FFCP PHASE1:Hg19::chrX:17755563..17755618,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6322 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10580 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UN30 | |||
|association_with_transcript=0bp_to_ENST00000380041,ENST00000380043,ENST00000380045,ENST00000398080,NM_001037535,NM_001037536,NM_001037540,NM_006746,uc004cyb.2,uc004cyc.2,uc004cyd.2,uc004cye.2_5end | |||
|description=CAGE_peak_1_at_SCML1_5end | |||
|id=chrX:17755563..17755618,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!9.38e-10!155;UBERON:0001555!9.38e-10!155;UBERON:0007026!9.38e-10!155;UBERON:0004921!4.56e-08!129;UBERON:0004185!4.56e-08!129;UBERON:0004119!1.17e-07!169;UBERON:0000925!1.17e-07!169;UBERON:0006595!1.17e-07!169;UBERON:0000062!1.86e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.36e-14,223;UBERON:0001007,3.27e-11,145;UBERON:0001555,3.27e-11,145;UBERON:0007026,3.27e-11,145;UBERON:0004921,1.68e-09,118;UBERON:0004119,9.45e-09,160;UBERON:0000925,9.45e-09,160;UBERON:0006595,9.45e-09,160 | |||
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| |||
|short_description=p1@SCML1 | |||
}} |
Revision as of 04:59, 23 January 2014
Short description: | p1@SCML1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCML1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000380041, ENST00000380043, ENST00000380045, ENST00000398080, NM_001037535, NM_001037536, NM_001037540, NM_006746, uc004cyb.2, uc004cyc.2, uc004cyd.2, uc004cye.2_5end |
EntrezGene: | SCML1 |
HGNC: | 10580 |
UniProt: | Q9UN30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.36e-14 | 223 |
digestive system | 3.27e-11 | 145 |
digestive tract | 3.27e-11 | 145 |
primitive gut | 3.27e-11 | 145 |
subdivision of digestive tract | 1.68e-09 | 118 |
endoderm-derived structure | 9.45e-09 | 160 |
endoderm | 9.45e-09 | 160 |
presumptive endoderm | 9.45e-09 | 160 |