FFCP PHASE1:Hg19::chrX:152770101..152770112,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=633 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1044 | |||
|TSSclassifier=strong | |||
|UniProt=P21810 | |||
|association_with_transcript=11bp_to_BT007323_5end | |||
|coexpression_cluster_id=C288 | |||
|description=CAGE_peak_23_at_BGN_5end | |||
|id=chrX:152770101..152770112,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.66e-19!180;CL:0000057!1.82e-12!75;CL:0000359!6.08e-10!32;CL:0000183!6.78e-10!59;CL:0000187!8.04e-10!54;CL:0000222!1.01e-09!119;CL:0000680!3.02e-09!57;CL:0000056!3.02e-09!57;CL:0000355!3.02e-09!57;CL:0000393!2.14e-08!60;CL:0000211!2.14e-08!60;CL:0000327!2.58e-08!14;CL:0000192!5.85e-08!42;CL:0000514!5.85e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000327;1.20e-15;15!CL:0000499;1.58e-10;28!CL:0000138;5.59e-10;6!CL:0000153;8.18e-09;9!CL:0000447;8.18e-09;9!CL:0002548;9.63e-09;6!CL:0002494;5.50e-07;16!CL:0000708;8.20e-07;3!CL:0000197;9.18e-07;6!CL:0000098;9.18e-07;6!CL:0002167;9.18e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000327,7.02e-16,15;CL:0000499,1.07e-10,28;CL:0000058,4.97e-10,6;CL:0000138,4.97e-10,6;CL:0000057,1.29e-09,76;CL:0000153,5.94e-09,9;CL:0000447,5.94e-09,9;CL:0002548,8.00e-09,6;CL:0002494,6.36e-07,16;CL:0000708,8.26e-07,3;CL:0000197,9.05e-07,6;CL:0000098,9.05e-07,6;CL:0002167,9.05e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.09e-18!79;UBERON:0007798!2.09e-18!79;UBERON:0004872!4.69e-18!84;UBERON:0001009!7.73e-17!113;UBERON:0000055!2.21e-16!69;UBERON:0001981!3.63e-16!60;UBERON:0007500!3.63e-16!60;UBERON:0004537!3.63e-16!60;UBERON:0006965!3.63e-16!60;UBERON:0004535!1.05e-15!110;UBERON:0001637!8.43e-15!42;UBERON:0003509!8.43e-15!42;UBERON:0004572!8.43e-15!42;UBERON:0004573!3.39e-13!33;UBERON:0004571!3.39e-13!33;UBERON:0003914!5.97e-12!118;UBERON:0000947!7.73e-10!21;UBERON:0010191!7.73e-10!21;UBERON:0001134!2.02e-09!61;UBERON:0002036!2.02e-09!61;UBERON:0003082!2.02e-09!61;UBERON:0007100!6.45e-09!27;UBERON:0000914!7.19e-09!83;UBERON:0002329!7.19e-09!83;UBERON:0003077!7.19e-09!83;UBERON:0003059!7.19e-09!83;UBERON:0007282!7.19e-09!83;UBERON:0009618!7.19e-09!83;UBERON:0007285!7.19e-09!83;UBERON:0002385!9.64e-09!63;UBERON:0001015!9.64e-09!63;UBERON:0000383!9.64e-09!63;UBERON:0004290!1.14e-08!70;UBERON:0000477!1.66e-08!286;UBERON:0000025!3.80e-08!194;UBERON:0000948!1.10e-07!24;UBERON:0005498!1.10e-07!24;UBERON:0004140!1.10e-07!24;UBERON:0009881!1.10e-07!24;UBERON:0004141!1.10e-07!24;UBERON:0003084!1.10e-07!24;UBERON:0007005!1.10e-07!24;UBERON:0004139!1.10e-07!24;UBERON:0004291!1.10e-07!24;UBERON:0004111!1.38e-07!241;UBERON:0000486!8.15e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.70e-10;33!UBERON:0004571;7.70e-10;33!UBERON:0007100;1.56e-09;25!UBERON:0000948;2.09e-09;22!UBERON:0001637;2.04e-08;42!UBERON:0003509;2.04e-08;42!UBERON:0004572;2.04e-08;42!UBERON:0003210;8.20e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.97e-11,83;UBERON:0004573,5.65e-11,33;UBERON:0004571,5.65e-11,33;UBERON:0003914,9.79e-11,117;UBERON:0001637,3.05e-10,42;UBERON:0003509,3.05e-10,42;UBERON:0004572,3.05e-10,42;UBERON:0007100,5.49e-10,27;UBERON:0000948,7.41e-10,24;UBERON:0005498,7.41e-10,24;UBERON:0004140,7.41e-10,24;UBERON:0009881,7.41e-10,24;UBERON:0004141,7.41e-10,24;UBERON:0003084,7.41e-10,24;UBERON:0007005,7.41e-10,24;UBERON:0004139,7.41e-10,24;UBERON:0004291,7.41e-10,24;UBERON:0001009,8.93e-10,112;UBERON:0004535,1.98e-09,109;UBERON:0007500,3.14e-09,59;UBERON:0001981,3.14e-09,59;UBERON:0004537,3.14e-09,59;UBERON:0006965,3.14e-09,59;UBERON:0002049,1.97e-08,78;UBERON:0007798,1.97e-08,78;UBERON:0000055,2.61e-08,68;UBERON:0004797,7.09e-08,7;UBERON:0003210,8.26e-07,3;UBERON:0000947,8.59e-07,21;UBERON:0010191,8.59e-07,21 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.140954404095971,1.0007329835313,0,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0.612002073732759,0.626909442956176,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,6.01605492763067,3.33146993609895,19.8821486762775,14.1124112387764,0,0.221729397462564,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,1.73570250803797,1.69592382577203,0,0.825354125820202,0.208994966536811,0,0,0.33472061276467,0,0,0.732186172644509,0,0.81014194788176,0.446498641420399,0.22452937262617,0.225222960966644,0,0,0.549605231791222,0,0,0,3.47880366186723,2.65924074495618,0,4.58938593198102,1.06400514659507,1.68203280042692,4.2699598291882,2.71334303258876,0,1.21239604862719,1.30769522490767,1.81628913173918,7.49028701823999,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,0,0.989067717114227,0.910161361938026,0,0.168336113954066,0.375355559615893,0,0,0,0.45071417671979,0.113432183160021,0.89694817844431,0.640672166455702,0.847727604638247,0.300091096084402,0.515262646192195,0.772921620136887,0.37223371266318,1.0126579934476,1.36411807225678,0,0.460249493211497,1.13152239773168,2.13005755509969,0.604512589365842,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,0,3.21620469096443,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0.4115740113314,1.47008711385542,0,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0.925971025153221,1.71228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23344192779897,2.1798003441664,1.466765716419,0.646358578788889,0,3.381211010224,0.531876233169741,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,2.15662369942424,4.59447743336456,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,1.34960640891054,3.00102312635806,0.271265023699736,7.07100929204744,8.20773348466944,2.52323864054295,4.4513737697231,1.80567659836631,4.5481500811197,4.1389228517002,0,0.737476674166813,0.0868836144680828,3.72022199179207,8.92172901908225,0,0,0,0,0,0,0,0.920771839728375,4.49056151092918,0.256278298511402,1.02341449813341,2.0911009748669,1.48418066444991,1.07946785661859,0.887808626565635,0,1.03850885836724,0.813472649219715,0,0,0,0,0.546273504020151,0.131124414959424,0,0,0,0,0,1.13733384070897,0,0.863663664408557,7.71136263451447,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.676695028044854,0.462145851343933,0.767518373630648,0.275673144969061,0.429680979473094,0.435050081742686,0.340906509664404,1.33548053470106,0,0,0,0,1.85938219718914,2.20368642781448,0.6970372701606,1.23213432070436,0,0.869932992075073,1.29726953372744,0.715624433709956,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,3.13979456079692,0.179872457583315,0.274537029736055,0.117812402345686,1.01091240786658,1.58510321173008,0,0,0.731140468893853,0,0,0.282810863907425,1.13008116620243,0.551365343546124,4.64407282668854,1.31535265576129,0,0,0,1.239293992399,0.845086807596724,0,0,0.35667105148125,0,1.68886108238131,0.658589785919804,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3383350365877,0,0,0,0,1.55519793830904,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0,0.438770794307945,0,0,0.538651809526579,0,0,0,0,0.31900115973192,0.0915975934018623,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,1.58186518546373,0,0,0,0,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,4.18923601908381,2.06244381610515,0.717873024576814,0.599037001496973,1.28767814440971,0.223171457441873,0.470284307407084,2.52209918479682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0,2.1440859791201,0,0,0,0,0.653174720218818,0,0,0,0.339936274560377,0.293104467356165,1.32506888912221,0,0.26446520348538,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.895528817321244,2.33713309847224,0.554805861502613,0.378806010550178,0.754703705257725,0,0,1.05861646634267,0.932623203496683,0.591420599958536,0.318593534327405,0,0.155262956876259,0.414706207840855,1.06336685823198,0.521745061811734,0.300515217994437,0,0.813741466409323,0,0.214821114084977,0,0.796191777397232,0,1.37358282073117,0.673498977531838,1.26184898228651,0,0,0.260994291965212,0,0,0,0,0.308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| |||
|short_description=p23@BGN | |||
}} |
Revision as of 07:24, 23 January 2014
Short description: | p23@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_23_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 11bp_to_BT007323_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | P21810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extracellular matrix secreting cell | 7.02e-16 | 15 |
stromal cell | 1.07e-10 | 28 |
chondroblast | 4.97e-10 | 6 |
chondrocyte | 4.97e-10 | 6 |
fibroblast | 1.29e-09 | 76 |
GAG secreting cell | 5.94e-09 | 9 |
carbohydrate secreting cell | 5.94e-09 | 9 |
cardiac fibroblast | 8.00e-09 | 6 |
cardiocyte | 6.36e-07 | 16 |
leptomeningeal cell | 8.26e-07 | 3 |
receptor cell | 9.05e-07 | 6 |
sensory epithelial cell | 9.05e-07 | 6 |
olfactory epithelial cell | 9.05e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 2.97e-11 | 83 |
systemic artery | 5.65e-11 | 33 |
systemic arterial system | 5.65e-11 | 33 |
epithelial tube | 9.79e-11 | 117 |
artery | 3.05e-10 | 42 |
arterial blood vessel | 3.05e-10 | 42 |
arterial system | 3.05e-10 | 42 |
primary circulatory organ | 5.49e-10 | 27 |
heart | 7.41e-10 | 24 |
primitive heart tube | 7.41e-10 | 24 |
primary heart field | 7.41e-10 | 24 |
anterior lateral plate mesoderm | 7.41e-10 | 24 |
heart tube | 7.41e-10 | 24 |
heart primordium | 7.41e-10 | 24 |
cardiac mesoderm | 7.41e-10 | 24 |
cardiogenic plate | 7.41e-10 | 24 |
heart rudiment | 7.41e-10 | 24 |
circulatory system | 8.93e-10 | 112 |
cardiovascular system | 1.98e-09 | 109 |
epithelial tube open at both ends | 3.14e-09 | 59 |
blood vessel | 3.14e-09 | 59 |
blood vasculature | 3.14e-09 | 59 |
vascular cord | 3.14e-09 | 59 |
vasculature | 1.97e-08 | 78 |
vascular system | 1.97e-08 | 78 |
vessel | 2.61e-08 | 68 |
blood vessel layer | 7.09e-08 | 7 |
blood-cerebrospinal fluid barrier | 8.26e-07 | 3 |
aorta | 8.59e-07 | 21 |
aortic system | 8.59e-07 | 21 |