FFCP PHASE1:Hg19::chr6:11112056..11112083,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=405754 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33823 | |||
|TSSclassifier=strong | |||
|UniProt=P60508 | |||
|association_with_transcript=0bp_to_NM_207582_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_2_at_ERVFRD-1_5end | |||
|id=chr6:11112056..11112083,- | |||
|ontology_enrichment_celltype=CL:0000163!4.67e-20!9;CL:0002274!1.28e-15!5;CL:0000457!1.28e-15!5;CL:0002191!1.28e-15!5;CL:0000097!1.28e-15!5;CL:0000831!1.28e-15!5;CL:0002028!1.28e-15!5;CL:0000039!1.57e-09!7;CL:0000586!1.57e-09!7;CL:0002586!1.74e-09!3;CL:0000174!6.88e-09!3;CL:0000149!3.44e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.89e-45;5!CL:0000163;1.34e-35;9!CL:0002586;1.29e-12;3!CL:0000149;1.10e-09;4!CL:0000151;4.93e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.90e-45,5;CL:0002028,4.90e-45,5;CL:0000163,1.34e-35,9;CL:0002586,1.33e-12,3;CL:0000149,1.12e-09,4;CL:0000151,1.44e-08,36 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.10e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.97e-10!115;UBERON:0000966!1.49e-09!5;UBERON:0005388!1.49e-09!5;UBERON:0001802!1.49e-09!5;UBERON:0001781!1.74e-09!3;UBERON:0001782!1.74e-09!3;UBERON:0005424!1.74e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.29e-12;3!UBERON:0001782;1.29e-12;3!UBERON:0000966;6.42e-08;5!UBERON:0005388;6.42e-08;5!UBERON:0001802;6.42e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.33e-12,3;UBERON:0005424,1.33e-12,3;UBERON:0001781,1.12e-09,4;UBERON:0000966,9.97e-07,6;UBERON:0005388,9.97e-07,6;UBERON:0001802,9.97e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91342888955381,1.00416183829401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,170.954143549892,59.2565960909011,23.635405171648,37.327067934993,22.3449107164693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02056223165909,0,0,0,0,0,0,0,0,0.261435451024901,0.512900250232778,6.56029291399411,1.30151357865721,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0.383010740264733,0,0.324621940274555,1.68478306868075,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.922255617552241,2.33369875465408,0.434589487688032,0,0,1.5991043280559,1.02193298195737,0,0,0,0,0,0,1.43042921082341,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42638588066636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,5.57548137574807,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7899279887825,0,0,0,0,0,0,0.706437835654626,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.490296643507811,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0.227336094654718,0,0,0,0.426467963801962,0,0.258355639344024,0.372448285775147,0,0.0636471582781649,0,0.653150243690884,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p2@ERVFRD-1 | |||
}} |
Revision as of 09:57, 22 January 2014
Short description: | p2@ERVFRD-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ERVFRD-1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_NM_207582_5end |
EntrezGene: | ERVFRD-1 |
HGNC: | 33823 |
UniProt: | P60508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.90e-45 | 5 |
basophil mast progenitor cell | 4.90e-45 | 5 |
endocrine cell | 1.34e-35 | 9 |
retinal pigment epithelial cell | 1.33e-12 | 3 |
visual pigment cell | 1.12e-09 | 4 |
secretory cell | 1.44e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.33e-12 | 3 |
presumptive retinal pigmented epithelium | 1.33e-12 | 3 |
layer of retina | 1.12e-09 | 4 |
retina | 9.97e-07 | 6 |
photoreceptor array | 9.97e-07 | 6 |
posterior segment of eyeball | 9.97e-07 | 6 |