FFCP PHASE1:Mm9::chr3:135271325..135271343,-: Difference between revisions
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{{FFCP|EntrezGene=18033|HGNC=|MCL_coexpression_id=494|UniProt=|association_with_transcript=66bp_to_uc008rlw.1_5end|description=CAGE_peak_15_at_Nfkb1_5end|id=chr3:135271325..135271343,-|ontology_enrichment_celltype=CL:0000988!5.38e-08!32;CL:0002032!5.38e-08!32;CL:0000037!5.38e-08!32;CL:0000566!5.38e-08!32;CL:0000837!5.38e-08!32;CL:0000049!6.71e-07!19|ontology_enrichment_celltype_v019_2=CL:0000988,3.18e-13,32;CL:0002032,3.18e-13,32;CL:0000037,3.18e-13,32;CL:0000837,3.18e-13,32;CL:0000049,1.54e-11,19;CL:0002320,4.11e-09,46;CL:0000134,4.11e-09,46;CL:0000034,1.44e-08,97;CL:0000219,1.04e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.15e-10!48;UBERON:0002390!9.85e-10!45;UBERON:0003061!9.85e-10!45;UBERON:0002405!4.44e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.11e-09,46|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0,0,0,0,0,0,0.202475267389826,0,0.788655413395594,1.23402990245165,0,0.0850432901510698,4.17021995043718,3.39559725880616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,2.87556298814209,0.599902730993408,2.41433431438823,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,2.1066395619397,0.772043721344145,1.42081749697796,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0.546776910884101,0.457556346413045,3.39956859987711,1.6794174278839,1.52019971184866,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p15@Nfkb1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18033 | |||
|HGNC= | |||
|MCL_coexpression_id=494 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=66bp_to_uc008rlw.1_5end | |||
|cluster_id=chr3:135271325..135271343,- | |||
|description=CAGE_peak_15_at_Nfkb1_5end | |||
|id=chr3:135271325..135271343,- | |||
|ontology_enrichment_celltype=CL:0000988!5.38e-08!32;CL:0002032!5.38e-08!32;CL:0000037!5.38e-08!32;CL:0000566!5.38e-08!32;CL:0000837!5.38e-08!32;CL:0000049!6.71e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.18e-13,32;CL:0002032,3.18e-13,32;CL:0000037,3.18e-13,32;CL:0000837,3.18e-13,32;CL:0000049,1.54e-11,19;CL:0002320,4.11e-09,46;CL:0000134,4.11e-09,46;CL:0000034,1.44e-08,97;CL:0000219,1.04e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.15e-10!48;UBERON:0002390!9.85e-10!45;UBERON:0003061!9.85e-10!45;UBERON:0002405!4.44e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.11e-09,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0,0,0,0,0,0,0.202475267389826,0,0.788655413395594,1.23402990245165,0,0.0850432901510698,4.17021995043718,3.39559725880616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,2.87556298814209,0.599902730993408,2.41433431438823,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,2.1066395619397,0.772043721344145,1.42081749697796,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0.546776910884101,0.457556346413045,3.39956859987711,1.6794174278839,1.52019971184866,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p15@Nfkb1 | |||
}} |
Revision as of 02:07, 6 August 2015
Short description: | p15@Nfkb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Nfkb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:494 |
Association with transcript: | 66bp_to_uc008rlw.1_5end |
EntrezGene: | 18033 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.18e-13 | 32 |
hematopoietic oligopotent progenitor cell | 3.18e-13 | 32 |
hematopoietic stem cell | 3.18e-13 | 32 |
hematopoietic multipotent progenitor cell | 3.18e-13 | 32 |
common myeloid progenitor | 1.54e-11 | 19 |
connective tissue cell | 4.11e-09 | 46 |
mesenchymal cell | 4.11e-09 | 46 |
stem cell | 1.44e-08 | 97 |
motile cell | 1.04e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.11e-09 | 46 |