FFCP PHASE1:Hg19::chr8:28748052..28748063,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79618 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26137 | |||
|TSSclassifier=strong | |||
|UniProt=E5RGZ2 | |||
|association_with_transcript=-78bp_to_ENST00000519047,ENST00000521516_5end | |||
|description=CAGE_peak_4_at_HMBOX1_5end | |||
|id=chr8:28748052..28748063,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.92e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.77e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.57e-11!94;UBERON:0001016!1.57e-11!94;UBERON:0001017!4.52e-11!82;UBERON:0005743!6.66e-11!86;UBERON:0001049!1.77e-09!57;UBERON:0005068!1.77e-09!57;UBERON:0006241!1.77e-09!57;UBERON:0007135!1.77e-09!57;UBERON:0002346!7.68e-09!90;UBERON:0003075!2.44e-08!86;UBERON:0007284!2.44e-08!86;UBERON:0002780!2.86e-08!41;UBERON:0001890!2.86e-08!41;UBERON:0006240!2.86e-08!41;UBERON:0000955!3.76e-08!69;UBERON:0006238!3.76e-08!69;UBERON:0002616!4.02e-08!59;UBERON:0003080!9.99e-08!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002784;7.60e-07;4!UBERON:0002370;8.95e-07;2!UBERON:0005058;8.95e-07;2!UBERON:0009113;8.95e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,8.63e-07,4 | |||
|phase1_expression=0.181678379270557,0,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0.873765488520689,0.263766978228454,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0.408001382488506,0,0,0.410623275218653,0.87879847716362,0.305653622991805,0.0821005894499457,0.314843125254717,0,0,0.154816123316076,0,0.30120591877825,0,2.40148321798935,0.142169232487422,1.46800219667424,0,0.200544447470142,0,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0.545812300115692,0.674170453335254,0.306083892370903,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,1.21079900526674,0,0.316462387440884,0,0,0,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0,1.75996244461323,0.546138611262131,0,0,0.400395987036012,1.72425731986345,0.661044872784862,0,0.569212969109448,0,1.91136614062614,0,1.68152568894461,0.526768169550154,0.590129310341499,0.393010762749165,0,0.334372990781356,0,0.473447805734733,1.94826728407911,0.334231370655521,0.294605907474837,0.221533894583621,0.541607727530031,0,0,0,0.276350017785848,0,0.444859689486181,0,0,0.113309342697566,0,0.68725489096526,0.506039384039006,0.637130828648193,0,0,0,0.255973222308837,0,0,0,0.604820229674197,0.267440195783507,0.724122019413995,0,0,0.255725123687061,0,0,0,0,0,0.283604451492204,0.221729397462564,0.43917392846563,0.72038491523742,0,0,0,0.522389211897802,0.26591592103773,1.90792499444274,1.14398982156026,1.85728750664782,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0,0.258416759169329,0.35576626268671,1.00416183829401,0,0,0,0,0,0.357198913136319,0.22452937262617,0,0,0,0.732806975721629,0,0,0,0.993943903390637,0.25326102332916,0.132409180813219,0.860509862246441,0,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0.163461903113459,0.605429710579726,0,1.17160715916898,0,0,0,0.117434498643765,0.323745888736263,0.280901613404497,0,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0,0.841680569770331,0,0,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0,0.37223371266318,0,0.194874010322397,0.252433774244115,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0.386521706326594,0,0,0.365921118388786,0.530119073285941,0.69716365721711,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.404493924480493,0,0,0,0,0.4115740113314,0,0,0,0,3.5317047953172,0.245976877086227,0.343135620597051,0.658501712451753,0,0.201057944823262,0.185176890317059,0.325808305310325,0,0,0.463721619900307,0.117408694235822,0.288732895522148,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0.503946384596579,0,0.179117045405697,0,0,0.492663237895943,0.352193736052904,0.414656231081544,0.432359860250884,0.75745460055828,0.63497894292169,0.763976851116555,0,0,0.308482478109971,0,0.857479297891735,0.112131084345361,0.87192013766656,0.07333828582095,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0.710783897485092,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0,0.112085143993527,0.394061520403854,0.431255149719035,0,0.508189248444927,2.60279707715243,0,0.502548796003046,0.637938751653163,0,2.99161459204025,0,0.12269149171914,0,0.542530047399471,0.207970861530807,0,0,0.35142424497814,0.300946099727719,0,1.03473071292505,0,0,0.0868836144680828,0,0,0.620304078368662,0.215714200818617,0.213455115606889,0,0,0,0.248107807818777,0.61384789315225,0,0.384417447767103,0,0,0,0.308419387605311,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0.460404944679482,0,0.182091168006717,0.393373244878272,0,0.308061348417659,0,0,0.316654886678627,0,0.170093705276516,0,0,0.270946437543853,1.00337954770971,0.509752546090077,0,0,0,0,0.256450125116389,0.984043937099117,0,0.309123034943167,0.183138929636687,0.330037999682352,0,0,0,0.386682873168488,0.154048617114644,0.460511024178389,0.137836572484531,0.107420244868274,0.435050081742686,0.426133137080504,0.445160178233687,0.826424576804891,0.384380134730212,1.65896526242959,0.50578890427775,0.464845549297286,1.5740617341532,0,0,0,0.869932992075073,0,0.286249773483982,0.372158369359667,0.632758849437452,0,0,0,0,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0,0.430234056612155,0.294747123039363,0,0,0.633322905892992,0,0,0.349934720244983,0.192444225451024,0.670302275535787,0,0.376575203107117,0,0,0.443430153536676,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0.320472213382419,0,0,0.371606350251437,1.44269212976445,2.63224820389132,0.318852545457645,0.199579371432817,0.191505370132367,0.635020748171649,0,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,0.403599414382095,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0.270455678475983,0.66614393599564,0,0,0.146508179271894,0.36408156524854,0.222886768554957,0,0.23874448473769,0,0,1.9882952955326,0.422008249231538,0.445234820091624,0,0.844501632511974,0,0.276283915531148,0.251932747854276,1.32949287252801,0.615424027305347,0.311039587661807,0.0898683511473268,0.179021174675609,0.511572370226872,0.789147245095469,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,1.16641845353302,0.347249989866585,0,0.482385754501632,0,0.442317039724898,0.295547618953547,0.438770794307945,0.435753854075961,0.278847488557207,0.0769502585037971,0.341826167541004,0,0.538545866458633,0.108647371922008,0.31900115973192,0.183195186803725,0,0,0.470940769185074,1.66211681900156,0.451191321234361,1.17637520590644,1.00692952185506,0.948768663620925,4.92703394839174,0.421996129056054,0,0.282706142867882,1.73110911793673,0,0.353830258013357,0,0.296521128680622,0.247127877893006,0.104421949505455,1.41542379259422,0,0.468528891450678,0.182454789215666,0.19566461893209,0.242780379534093,0,0,0.30607276163049,1.0741718536843,1.05226393590145,0.311064574191741,0,0,0.313932918407225,0,0,0.554698692052555,0,0.783939179315021,0.34823682632161,0.698906672968121,0.687944129886466,0.290268993867255,0.219267951258557,0.328461828212837,0.0969890164884194,0.617792886840502,1.12990370390266,0.274083849293502,0.596143835108969,0.759729551470544,0.391102765469606,0.160317640503067,0,0.599428828746391,0,0.458146384663663,2.05913997434357,0,0.745515213392595,0,0.135904206073614,0.313808538937,0.305994652908965,0.577901179803038,2.40168115483916,1.23214841002794,1.27746588066972,1.71906176567983,0,0.837847203816763,0,1.43574604915363,0.199679000498991,0,0.446342914883745,3.42635709682304,0.360299883542404,0,0.236349546921671,0.659326867049332,0.337017719270924,1.27955725969173,0.254019996197353,0,0.681017030557878,0.321506296930038,1.10031549277787,0.415440338029185,1.5748172408605,0,0.546746009922222,0,0.236417121897595,0.891727998294968,0.528001682597033,0.179287339332845,0.959575986597226,0,0.662091970365432,0.25426853765475,0,0,0,0,2.29859058098149,0.170388021785422,0.679872549120754,0.146552233678082,1.32506888912221,0.775697738169303,0.26446520348538,1.02652102730598,0.704815022316672,1.06787412567695,1.25763444079733,0,0.992332043623902,0,0.121792598380896,0,0.544017803369474,0.2506898940227,0,0.327872630709804,0.314108192500469,1.77213635993397,1.09823638411767,0.500763722825999,0.573409195690071,0.887432412294818,0.931446044120752,0.968440444553616,0,1.81978941049977,2.28372266835974,0.235265819698172,0.936669811613763,0.28984205722165,0.298509605773748,0,0,0.189403005275089,0,0,0.457680136793847,0.302461847526478,0.15543720058278,0,0.318593534327405,0.449803112163605,0.310525913752519,0,1.32920857278997,0.521745061811734,0.300515217994437,0,0,0,0.429642228169954,0.928067519756987,0,0.400027764663154,0.343395705182793,0,1.26184898228651,0.385239660814607,0.857766365499703,1.30497145982606,0,0.463044948647668,1.22368352253234,0.179088841081487,0.308801447160972,0.657852148736121,0.176689145945881,0.192914038270915,0,0.256241518587947,0,0,0.276516872303462,0.194860308839388,0.265729680626726,0.981392365535065,0,0.737318726261158,0.211312123358627,0,0,0,0.567515953566836,0,0.419638523158333,0.622077260032973,1.79052119825112,0.754773679776773,0.314531883711793,2.83945059299236,0.509197589862076,1.2754495206101,0.743614585554013,0.558644917973244,0.318004350653419,1.65609664502632,0,0,0,0.963438376446893,0,0.319267718114302,0.615349092722265,0.756215088665154,0.207471757392654,0.322951291263702,0,0.294443155503077,0.707818340086442,0.183428598521679,0,1.52552838186867,0.690359926060101,0.397832444232549,0.376051641746286,0.60511520611056,0,0.261906694481422,0.49131575253029,0.147856086217045,0.405225507710368,0.781078098613847,0.413373593002368,0.760989722326882,0,0,0,0,0.127762427639595,2.14280734351315,0.672567444437648,0.606965604236632,1.36597314810779,0.443511850813194,0.460935950223117,0.171488009437418,0.543757863814654,0.591954962065642,0.118193840883968,0.222462803784138,0.235479278551542,0.157115589916002,0.840816489941367,0,0,0,0.214429632529969,0.94808167039636,0,0.695433089210318,0,0.414432328326074,0.17071847709395,0,0.430227358820278,0,0.170426809518315,0.423387050190929,0.68732060563215,0,0,0.223710863595585,0,0.121917924982269,0,0.102662806856247,0,0.971421986118279,0.701818390386317,1.19370465096821,0.237840181555137,0.33883824611688,4.61750170330802,0.301925687133347,0.0771741581079447,0,0,0.735444965261716,0.235676547101626,0.588925401344836,0.891139200981258,1.2679671827502,0.849635573439084,0.187967835959707,1.03132620757723,0,0,0,0.160482733378337,0.730336388246517,0.917458566809082,0.573358332605805,0.315543124386369,0.747906392100062,1.74540276136151,0.5290268405154,0.371995018166751,0.462175628631418,0,0.504665699340316,0.109265571963696,0.633492505057185,0.407955318967927,0,0.275684698604535,0,1.21245917149183,0.803892390468535,1.65833887891756,1.13776295448085,0,0.23806443146374,1.35636710655613,3.35203457197633,0.112131862580613,0.827413057616144,0.202117188958219,0,0,0.134704106029175,0.358611026963382,0.332660356546013,1.05824249194267,0.426909383510862,0,0.0898252021065869,0,0.733448665097199,0.406896178315738,0,0.201273793591026,0.320568492303233 | |||
|short_description=p4@HMBOX1 | |||
}} |
Revision as of 21:28, 22 January 2014
Short description: | p4@HMBOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HMBOX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -78bp_to_ENST00000519047, ENST00000521516_5end |
EntrezGene: | HMBOX1 |
HGNC: | 26137 |
UniProt: | E5RGZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.92e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 8.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.77e-07 | 2 |