FFCP PHASE1:Mm9::chr1:40158220..40158223,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=106|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:40158220..40158223,+|id=chr1:40158220..40158223,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003100!8.61e-22!11;UBERON:0000474!1.74e-20!9;UBERON:0003975!3.94e-20!5;UBERON:0003134!2.38e-17!8;UBERON:0005795!2.14e-16!4;UBERON:0000995!2.14e-16!4;UBERON:0004175!2.46e-15!9;UBERON:0000014!4.85e-12!5;UBERON:0001003!4.85e-12!5;UBERON:0002097!4.85e-12!5;UBERON:0002199!4.85e-12!5;UBERON:0007029!4.85e-12!5;UBERON:0007376!4.85e-12!5;UBERON:0002416!4.85e-12!5;UBERON:0007383!4.85e-12!5;UBERON:0001987!6.84e-09!2;UBERON:0003124!6.84e-09!2;UBERON:0004340!6.84e-09!2;UBERON:0007023!7.74e-09!51;UBERON:0005156!2.30e-08!26;UBERON:0000990!2.30e-08!26;UBERON:0003133!4.16e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0006834,3.06e-23,1;UBERON:0000996,1.39e-22,1;UBERON:0003100,1.32e-18,11;UBERON:0003975,2.13e-18,5;UBERON:0001911,4.02e-12,2;UBERON:0000076,4.02e-12,2;UBERON:0005333,4.02e-12,2;UBERON:0008425,4.02e-12,2;UBERON:0005311,4.02e-12,2;UBERON:0003134,6.30e-12,8;UBERON:0004175,1.01e-10,9;UBERON:0000474,1.01e-10,9;UBERON:0000162,1.88e-08,3;UBERON:0001353,1.88e-08,3;UBERON:0000163,1.88e-08,3;UBERON:0006866,1.88e-08,3;UBERON:0001046,1.88e-08,3;UBERON:0000164,1.88e-08,3;UBERON:0000931,1.88e-08,3;UBERON:0007023,1.20e-07,51;UBERON:0005795,8.08e-07,4;UBERON:0000995,8.08e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31124095565679,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.42366414172764,0,6.5954501176592,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2697073487277,0.915758121336325,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0.436039249896986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:40158220..40158223,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=106 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:40158220..40158223,+ | |||
|description=CAGE_peak_at_chr1:40158220..40158223,+ | |||
|id=chr1:40158220..40158223,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003100!8.61e-22!11;UBERON:0000474!1.74e-20!9;UBERON:0003975!3.94e-20!5;UBERON:0003134!2.38e-17!8;UBERON:0005795!2.14e-16!4;UBERON:0000995!2.14e-16!4;UBERON:0004175!2.46e-15!9;UBERON:0000014!4.85e-12!5;UBERON:0001003!4.85e-12!5;UBERON:0002097!4.85e-12!5;UBERON:0002199!4.85e-12!5;UBERON:0007029!4.85e-12!5;UBERON:0007376!4.85e-12!5;UBERON:0002416!4.85e-12!5;UBERON:0007383!4.85e-12!5;UBERON:0001987!6.84e-09!2;UBERON:0003124!6.84e-09!2;UBERON:0004340!6.84e-09!2;UBERON:0007023!7.74e-09!51;UBERON:0005156!2.30e-08!26;UBERON:0000990!2.30e-08!26;UBERON:0003133!4.16e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,3.06e-23,1;UBERON:0000996,1.39e-22,1;UBERON:0003100,1.32e-18,11;UBERON:0003975,2.13e-18,5;UBERON:0001911,4.02e-12,2;UBERON:0000076,4.02e-12,2;UBERON:0005333,4.02e-12,2;UBERON:0008425,4.02e-12,2;UBERON:0005311,4.02e-12,2;UBERON:0003134,6.30e-12,8;UBERON:0004175,1.01e-10,9;UBERON:0000474,1.01e-10,9;UBERON:0000162,1.88e-08,3;UBERON:0001353,1.88e-08,3;UBERON:0000163,1.88e-08,3;UBERON:0006866,1.88e-08,3;UBERON:0001046,1.88e-08,3;UBERON:0000164,1.88e-08,3;UBERON:0000931,1.88e-08,3;UBERON:0007023,1.20e-07,51;UBERON:0005795,8.08e-07,4;UBERON:0000995,8.08e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31124095565679,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.42366414172764,0,6.5954501176592,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2697073487277,0.915758121336325,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0.436039249896986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:40158220..40158223,+ | |||
}} |
Latest revision as of 15:50, 5 August 2015
Short description: | p@chr1:40158220..40158223, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:40158220..40158223, + |
Coexpression cluster: | MCL_coexpression_mm9:106 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 3.06e-23 | 1 |
vagina | 1.39e-22 | 1 |
female organism | 1.32e-18 | 11 |
internal female genitalia | 2.13e-18 | 5 |
mammary gland | 4.02e-12 | 2 |
external ectoderm | 4.02e-12 | 2 |
mammary bud | 4.02e-12 | 2 |
mammary ridge | 4.02e-12 | 2 |
mammary placode | 4.02e-12 | 2 |
female reproductive organ | 6.30e-12 | 8 |
internal genitalia | 1.01e-10 | 9 |
female reproductive system | 1.01e-10 | 9 |
cloaca | 1.88e-08 | 3 |
anal region | 1.88e-08 | 3 |
embryonic cloaca | 1.88e-08 | 3 |
terminal part of digestive tract | 1.88e-08 | 3 |
hindgut | 1.88e-08 | 3 |
primitive urogenital sinus | 1.88e-08 | 3 |
proctodeum | 1.88e-08 | 3 |
adult organism | 1.20e-07 | 51 |
embryonic uterus | 8.08e-07 | 4 |
uterus | 8.08e-07 | 4 |