01e-09!22;UBERON:0008836!1.01e-09!22;UBERON:0009854!2.10e-09!23;UBERON:0009856!2.10e-09!23;UBERON:0005256!2.56e-09!47;UBERON:0002365!2.83e-08!25;UBERON:0002330!2.83e-08!25;UBERON:0000344!4.19e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.01e-09,22;UBERON:0007499,1.01e-09,22;UBERON:0006925,1.01e-09,22;UBERON:0009497,1.01e-09,22;UBERON:0000015,1.01e-09,22;UBERON:0002423,1.01e-09,22;UBERON:0006235,1.01e-09,22;UBERON:0008835,1.01e-09,22;UBERON:0003894,1.01e-09,22;UBERON:0004161,1.01e-09,22;UBERON:0008836,1.01e-09,22;UBERON:0009854,2.10e-09,23;UBERON:0009856,2.10e-09,23;UBERON:0005256,1.18e-08,45;UBERON:0002365,2.83e-08,25;UBERON:0002330,2.83e-08,25;UBERON:0000344,4.19e-07,15|phase1_expression=86.4803774365887,84.103073241086,110.564815171657,187.527811010235,132.236472705836,65.8086745894608,72.887143865804,38.091380415265,96.0179085074367,68.3468416860221,32.1889780263949,23.1339261086476,30.816131387617,34.531058955504,72.6179280758145,69.6514919821001,110.530776744247,29.0225192129579,29.3424887916281,34.3755617956405,68.3748052814601,68.6100472798117,64.2551481281781,91.3556734150352,114.016412690384,129.776423889995,141.720696736336,104.719019085342,207.315550626904,143.153113703641,86.4748991555688,48.262331182932,49.2051830067656,95.0890086092632,91.2771118414028,109.049927355171,93.3053958119027,23.8563029520037,74.226857729761,32.4584721263755,19.4116391050235,16.3930916390027,9.71020706062307,44.5674735633544,45.112734392684,18.7217687204915,47.7258720052304,113.373081317832,48.5506463843183,130.462462278844,101.630142100013,81.9389616880338,35.2343472721246,56.5782470768849,50.0779760722271,77.43509024682,74.212160944138,85.6015673180554,42.4864567805155,34.3844136526821,65.2846345611365,52.5209024707155,83.5937108344471,61.6431306337758,57.3542490288845,46.8916875864426,64.7136238719754,76.0752244536678,40.6463280249232,69.6630641791524,48.3747411108179,111.403883917483,95.415209691097,33.3174973864675,53.3859273571577,56.0723459832113,117.823992669346,96.6593149304871,98.1545747507396,33.7628896589296,57.2712648951084,35.4221091978597,153.55064945076,150.82037948849,113.834694593724,73.9517749538906,85.1382651178636,59.4614232182709,30.2904773332736,21.7646093107542,93.3363653619403,386.330320764643,545.337009633616,673.009879972358,357.377029596218,316.306982290719,128.787533260816,49.5952238702148,145.999734586812,83.03480000993,97.8861767447929,69.2962978037316,137.594829441589,241.762679072133,194.841936910093,170.257829599266,186.03299576544,207.243741690094,15.5362730188303,64.2754462150691,85.1812954421727,92.5575054068909,104.930051251507,122.537506769282,60.4405954677523,88.5949468874212,75.6416601267184,57.5505440541248,30.9613693182456,22.8091258425847,26.7218237337076,21.819386391085,44.7340226923493,20.2018749937968,17.3840766655168,53.3905245385956,147.252788017776,166.772959216167,110.29695709942,35.7999628177526,45.292559679044,28.6491922817331,34.7648640384553,26.338692105024,67.1155383927379,36.3420429271777,30.3481304273943,33.2166611528948,114.230686812021,91.5422073106162,37.0843262443706,33.7956093517205,29.7102514178826,29.5381442958002,13.9474823260222,20.8825364064305,24.0813432118503,31.5618112301599,40.0956466855087,27.6094877045016,17.243210168067,32.6601641317086,20.5754964426942,22.6363908239408,16.6683530490434,43.7875387000685,94.0965670999735,99.0789442391653,93.48979130115,42.8750349148489,43.6218471564839,53.1183081309994,37.8791576936336,39.5496105812282,43.0405244955785,41.623576110323,47.216118646333,31.1763464120343,42.9501208274184,49.9069090800449,41.6693681065698,79.8251931342314,60.3762817050389,42.8118475845586,34.4875515645169,22.0215870491669,107.386104469734,54.4768167326901,34.5526965867079,33.6743174197636,34.4076121729989,27.8323263980213,27.5748774367639,33.4797101958104,92.0586379396352,110.842396529259,65.598489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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20655
|HGNC=
|MCL_coexpression_id=221
|TSSclassifier=NA
|UniProt=uniprot:P08228
|association_with_transcript=5bp_to_ENSMUST00000023707,NM_011434,uc007zvz.1_5end
|cluster_id=chr16:90220992..90221016,+
|description=CAGE_peak_1_at_Sod1_5end
|id=chr16:90220992..90221016,+
|ontology_enrichment_celltype=CL:0000144!8.03e-16!121;CL:0000012!8.03e-16!121;CL:0000548!9.75e-16!115;CL:0000004!9.75e-16!115;CL:0000255!9.75e-16!115;CL:0002371!4.33e-15!118;CL:0000063!7.87e-14!66;CL:0000066!1.11e-12!25;CL:0000223!1.57e-10!20;CL:0002321!4.29e-10!70;CL:0000220!4.29e-10!70;CL:0000034!6.86e-09!97;CL:0000723!6.00e-08!91;CL:0000048!6.00e-08!91;CL:0002076!1.54e-07!15
|ontology_enrichment_celltype_v019_2=CL:0000066,1.11e-12,25;CL:0000223,1.57e-10,20;CL:0002321,4.29e-10,70;CL:0000034,6.86e-09,97;CL:0000723,6.00e-08,91;CL:0000048,6.00e-08,91;CL:0002076,1.54e-07,15
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.01e-09,22;UBERON:0007499,1.01e-09,22;UBERON:0006925,1.01e-09,22;UBERON:0009497,1.01e-09,22;UBERON:0000015,1.01e-09,22;UBERON:0002423,1.01e-09,22;UBERON:0006235,1.01e-09,22;UBERON:0008835,1.01e-09,22;UBERON:0003894,1.01e-09,22;UBERON:0004161,1.01e-09,22;UBERON:0008836,1.01e-09,22;UBERON:0009854,2.10e-09,23;UBERON:0009856,2.10e-09,23;UBERON:0005256,1.18e-08,45;UBERON:0002365,2.83e-08,25;UBERON:0002330,2.83e-08,25;UBERON:0000344,4.19e-07,15
|phase1_expression=86.4803774365887,84.103073241086,110.564815171657,187.527811010235,132.236472705836,65.8086745894608,72.887143865804,38.091380415265,96.0179085074367,68.3468416860221,32.1889780263949,23.1339261086476,30.816131387617,34.531058955504,72.6179280758145,69.6514919821001,110.530776744247,29.0225192129579,29.3424887916281,34.3755617956405,68.3748052814601,68.6100472798117,64.2551481281781,91.3556734150352,114.016412690384,129.776423889995,141.720696736336,104.719019085342,207.315550626904,143.153113703641,86.4748991555688,48.262331182932,49.2051830067656,95.0890086092632,91.2771118414028,109.049927355171,93.3053958119027,23.8563029520037,74.226857729761,32.4584721263755,19.4116391050235,16.3930916390027,9.71020706062307,44.5674735633544,45.112734392684,18.7217687204915,47.7258720052304,113.373081317832,48.5506463843183,130.462462278844,101.630142100013,81.9389616880338,35.2343472721246,56.5782470768849,50.0779760722271,77.43509024682,74.212160944138,85.6015673180554,42.4864567805155,34.3844136526821,65.2846345611365,52.5209024707155,83.5937108344471,61.6431306337758,57.3542490288845,46.8916875864426,64.7136238719754,76.0752244536678,40.6463280249232,69.6630641791524,48.3747411108179,111.403883917483,95.415209691097,33.3174973864675,53.3859273571577,56.0723459832113,117.823992669346,96.6593149304871,98.1545747507396,33.7628896589296,57.2712648951084,35.4221091978597,153.55064945076,150.82037948849,113.834694593724,73.9517749538906,85.1382651178636,59.4614232182709,30.2904773332736,21.7646093107542,93.3363653619403,386.330320764643,545.337009633616,673.009879972358,357.377029596218,316.306982290719,128.787533260816,49.5952238702148,145.999734586812,83.03480000993,97.8861767447929,69.2962978037316,137.594829441589,241.762679072133,194.841936910093,170.257829599266,186.03299576544,207.243741690094,15.5362730188303,64.2754462150691,85.1812954421727,92.5575054068909,104.930051251507,122.537506769282,60.4405954677523,88.5949468874212,75.6416601267184,57.5505440541248,30.9613693182456,22.8091258425847,26.7218237337076,21.819386391085,44.7340226923493,20.2018749937968,17.3840766655168,53.3905245385956,147.252788017776,166.772959216167,110.29695709942,35.7999628177526,45.292559679044,28.6491922817331,34.7648640384553,26.338692105024,67.1155383927379,36.3420429271777,30.3481304273943,33.2166611528948,114.230686812021,91.5422073106162,37.0843262443706,33.7956093517205,29.7102514178826,29.5381442958002,13.9474823260222,20.8825364064305,24.0813432118503,31.5618112301599,40.0956466855087,27.6094877045016,17.243210168067,32.6601641317086,20.5754964426942,22.6363908239408,16.6683530490434,43.7875387000685,94.0965670999735,99.0789442391653,93.48979130115,42.8750349148489,43.6218471564839,53.1183081309994,37.8791576936336,39.5496105812282,43.0405244955785,41.623576110323,47.216118646333,31.1763464120343,42.9501208274184,49.9069090800449,41.6693681065698,79.8251931342314,60.3762817050389,42.8118475845586,34.4875515645169,22.0215870491669,107.386104469734,54.4768167326901,34.5526965867079,33.6743174197636,34.4076121729989,27.8323263980213,27.5748774367639,33.4797101958104,92.0586379396352,110.842396529259,65.5984894968703,50.5349438984523,46.5964168214697,58.4232615625244,80.1872165035116,96.5835175283681,40.9682666058656,33.4748141946505,16.9061603509621,31.9732584717143,29.2868255623115,15.2896087360894,18.5915419145316,37.3453674388393,52.7515725547019,58.6136528628552,295.563269205887,49.0524610805316,49.5328667685272,67.4586337154561,56.5979738673923,63.9119473343905,63.4018370935735,69.0470729881945,83.4996417891432,163.638602260097,646.956929373095,139.552855375689,170.996644866779,144.980275941642,214.379909158685,274.992807177119,49.3291017744834,30.6976087068185,25.7484662778401,37.3439188705414,33.0913250086788,24.2884073290633,32.1358915196119,39.4169968672754,20.1772984455924,31.0050565508285,19.7723913135284,45.2262748615437,44.0346703758034,69.1422500019625,158.330848136236,124.554401594484,46.2258416637894,35.5958402733105,49.1284805362643,44.1888058452606,28.3607455501649,59.583138820232,55.2139383978449,57.0040566673092,31.8826628644542,28.1983181584011,30.0778210011232,34.8184132870264,42.5051236758639,54.0673337135927,32.0183100136684,36.9519513885078,23.7039942297809,62.5010268872066,34.0433745048974,16.9919226661712,33.1862845849907,53.8973012264059,69.8367416588575,64.5029372765172,40.7516612175466,35.9699123094395,36.179961043551,64.3454701175185,50.2661303522457,34.1319698570681,42.1674434299995,38.1601510018291,55.4916557378674,39.9735628749509,58.5994837535878,52.5125735827401,32.8079432238206,54.2241205510295,48.0483140158193,78.8564218206812,30.9766654644098,62.2786288339631,57.1168550962351,28.1955492529931,17.5996225098537,9.71038091343309,13.8471919043638,5.25250879184196,62.6683798754179,41.5352676503542,31.9528547091985,39.2135049130123,30.186707961263,57.0756424724214,36.9074414846768,53.5340925303263,67.8213935675483,64.7975224258537,72.1403863259092,206.208853491265,25.7813834768625,26.0248917922366,39.5299547407793,33.8723039543439,39.7419866018043,40.3244395690614,37.1114016206758,70.412348393704,72.8436149899876,34.1736622197809,58.6240656231558,47.3967450959413,53.4430924176425,37.1401769737131,83.9538852605252,59.3036000472631,40.2535328554936,38.1498847592774,40.7902849816015,39.136627573813,39.7481408635854,11.0603892219862,61.4257402329198,42.6250472234033,40.6652175920498,20.5880700017604,25.0338507024394,28.3661260867126,29.2425263805663,19.8903906397851,17.298945110685,17.3421038435366,20.076323432389,20.2044867444692,17.5315353272353,25.3938029649037,45.9510923484314,97.6086759911096,58.5917311110634,50.6156736364339,26.4632290386167,17.948859178192,16.7207335681671,115.863156032169,22.0253218620656,39.5879703396172,38.3839994004396,63.4138242848207,48.6408589037156,52.877572817279,58.7269575201671,52.6875807772338,52.1113770331835,46.080667745912,56.4603170857921,9.57659696162474,26.9759097091532,28.4434858969904,31.6515875568253,44.3062855364534,30.8922951644245,38.7345907609121,21.5015870426516,28.3020877175453,29.6570780871581,33.1982360839494,41.4831878091579,33.4851547077466,28.8900408846735,39.056082685212,34.7652977834566,41.861300840624,37.9119028739042,46.5148587624696,36.344140752854,35.3176854257082,49.8331636989901,26.8890870769808,36.8908771228096,31.2227903120286,31.8294672798624,27.8853894124113,41.9634711783713,26.3736867679137,27.1674191504359,29.2558312655423,22.0984763311632,29.5929366665195,27.1998321483409,17.2369298777183,23.6270924529862,25.9993975398441,30.0322681348084,32.2063471914493,33.8527040005815
|short_description=p1@Sod1
}}

Revision as of 04:06, 4 August 2015

Short description:p1@Sod1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sod1_5end
Coexpression cluster:MCL_coexpression_mm9:221
Association with transcript: 5bp_to_ENSMUST00000023707, NM_011434, uc007zvz.1_5end
EntrezGene:20655
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sod1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G786.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I584.10
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6110.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I3187.53
CD326+ enterocyte, pool2.CNhs13197.11849-124I4132.24
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I765.81
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I872.89
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E938.09
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E796.02
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F268.35
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E632.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F123.13
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E430.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E834.53
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A172.62
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A369.65
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5110.53
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A229.02
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A429.34
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A634.38
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A368.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H268.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I964.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D191.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2114.02
GP2+ M cell, pool1.CNhs13228.11845-124H9129.78
GP2+ M cell, pool2.CNhs13231.11846-124I1141.72
GP2+ M cell, pool3.CNhs13240.11847-124I2104.72
Ileum epithelium, pool1.CNhs13199.10252-104B9207.32
Ileum epithelium, pool2.CNhs13232.10253-104C1143.15
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C886.47
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I348.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G649.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E995.09
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F591.28
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6109.05
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F793.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H174.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H332.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G919.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H216.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.71
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D844.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D945.11
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B318.72
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B747.73
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2113.37
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B848.55
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3130.46
Mouse Astrocytes, donor2.CNhs12078.11552-120C4101.63
Mouse Astrocytes, donor3.CNhs12107.11633-122C481.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A235.23
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I956.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A150.08
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C177.44
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E174.21
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C585.60
Mouse Granule cells, donor1.CNhs12131.11713-123C342.49
Mouse Granule cells, donor2.CNhs12357.11731-123E334.38
Mouse Granule cells, donor3.CNhs12108.11636-122C765.28
Mouse Meningeal cells, donor1.CNhs12132.11716-123C652.52
Mouse Meningeal cells, donor3.CNhs12109.11639-122D183.59
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C761.64
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E757.35
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D246.89
Mouse Microglia, donor1.CNhs12629.11718-123C864.71
Mouse Microglia, donor2.CNhs12634.11736-123E876.08
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D540.65
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F569.66
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D948.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1111.40
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D595.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D233.32
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F253.39
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D656.07
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3117.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F396.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D798.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D433.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F457.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D835.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4153.55
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5150.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6113.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D673.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F685.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E159.46
Mouse Schwann, donor1.CNhs12507.11728-123D930.29
Mouse Schwann, donor2.CNhs12573.11746-123F921.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G393.34
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7386.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C4545.34
Mouse hepatocyte, donor3.CNhs12615.11637-122C8673.01
Mouse hepatocyte, donor6.CNhs13090.11822-124F4357.38
Mouse hepatocyte, donor8.CNhs13091.11824-124F6316.31
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7128.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I749.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3146.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I883.03
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G697.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H169.30
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8137.59
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6241.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1194.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2170.26
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3186.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6207.24
accessory axillary lymph node, adult.CNhs10475.1063-29H915.54
adrenal gland, adult.CNhs10508.49-24D764.28
adrenal gland, embryo E14.CNhs11038.406-44C585.18
adrenal gland, embryo E16.CNhs11004.1254-43D692.56
adrenal gland, embryo E17.CNhs11043.1263-45I1104.93
adrenal gland, embryo E18.CNhs11026.1262-18F5122.54
adrenal gland, neonate N00.CNhs11191.1311-23C160.44
adrenal gland, neonate N25.CNhs11223.1377-27I388.59
amnion, adult pregnant day17.5.CNhs10488.583-22A875.64
aorta, adult.CNhs10498.46-23H157.55
bone (os femoris), adult.CNhs10483.56-12G230.96
bone (os femoris), neonate N02.CNhs11227.1985-43F522.81
bone (os femoris), neonate N16.CNhs11225.1525-43A626.72
bone (os femoris), neonate N20.CNhs11195.1350-25C321.82
cecum, adult.CNhs10467.37-13H444.73
cerebellum, adult.CNhs10494.15-8B220.20
cerebellum, neonate N30.CNhs11135.1395-42I217.38
colon, adult.CNhs10468.36-18H753.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7147.25
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1166.77
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4110.30
corpora quadrigemina, adult.CNhs10501.16-22A435.80
corpus striatum, adult.CNhs10487.19-21D845.29
corpus striatum, neonate N00.CNhs11226.630-43F128.65
cortex, adult.CNhs10473.12-14D534.76
cortex, neonate N30.CNhs11107.1392-42F226.34
diencephalon, adult.CNhs10482.20-12F267.12
diencephalon, neonate N30.CNhs11201.1388-42B236.34
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.35
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A233.22
epididymis, adult.CNhs10490.58-23B2114.23
eyeball, adult.CNhs10484.31-12G491.54
eyeball, embryo E12.CNhs11016.345-16C637.08
eyeball, embryo E14.CNhs10521.399-16E233.80
eyeball, embryo E15.CNhs10593.426-16C929.71
eyeball, embryo E17.CNhs11023.1261-18D429.54
eyeball, neonate N00.CNhs11207.633-15C613.95
eyeball, neonate N01.CNhs11140.1532-43E720.88
eyeball, neonate N02.CNhs11205.1551-44G824.08
eyeball, neonate N16.CNhs11188.777-19A231.56
forelimb, embryo E11.CNhs10596.335-25E240.10
forelimb, embryo E12.CNhs10600.359-14H227.61
forelimb, embryo E13.CNhs10589.384-1E217.24
forelimb, embryo E14.CNhs10577.413-26A832.66
forelimb, embryo E15.CNhs11007.437-20E720.58
forelimb, embryo E17.CNhs10598.1517-43C422.64
forelimb, embryo E18.CNhs11008.1520-43B516.67
gonad, embryo E13.CNhs11044.1564-45I643.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C894.10
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D299.08
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D593.49
heart, embryo E11.CNhs10586.331-24E942.88
heart, embryo E12.CNhs11015.353-12F543.62
heart, embryo E13.CNhs11013.376-3I953.12
heart, embryo E14.CNhs10597.403-26D437.88
heart, embryo E15.CNhs11017.431-16C839.55
heart, embryo E16.CNhs11021.457-17C643.04
heart, embryo E17.CNhs11025.479-18E541.62
heart, embryo E18.CNhs11030.1283-20G347.22
heart, neonate N00.CNhs11213.639-21E331.18
heart, neonate N03.CNhs11221.1349-25I242.95
heart, neonate N10.CNhs11118.749-24G149.91
heart, neonate N16.CNhs11209.782-15G141.67
heart, neonate N20.CNhs11127.821-26I679.83
heart, neonate N25.CNhs11196.1351-25D360.38
heart, neonate N30.CNhs11202.1390-42D242.81
hippocampus, adult.CNhs10478.13-16E834.49
hippocampus, neonate N00.CNhs11228.627-43G122.02
intestinal mucosa, adult.CNhs10506.860-29I3107.39
intestine, adult.CNhs10496.178-9A354.48
intestine, embryo E12.CNhs11019.1251-16I534.55
intestine, embryo E13.CNhs11010.381-16D533.67
intestine, embryo E15.CNhs10602.976-16D834.41
intestine, embryo E16.CNhs10585.463-22H427.83
intestine, embryo E17.CNhs10582.482-18D327.57
intestine, embryo E18.CNhs10526.1289-20F733.48
intestine, neonate N00.CNhs11126.644-26D192.06
intestine, neonate N01.CNhs11192.1322-23E9110.84
intestine, neonate N06.CNhs11102.688-20B865.60
intestine, neonate N07.CNhs11095.720-20F250.53
intestine, neonate N10.CNhs11098.755-23A546.60
intestine, neonate N20.CNhs11187.827-18D158.42
intestine, neonate N25.CNhs11121.1352-25E380.19
intestine, neonate N30.CNhs11131.1384-42G196.58
kidney, embryo E14.CNhs10606.411-4I940.97
kidney, embryo E15.CNhs10997.434-16F833.47
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I231.97
kidney, embryo E18.CNhs11001.1288-20C729.29
kidney, neonate N00.CNhs11214.646-21G715.29
kidney, neonate N10.CNhs11206.758-6D518.59
kidney, neonate N20.CNhs11113.832-19I137.35
kidney, neonate N25.CNhs11122.1353-25F352.75
kidney, neonate N30.CNhs11203.1385-42H158.61
liver, adult pregnant day01.CNhs10466.508-5B2295.56
liver, embryo E12.CNhs10601.355-15F849.05
liver, embryo E13.CNhs10524.378-3H649.53
liver, embryo E14.CNhs10594.409-16E167.46
liver, embryo E15.CNhs10520.433-16D756.60
liver, embryo E16.CNhs10523.462-17F563.91
liver, embryo E17.CNhs10510.481-18A363.40
liver, embryo E18.CNhs10579.499-43G469.05
liver, neonate N00.CNhs11117.641-24F483.50
liver, neonate N03.CNhs11123.1345-25G2163.64
liver, neonate N06.CNhs11101.684-20A8646.96
liver, neonate N07.CNhs11103.716-20H2139.55
liver, neonate N10.CNhs11115.751-24B9171.00
liver, neonate N20.CNhs11220.823-25A3144.98
liver, neonate N25.CNhs11198.1368-26H1214.38
liver, neonate N30.CNhs11106.1382-42D1274.99
lung, adult.CNhs10474.28-22B149.33
lung, embryo E12.CNhs10522.354-16G230.70
lung, embryo E14.CNhs10604.404-26F825.75
lung, embryo E15.CNhs11020.432-17C537.34
lung, embryo E16.CNhs10998.458-17B633.09
lung, embryo E17.CNhs10605.480-44A624.29
lung, embryo E18.CNhs10583.1287-20I632.14
lung, neonate N00.CNhs11224.640-42C639.42
lung, neonate N06.CNhs11212.683-20E520.18
lung, neonate N07.CNhs11111.715-19A331.01
lung, neonate N10.CNhs11219.750-23E619.77
lung, neonate N20.CNhs11109.822-18A445.23
lung, neonate N25.CNhs11119.1359-25C744.03
lung, neonate N30.CNhs11133.1394-42H269.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1158.33
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1124.55
mammary gland, adult lactating day02.CNhs10480.595-22B646.23
mammary gland, adult pregnant day19.CNhs10476.588-5H235.60
medulla oblongata, adult.CNhs10477.17-12C249.13
medulla oblongata, neonate N30.CNhs11200.1396-42A344.19
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C728.36
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C259.58
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E155.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E257.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E331.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D728.20
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D830.08
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D934.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D442.51
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D554.07
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D632.02
olfactory brain, adult.CNhs10489.18-22I936.95
ovary, adult.CNhs10507.91-2I723.70
ovary, embryo E18.CNhs11040.505-44H762.50
ovary, neonate N00.CNhs11217.1299-22I434.04
oviduct, adult pregnant day01.CNhs10500.988-6G616.99
pancreas, adult.CNhs10486.34-16E433.19
pancreas, embryo E14.CNhs11012.405-44F453.90
pancreas, embryo E15.CNhs11042.1556-45F269.84
pancreas, embryo E16.CNhs11003.460-26E564.50
pancreas, embryo E17.CNhs10599.1558-45G340.75
pancreas, embryo E18.CNhs10580.1535-43I735.97
pancreas, neonate N00.CNhs11105.645-26G936.18
pancreas, neonate N01.CNhs11138.1531-43D764.35
pancreas, neonate N02.CNhs11139.1539-43D850.27
pancreas, neonate N16.CNhs11136.787-43B634.13
pancreas, neonate N25.CNhs11094.1555-45E242.17
pancreas, neonate N30.CNhs11182.1548-44H538.16
pituitary gland, adult.CNhs10493.21-1G855.49
pituitary gland, embryo E12.CNhs11018.346-16E639.97
pituitary gland, embryo E13.CNhs11009.370-44C758.60
pituitary gland, embryo E14.CNhs11037.398-44A552.51
pituitary gland, embryo E15.CNhs10592.427-16B932.81
pituitary gland, embryo E16.CNhs11036.449-43F654.22
pituitary gland, embryo E17.CNhs11039.1265-44F548.05
pituitary gland, neonate N00.CNhs11190.1308-22E978.86
placenta, adult pregnant day10.CNhs10472.539-13I730.98
placenta, adult pregnant day17.CNhs10464.577-18G362.28
prostate, adult.CNhs10470.859-1F857.12
skin, adult.CNhs10492.30-1C328.20
skin, neonate N00.CNhs11124.650-25G417.60
skin, neonate N03.CNhs11215.662-22H39.71
skin, neonate N06.CNhs11097.693-20I513.85
skin, neonate N10.CNhs11108.762-6C45.25
small intestine, neonate N16.CNhs11114.790-21I162.67
spinal cord, adult.CNhs10505.24-13C941.54
spleen, adult.CNhs10465.25-2G231.95
spleen, embryo E16.CNhs11035.461-43C139.21
spleen, embryo E18.CNhs11011.1271-21F230.19
spleen, neonate N10.CNhs11116.752-24D157.08
spleen, neonate N20.CNhs11112.824-19H136.91
spleen, neonate N25.CNhs11099.1354-25G353.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C667.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C964.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D372.14
stomach, adult.CNhs10503.33-1H6206.21
stomach, embryo E12.CNhs10588.356-43E325.78
stomach, embryo E15.CNhs10603.1252-16G826.02
stomach, embryo E16.CNhs11022.459-17D439.53
stomach, embryo E17.CNhs11006.1035-18D533.87
stomach, embryo E18.CNhs10999.1286-20C639.74
stomach, neonate N03.CNhs11193.1340-24B840.32
stomach, neonate N07.CNhs11210.718-18A937.11
stomach, neonate N25.CNhs11104.1355-25E470.41
stomach, neonate N30.CNhs11134.1386-42I172.84
submandibular gland, adult.CNhs10469.59-29C134.17
testis, adult.CNhs10504.57-7G558.62
testis, embryo E13.CNhs11031.389-23F547.40
testis, embryo E15.CNhs11034.443-27C553.44
testis, embryo E16.CNhs11033.470-26G537.14
testis, embryo E17.CNhs11029.486-18I583.95
testis, embryo E18.CNhs11027.503-18G559.30
testis, neonate N00.CNhs11189.1300-22B740.25
testis, neonate N07.CNhs11222.726-26I438.15
testis, neonate N10.CNhs11204.763-44D940.79
testis, neonate N20.CNhs11110.839-18H339.14
testis, neonate N30.CNhs11130.1391-42E239.75
thymus, adult.CNhs10471.38-12B511.06
thymus, embryo E14.CNhs11041.402-44I461.43
thymus, embryo E15.CNhs11005.430-45I242.63
thymus, embryo E16.CNhs11002.456-26C540.67
thymus, embryo E17.CNhs10581.478-18C120.59
thymus, embryo E18.CNhs10595.1273-19G425.03
thymus, neonate N02.CNhs11181.1541-43F828.37
thymus, neonate N03.CNhs11137.2104-43C729.24
thymus, neonate N06.CNhs11197.681-26C419.89
thymus, neonate N07.CNhs11211.713-19D317.30
thymus, neonate N10.CNhs11194.748-24E417.34
thymus, neonate N20.CNhs11186.820-7A220.08
thymus, neonate N25.CNhs11125.1362-25G720.20
thymus, neonate N30.CNhs11132.1393-42G217.53
tongue, adult.CNhs10499.32-1B425.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H345.95
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F797.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G558.59
urinary bladder, adult.CNhs10481.879-12E450.62
uterus, adult pregnant day19.CNhs10497.590-15F526.46
uterus, adult.CNhs10509.92-27E517.95
vagina, adult.CNhs10502.89-27D516.72
vesicular gland, adult.CNhs10491.51-27F8115.86
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A239.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A338.38
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D763.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A448.64
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A552.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A658.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A752.69
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A852.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A946.08
whole body, embryo E11.CNhs11014.324-5I856.46
whole body, embryo E12.CNhs10587.857-27C99.58
whole body, embryo E13.CNhs10512.372-23H226.98
whole body, embryo E14.5.CNhs10578.420-27D228.44
whole body, embryo E14.CNhs10519.395-14B131.65
whole body, embryo E16.CNhs10514.453-14F244.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G530.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G538.73
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.50
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G528.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G529.66
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G533.20
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G541.48
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G533.49
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G528.89
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G539.06
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G534.77
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G541.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G537.91
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G546.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G536.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G535.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G549.83
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G526.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G536.89
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G531.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G531.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G527.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G541.96
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G526.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G527.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G529.26
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G529.59
whole body, embryo E17.5.CNhs10513.490-9F927.20
whole body, embryo E17.CNhs10517.475-3I517.24
whole body, embryo E18.CNhs10516.493-3B323.63
whole body, neonate N00.CNhs10525.657-19C226.00
whole body, neonate N01.CNhs10576.659-23C630.03
whole body, neonate N06.CNhs10515.692-21D132.21
whole body, neonate N10.CNhs10518.761-6B433.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.11e-1225
endodermal cell1.57e-1020
embryonic cell4.29e-1070
stem cell6.86e-0997
somatic stem cell6.00e-0891
multi fate stem cell6.00e-0891
endo-epithelial cell1.54e-0715

Uber anatomy
Ontology termp-valuen
liver1.01e-0922
epithelial sac1.01e-0922
digestive gland1.01e-0922
epithelium of foregut-midgut junction1.01e-0922
anatomical boundary1.01e-0922
hepatobiliary system1.01e-0922
foregut-midgut junction1.01e-0922
hepatic diverticulum1.01e-0922
liver primordium1.01e-0922
septum transversum1.01e-0922
liver bud1.01e-0922
digestive tract diverticulum2.10e-0923
sac2.10e-0923
trunk mesenchyme1.18e-0845
exocrine gland2.83e-0825
exocrine system2.83e-0825
mucosa4.19e-0715
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