FFCP PHASE1:Hg19::chr9:118919556..118919561,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1486 | |||
|description=CAGE_peak_at_chr9:118919556..118919561,+ | |||
|id=chr9:118919556..118919561,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.64e-16!75;CL:0002620!3.25e-12!23;CL:1000306!8.93e-10!4;CL:0002547!8.93e-10!4;CL:0000055!1.91e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:1000306;4.60e-23;4!CL:0002547;4.60e-23;4!CL:0002570;4.67e-12;8!CL:0002580;9.66e-09;3!CL:0000346;1.26e-08;3!CL:1000428;1.26e-08;3!CL:0002579;1.26e-08;3!CL:0002334;2.51e-08;12!CL:0000048;6.59e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,3.68e-23,4;CL:0002547,3.68e-23,4;CL:0002570,4.67e-12,8;CL:0002580,9.66e-09,3;CL:0000346,1.12e-08,3;CL:1000428,1.12e-08,3;CL:0002579,1.51e-08,3;CL:0002334,2.75e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.74e-07!5;DOID:450!3.74e-07!5;DOID:66!3.74e-07!5;DOID:423!3.74e-07!5;DOID:0080000!3.74e-07!5;DOID:11722!3.74e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!8.93e-10!4;UBERON:0007240!8.93e-10!4;UBERON:0005742!8.93e-10!4;UBERON:0005734!8.93e-10!4;UBERON:0004664!8.93e-10!4;UBERON:0004663!8.93e-10!4;UBERON:0002097!1.67e-09!40;UBERON:0002199!3.87e-09!45;UBERON:0002416!3.87e-09!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;4.60e-23;4!UBERON:0000415;4.60e-23;4!UBERON:0007240;4.60e-23;4!UBERON:0005742;4.60e-23;4!UBERON:0005734;4.60e-23;4!UBERON:0004664;4.60e-23;4!UBERON:0004663;4.60e-23;4!UBERON:0000412;1.26e-08;3!UBERON:0001992;1.26e-08;3!UBERON:0001013;2.77e-07;14!UBERON:0002346;8.85e-07;4!UBERON:0000923;8.85e-07;4!UBERON:0010316;8.85e-07;4!UBERON:0005291;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,3.68e-23,4;UBERON:0007240,3.68e-23,4;UBERON:0005742,3.68e-23,4;UBERON:0005734,3.68e-23,4;UBERON:0004664,3.68e-23,4;UBERON:0004663,3.68e-23,4;UBERON:0004797,1.08e-13,7;UBERON:0000412,1.12e-08,3;UBERON:0001992,1.12e-08,3;UBERON:0001013,2.77e-07,14 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,7.15009576391382,1.72101972449288,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.717558542755448,0.85422955527427,0.211931901159562,0,0.206105058476878,0.515281080091258,0,0.168776332241266,0.389748020644795,0,0.276149695926898,0.161646056818812,0.710019185033229,0.201504196455281,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,7.15312891703765,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.455391572609,0.280660094433074,0.768834895534206,1.02341449813341,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0.94443704049192,0,0,0.532306030317022,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0.282810863907425,0,0.551365343546124,0,0,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0.5085370753095,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,1.16856654923612,0,0.378806010550178,0.50313580350515,0,0.915360273587694,0.302461847526478,0,0.73927574994817,0,0.899606224327209,0,0,0,0,0.300515217994437,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.314531883711793,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,1.23109871051734,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:118919556..118919561,+ | |||
}} |
Revision as of 03:01, 23 January 2014
Short description: | p@chr9:118919556..118919561, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:118919556..118919561, + |
Coexpression cluster: | C1486_Fibroblast_Mesenchymal_Hair_mesenchymal_Preadipocyte_Smooth_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 3.68e-23 | 4 |
fibroblast of the aortic adventitia | 3.68e-23 | 4 |
mesenchymal stem cell of adipose | 4.67e-12 | 8 |
preadipocyte of the breast | 9.66e-09 | 3 |
hair follicle dermal papilla cell | 1.12e-08 | 3 |
stem cell of epidermis | 1.12e-08 | 3 |
omentum preadipocyte | 1.51e-08 | 3 |
preadipocyte | 2.75e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
artery wall | 3.68e-23 | 4 |
tunica adventitia of artery | 3.68e-23 | 4 |
adventitia | 3.68e-23 | 4 |
tunica adventitia of blood vessel | 3.68e-23 | 4 |
aorta tunica adventitia | 3.68e-23 | 4 |
aorta wall | 3.68e-23 | 4 |
blood vessel layer | 1.08e-13 | 7 |
dermal papilla | 1.12e-08 | 3 |
papillary layer of dermis | 1.12e-08 | 3 |
adipose tissue | 2.77e-07 | 14 |