FFCP PHASE1:Hg19::chr8:70539477..70539491,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C637 | |||
|description=CAGE_peak_at_chr8:70539477..70539491,+ | |||
|id=chr8:70539477..70539491,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.04e-12!180;CL:0000057!3.69e-11!75;CL:0002620!1.27e-09!23;CL:0000153!2.11e-08!9;CL:0000447!2.11e-08!9;CL:0000499!1.41e-07!27;CL:0000077!3.00e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.08e-16;23!CL:0000077;3.51e-11;19!CL:0000153;3.27e-10;9!CL:0000447;3.27e-10;9!CL:0002579;5.71e-09;3!CL:0002580;4.25e-08;3!CL:0000135;8.18e-08;3!CL:0000388;8.18e-08;3!CL:0000138;1.10e-07;6!CL:0000327;1.24e-07;15!CL:0002334;2.72e-07;12!CL:0000197;2.84e-07;6!CL:0000098;2.84e-07;6!CL:0002167;2.84e-07;6!CL:0000499;3.95e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.56e-17,76;CL:0002620,6.59e-16,23;CL:0000077,3.14e-11,19;CL:0000153,2.92e-10,9;CL:0000447,2.92e-10,9;CL:0002579,5.97e-09,3;CL:0002580,4.77e-08,3;CL:0000135,6.75e-08,3;CL:0000388,6.75e-08,3;CL:0000058,1.08e-07,6;CL:0000138,1.08e-07,6;CL:0000327,1.15e-07,15;CL:0002334,2.92e-07,12;CL:0000197,2.97e-07,6;CL:0000098,2.97e-07,6;CL:0002167,2.97e-07,6;CL:0000499,3.53e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.14e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.31e-08;14!DOID:17;2.95e-08;5!DOID:450;2.95e-08;5!DOID:66;2.95e-08;5!DOID:423;2.95e-08;5!DOID:0080000;2.95e-08;5!DOID:11722;2.95e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.51e-08,14;DOID:17,3.49e-08,5;DOID:450,3.49e-08,5;DOID:66,3.49e-08,5;DOID:423,3.49e-08,5;DOID:0080000,3.49e-08,5;DOID:11722,3.49e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!7.22e-08!6;UBERON:0002358!7.22e-08!6;UBERON:0003684!7.22e-08!6;UBERON:0001178!7.22e-08!6;UBERON:0004457!3.27e-07!12;UBERON:0000042!3.27e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.58e-10;9!UBERON:0000042;4.58e-10;9!UBERON:0007846;8.18e-08;3!UBERON:0000043;8.18e-08;3!UBERON:0007845;8.18e-08;3!UBERON:0003688;1.55e-07;6!UBERON:0002358;1.55e-07;6!UBERON:0003684;1.55e-07;6!UBERON:0001178;1.55e-07;6!UBERON:0002097;1.61e-07;41!UBERON:0002199;7.18e-07;46!UBERON:0002416;7.18e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.81e-10,41;UBERON:0002199,6.09e-09,46;UBERON:0002416,6.09e-09,46;UBERON:0007846,6.75e-08,3;UBERON:0000043,6.75e-08,3;UBERON:0007845,6.75e-08,3;UBERON:0003688,1.74e-07,6;UBERON:0002358,1.74e-07,6;UBERON:0003684,1.74e-07,6;UBERON:0001178,1.74e-07,6;UBERON:0004457,2.39e-07,12;UBERON:0000042,2.39e-07,12 | |||
|phase1_expression=1.09007027562334,1.49870366723688,0.986680828671798,3.00219895059391,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,7.22878304769133,4.51204119572301,7.09747942908036,2.3858578411533,0.486634870302636,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,1.98788780678127,1.77282716330412,0.132409180813219,2.29469296599051,1.06400514659507,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0,0.300476117813194,0.453728732640084,5.56107870635472,1.49490172172997,0.635795703478686,2.10063767259082,1.23663035086127,3.60696756063881,4.46680455195816,5.73839529620305,2.63079913935236,1.26216887122057,0.828449087780694,9.5371173523099,3.19508633264953,1.10827308050404,1.86516651541536,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,6.03678306441573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0,0,1.14152491340759,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71470603091333,0,0,6.91439103120663,4.16029747645464,0,0,0,0,0,0,0,0,0,0,0,1.99945982364114,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.858840442033979,0.500170521059677,0,6.23912584592421,3.39015078714607,3.31175071571263,1.28855556491985,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,1.48864684691266,1.2276957863045,5.05188169979532,2.30650468660262,7.16390148693385,4.18220194973379,0,0,0.710246901252508,0.0821271560138091,0,0,0,0,0,0.459257792658427,0.910455840033585,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0.107420244868274,0,0,0.623224249527161,0,0,0,0.10115778085555,0.464845549297286,2.83331112147576,0,0,0,0,0.37064843820784,0.429374660225974,0,0,0,0,0,0,0,0.179872457583315,0.823611089208164,0.117812402345686,0,0,0,0,4.14312932373184,0,2.59349831675173,2.68670320712054,0,0,0.66343897524122,0.438450885253763,0,0,0,0.6196469961995,0,0.286822704408103,0.294747123039363,0,0,1.68886108238131,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,2.1983422416447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0,0.939797545549098,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,3.61170668190395,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,2.5926644736038,0,0,0,2.04465626142506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0.573409195690071,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0.50313580350515,0.889811221596536,0.686520205190771,0,0.310874401165561,0.147855149989634,0.63718706865481,0.449803112163605,0,0,5.0509925766019,8.86966605079948,1.50257608997218,10.6625459407263,3.25496586563729,0,1.07410557042488,0.464033759878494,11.5447807722599,0,1.71697852591396,0.673498977531838,0,0,2.78774068787403,0.521988583930423,6.5744718398559,3.47283711485751,1.46842022703881,2.14906609297785,0,3.0699766941019,1.23682402162117,0,0.337884881306145,0,0,1.21543982470953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0.352675943690684,3.3687002508852,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,7.62764190934334,0,0.198916222116275,0,0,0,0,9.66254313309571,0,0,0,0,0,0,0,2.48105589194647,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0.62164849248911,0.17071847709395,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,3.56846940844415,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0,0,1.48798007266701,1.84870251452567,2.16313281061895,0,0,0,0.101988829741982,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0,0,0.112131862580613,0.190941474834495,0,0.217716747896961,0.684466602170562,0,0.143444410785353,0.665320713092027,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr8:70539477..70539491,+ | |||
}} |
Revision as of 22:27, 22 January 2014
Short description: | p@chr8:70539477..70539491, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:70539477..70539491, + |
Coexpression cluster: | C637_osteoclastoma_Fibroblast_Preadipocyte_Chondrocyte_spindle_hepatic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.56e-17 | 76 |
skin fibroblast | 6.59e-16 | 23 |
mesothelial cell | 3.14e-11 | 19 |
GAG secreting cell | 2.92e-10 | 9 |
carbohydrate secreting cell | 2.92e-10 | 9 |
omentum preadipocyte | 5.97e-09 | 3 |
preadipocyte of the breast | 4.77e-08 | 3 |
fibrocyte | 6.75e-08 | 3 |
tendon cell | 6.75e-08 | 3 |
chondroblast | 1.08e-07 | 6 |
chondrocyte | 1.08e-07 | 6 |
extracellular matrix secreting cell | 1.15e-07 | 15 |
preadipocyte | 2.92e-07 | 12 |
receptor cell | 2.97e-07 | 6 |
sensory epithelial cell | 2.97e-07 | 6 |
olfactory epithelial cell | 2.97e-07 | 6 |
stromal cell | 3.53e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.81e-10 | 41 |
integument | 6.09e-09 | 46 |
integumental system | 6.09e-09 | 46 |
dense regular connective tissue | 6.75e-08 | 3 |
tendon | 6.75e-08 | 3 |
regular connective tissue | 6.75e-08 | 3 |
omentum | 1.74e-07 | 6 |
peritoneum | 1.74e-07 | 6 |
abdominal cavity | 1.74e-07 | 6 |
visceral peritoneum | 1.74e-07 | 6 |
cavity lining | 2.39e-07 | 12 |
serous membrane | 2.39e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.51e-08 | 14 |
musculoskeletal system disease | 3.49e-08 | 5 |
myotonic disease | 3.49e-08 | 5 |
muscle tissue disease | 3.49e-08 | 5 |
myopathy | 3.49e-08 | 5 |
muscular disease | 3.49e-08 | 5 |
myotonic dystrophy | 3.49e-08 | 5 |