FFCP PHASE1:Mm9::chr5:77780374..77780389,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=850|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:77780374..77780389,-|id=chr5:77780374..77780389,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,3.29e-15,3;CL:0000737,3.29e-15,3;CL:0000746,3.29e-15,3;CL:0000513,3.29e-15,3;CL:0000068,1.05e-14,3;CL:0002202,1.05e-14,3;CL:0000069,1.05e-14,3;CL:0002632,1.05e-14,3;CL:0002368,1.05e-14,3;CL:0000307,1.05e-14,3;CL:0000377,1.05e-14,3;CL:0000680,1.08e-12,6;CL:0000187,1.08e-12,6;CL:0000056,1.08e-12,6;CL:0000222,6.72e-11,7;CL:0000355,1.68e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.54e-07!66;UBERON:0002100!8.70e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.05e-14,3;UBERON:0001005,1.05e-14,3;UBERON:0007196,1.05e-14,3;UBERON:0001558,1.05e-14,3;UBERON:0003103,2.63e-11,43;UBERON:0001134,1.68e-08,9;UBERON:0002036,1.68e-08,9;UBERON:0002385,1.68e-08,9;UBERON:0000486,1.68e-08,9;UBERON:0007503,1.68e-08,9;UBERON:0001015,1.68e-08,9;UBERON:0002329,1.68e-08,9;UBERON:0003082,1.68e-08,9;UBERON:0003059,1.68e-08,9;UBERON:0007282,1.68e-08,9;UBERON:0004290,1.68e-08,9;UBERON:0009618,1.68e-08,9;UBERON:0000383,1.16e-07,10;UBERON:0002100,1.22e-07,90;UBERON:0007524,5.70e-07,11;UBERON:0003077,5.70e-07,11;UBERON:0007285,5.70e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,1.10128051297009,0.782391344348039,0.218025156380447,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,10.0331180054019,6.30373567865265,13.9231464914909,0,0,0,2.03306719241479,0.889294796111139,0.899899717281399,0.988866362566974,2.1314403448383,1.19840044207362,0,0,0,0,0,0.441737081903227,0,0.0958454710182364,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0.852151612890289,0.519572009205738,0.70667914902068,0,1.28326477414318,0,0,3.46385665617943,2.28023878927589,5.05524445014783,0.5709193985953,0,0.29688427812965,0.346970653532272,0.608930956624282,0.691846491768175,1.50722640552623,0.705532242814229,0.628332956648377,0,0.144599356919912,0,0.323533699894818,0.662524555381181,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0.305518091550949,0,0.252722758433675,0,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0.61734640922383,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0.116765342367169,0.329119699826961,0.820837320395476,0.324275238183423,0.292399974850665,1.09775057645525,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.329397909448022,0.502670417600539,0.596869416123452,0.974820435595601,1.79763881730844,0.648414149624083,0.796565093017469,0,0,0,0.407302655690628,0.775809948670503,0.98190147846446,1.96033265085198,2.50937251565324,2.04098346193787,2.34454611451421,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0,0.482443521363367,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,1.47476983244164,0.863424909329478,0.867894351489069,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0.283880170416537,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0.329098041204242,0,0,0.42366414172764,0,0,0.161464426695906,0,0.238744688006273,0.164140899745061,0,0,0.683483523191411,0,0.370389054739423,0.941842285023455,0.546776910884101,0.686334519619568,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.404593039154462,0.165306911450672,0,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0.168956125490778,0.117357238645754,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0.15241361331,0,0.194915761479505,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0.501572104035363,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0,0.685738504770831,0,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0.818462086339379,0,0,0,0,0,0,0,0|short_description=p@chr5:77780374..77780389,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=850 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:77780374..77780389,- | |||
|description=CAGE_peak_at_chr5:77780374..77780389,- | |||
|id=chr5:77780374..77780389,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,3.29e-15,3;CL:0000737,3.29e-15,3;CL:0000746,3.29e-15,3;CL:0000513,3.29e-15,3;CL:0000068,1.05e-14,3;CL:0002202,1.05e-14,3;CL:0000069,1.05e-14,3;CL:0002632,1.05e-14,3;CL:0002368,1.05e-14,3;CL:0000307,1.05e-14,3;CL:0000377,1.05e-14,3;CL:0000680,1.08e-12,6;CL:0000187,1.08e-12,6;CL:0000056,1.08e-12,6;CL:0000222,6.72e-11,7;CL:0000355,1.68e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.54e-07!66;UBERON:0002100!8.70e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.05e-14,3;UBERON:0001005,1.05e-14,3;UBERON:0007196,1.05e-14,3;UBERON:0001558,1.05e-14,3;UBERON:0003103,2.63e-11,43;UBERON:0001134,1.68e-08,9;UBERON:0002036,1.68e-08,9;UBERON:0002385,1.68e-08,9;UBERON:0000486,1.68e-08,9;UBERON:0007503,1.68e-08,9;UBERON:0001015,1.68e-08,9;UBERON:0002329,1.68e-08,9;UBERON:0003082,1.68e-08,9;UBERON:0003059,1.68e-08,9;UBERON:0007282,1.68e-08,9;UBERON:0004290,1.68e-08,9;UBERON:0009618,1.68e-08,9;UBERON:0000383,1.16e-07,10;UBERON:0002100,1.22e-07,90;UBERON:0007524,5.70e-07,11;UBERON:0003077,5.70e-07,11;UBERON:0007285,5.70e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,1.10128051297009,0.782391344348039,0.218025156380447,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,10.0331180054019,6.30373567865265,13.9231464914909,0,0,0,2.03306719241479,0.889294796111139,0.899899717281399,0.988866362566974,2.1314403448383,1.19840044207362,0,0,0,0,0,0.441737081903227,0,0.0958454710182364,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0.852151612890289,0.519572009205738,0.70667914902068,0,1.28326477414318,0,0,3.46385665617943,2.28023878927589,5.05524445014783,0.5709193985953,0,0.29688427812965,0.346970653532272,0.608930956624282,0.691846491768175,1.50722640552623,0.705532242814229,0.628332956648377,0,0.144599356919912,0,0.323533699894818,0.662524555381181,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0.305518091550949,0,0.252722758433675,0,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0.61734640922383,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0.116765342367169,0.329119699826961,0.820837320395476,0.324275238183423,0.292399974850665,1.09775057645525,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.329397909448022,0.502670417600539,0.596869416123452,0.974820435595601,1.79763881730844,0.648414149624083,0.796565093017469,0,0,0,0.407302655690628,0.775809948670503,0.98190147846446,1.96033265085198,2.50937251565324,2.04098346193787,2.34454611451421,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0,0.482443521363367,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,1.47476983244164,0.863424909329478,0.867894351489069,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0.283880170416537,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0.329098041204242,0,0,0.42366414172764,0,0,0.161464426695906,0,0.238744688006273,0.164140899745061,0,0,0.683483523191411,0,0.370389054739423,0.941842285023455,0.546776910884101,0.686334519619568,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.404593039154462,0.165306911450672,0,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0.168956125490778,0.117357238645754,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0.15241361331,0,0.194915761479505,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0.501572104035363,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0,0.685738504770831,0,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0.818462086339379,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:77780374..77780389,- | |||
}} |
Latest revision as of 15:23, 4 August 2015
Short description: | p@chr5:77780374..77780389, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:77780374..77780389, - |
Coexpression cluster: | MCL_coexpression_mm9:850 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 3.29e-15 | 3 |
striated muscle cell | 3.29e-15 | 3 |
cardiac muscle cell | 3.29e-15 | 3 |
cardiac muscle myoblast | 3.29e-15 | 3 |
duct epithelial cell | 1.05e-14 | 3 |
epithelial cell of tracheobronchial tree | 1.05e-14 | 3 |
branched duct epithelial cell | 1.05e-14 | 3 |
epithelial cell of lower respiratory tract | 1.05e-14 | 3 |
respiratory epithelial cell | 1.05e-14 | 3 |
tracheal epithelial cell | 1.05e-14 | 3 |
tracheoblast | 1.05e-14 | 3 |
muscle precursor cell | 1.08e-12 | 6 |
muscle cell | 1.08e-12 | 6 |
myoblast | 1.08e-12 | 6 |
mesodermal cell | 6.72e-11 | 7 |
multi-potent skeletal muscle stem cell | 1.68e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.05e-14 | 3 |
respiratory airway | 1.05e-14 | 3 |
tracheobronchial tree | 1.05e-14 | 3 |
lower respiratory tract | 1.05e-14 | 3 |
compound organ | 2.63e-11 | 43 |
skeletal muscle tissue | 1.68e-08 | 9 |
striated muscle tissue | 1.68e-08 | 9 |
muscle tissue | 1.68e-08 | 9 |
multilaminar epithelium | 1.68e-08 | 9 |
epithelial vesicle | 1.68e-08 | 9 |
musculature | 1.68e-08 | 9 |
somite | 1.68e-08 | 9 |
myotome | 1.68e-08 | 9 |
presomitic mesoderm | 1.68e-08 | 9 |
presumptive segmental plate | 1.68e-08 | 9 |
dermomyotome | 1.68e-08 | 9 |
trunk paraxial mesoderm | 1.68e-08 | 9 |
musculature of body | 1.16e-07 | 10 |
trunk | 1.22e-07 | 90 |
dense mesenchyme tissue | 5.70e-07 | 11 |
paraxial mesoderm | 5.70e-07 | 11 |
presumptive paraxial mesoderm | 5.70e-07 | 11 |