FFCP PHASE1:Mm9::chr7:129210857..129210888,+: Difference between revisions
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{{FFCP|EntrezGene=28018|HGNC=|MCL_coexpression_id=24|UniProt=E9QB07|association_with_transcript=-47bp_to_ENSMUST00000170688_5end|description=CAGE_peak_3_at_Ubfd1_5end|id=chr7:129210857..129210888,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.07e-14!43;UBERON:0005409!1.23e-10!59;UBERON:0004119!1.37e-08!130;UBERON:0000925!1.37e-08!130;UBERON:0006595!1.37e-08!130;UBERON:0001007!7.46e-08!128;UBERON:0001555!7.46e-08!128;UBERON:0007026!7.46e-08!128;UBERON:0004921!3.69e-07!126;UBERON:0004185!3.69e-07!126;UBERON:0000344!3.98e-07!15;UBERON:0002108!9.01e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.41e-10,31;UBERON:0000344,2.64e-07,15;UBERON:0005409,5.21e-07,47|phase1_expression=1.44133962394315,18.4956966048861,14.1049764210756,12.40103266358,26.0465779572101,9.06548068324205,5.37309073369709,1.80772652818207,0.422366166455,0.468129052643987,1.71217968225505,1.83475965689274,1.71200729931206,1.48614684112296,0,0.809901069559304,0,0.630924330716475,0.411343300817216,0.42438965179803,2.12608225377674,0.297872853602656,1.56719873483361,5.43974237497583,7.11168771308227,11.4846392823004,13.7843838770904,13.3592164265251,5.13063232532209,5.79669298447841,2.88249663851896,2.54012269383853,0.61506478758457,0,1.44425809875637,2.49351968037739,1.02084678131185,0,0.7813353445238,0,0,0,0.485510353031154,1.1330713617802,1.4192770370732,2.38610777810186,0.782391344348039,1.09012578190223,1.75748946187577,1.74986909166855,1.1198913730029,1.43752564364972,0.503347818173209,1.45072428402269,0,2.31533492432352,1.14613375975503,1.54701627683233,2.02316460859598,1.5869729378161,1.90149421051854,3.38844532069132,5.33576877666684,3.5995988691256,1.97773272513395,4.2628806896766,1.19840044207362,3.45796474789399,1.97010263386108,0.945041568321835,0.630974884054146,3.14216082844184,1.10434270475807,1.83736198822431,1.24599112323707,0,1.10115880999389,1.27687338085188,1.53606533256243,2.37395317914349,1.37231465403614,0,2.23346399201105,2.25105044012672,1.06958773443767,1.17851434189467,1.99320353118744,1.3047961207771,2.19605960666234,1.058001841495,2.6087803983151,4.30211938490693,2.719885334831,9.17495425784289,5.84798775702902,4.92829575807069,2.10666630197628,0,1.55871602761721,0.35333957451034,0.704217098883403,0,0,0,2.16491041011214,3.80039798212648,3.0331466700887,2.96878087269556,1.03575153458869,0.445326417194474,2.60227990149204,1.52232739156071,1.61430848079241,1.3565037649736,0.940709657085638,1.88499886994513,4.94389935468748,1.15679485535929,0,2.26473589926373,1.32504911076236,0.969750506270444,0,0.585561594023094,0.209446706813455,7.15279754584056,0.599075622529601,0,0.254140454146129,1.49790639404823,1.37250180845588,2.01046963380583,0.347648640384553,0.511430914660661,0.41557608911912,1.1356888414743,1.83310854930569,0.746441823660558,1.26361379216837,0.841767423545896,1.30120442962704,1.14951052216736,1.62055916824814,0.753524089178575,0.748401490664606,1.2811372028485,0.468508622798644,0.258703370739016,0.862271971731369,0.378212160335639,1.58356011747554,1.53437012699302,0.834141747676794,1.0447564995665,1.64625709126355,1.19420560091096,0,0.257347907114715,0.568326998791185,1.65700618028402,0.938104239924385,1.08037236876609,1.89395788468168,0.983821158737019,2.46827380619805,1.16266972375204,1.07309360559848,0.700592054203017,1.6455984991348,0.820837320395476,0.810688095458557,1.31579988682799,1.09775057645525,0.268412837520744,0.630869845692382,0.514523061896422,6.27795687669216,7.1401652999157,1.70630600428187,0.696710015581316,1.03093969057675,4.03367049246685,3.55804870151792,4.37518940058886,8.54152310780121,3.29397909448022,3.01602250560323,4.17808591286417,4.09424582950152,7.19055526923377,7.5648317456143,4.97853183135918,1.89667900953082,1.37098215131675,0,1.22190796707189,0.775809948670503,0.911765658574141,1.45444035385792,2.21415221969403,2.511979645462,1.60416313098341,4.74324203339438,1.00107063429656,0.786235980452812,0.899448449539415,0.608580364165509,0.72353147925725,1.01850340712568,0.863088412352432,0.486405680325106,4.11842119782122,4.31304619582064,0.744281895337007,4.36852742360385,4.04126204715379,6.63770430031075,1.4473305640901,1.66277871149944,2.84237117655727,1.46668478797823,1.52770577197669,1.64283173801951,1.50755631697634,0.952174563544055,1.36593553500459,1.41871629695572,1.7717175171902,1.75400245523236,0.81931657357869,1.72684981865896,0.433947175744535,0,0.54390568381871,11.3105782794378,5.24279817978992,0.80275294993896,0.937693492737625,1.47541450839008,0.252470927204373,0.94652465824877,0,0.646270193198397,0.238968797952552,1.11399337041197,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,0,1.41940085208269,1.95872164033981,1.14020871547503,1.15479086080775,10.619611067197,2.18502572539483,2.11626489875326,3.01768127609437,6.79194353625777,3.99665692327106,2.06742634534577,1.81766864738753,1.42598951353889,7.9009189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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:28018 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QB07 | |||
|association_with_transcript=-47bp_to_ENSMUST00000170688_5end | |||
|cluster_id=chr7:129210857..129210888,+ | |||
|description=CAGE_peak_3_at_Ubfd1_5end | |||
|id=chr7:129210857..129210888,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.07e-14!43;UBERON:0005409!1.23e-10!59;UBERON:0004119!1.37e-08!130;UBERON:0000925!1.37e-08!130;UBERON:0006595!1.37e-08!130;UBERON:0001007!7.46e-08!128;UBERON:0001555!7.46e-08!128;UBERON:0007026!7.46e-08!128;UBERON:0004921!3.69e-07!126;UBERON:0004185!3.69e-07!126;UBERON:0000344!3.98e-07!15;UBERON:0002108!9.01e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.41e-10,31;UBERON:0000344,2.64e-07,15;UBERON:0005409,5.21e-07,47 | |||
|phase1_expression=1.44133962394315,18.4956966048861,14.1049764210756,12.40103266358,26.0465779572101,9.06548068324205,5.37309073369709,1.80772652818207,0.422366166455,0.468129052643987,1.71217968225505,1.83475965689274,1.71200729931206,1.48614684112296,0,0.809901069559304,0,0.630924330716475,0.411343300817216,0.42438965179803,2.12608225377674,0.297872853602656,1.56719873483361,5.43974237497583,7.11168771308227,11.4846392823004,13.7843838770904,13.3592164265251,5.13063232532209,5.79669298447841,2.88249663851896,2.54012269383853,0.61506478758457,0,1.44425809875637,2.49351968037739,1.02084678131185,0,0.7813353445238,0,0,0,0.485510353031154,1.1330713617802,1.4192770370732,2.38610777810186,0.782391344348039,1.09012578190223,1.75748946187577,1.74986909166855,1.1198913730029,1.43752564364972,0.503347818173209,1.45072428402269,0,2.31533492432352,1.14613375975503,1.54701627683233,2.02316460859598,1.5869729378161,1.90149421051854,3.38844532069132,5.33576877666684,3.5995988691256,1.97773272513395,4.2628806896766,1.19840044207362,3.45796474789399,1.97010263386108,0.945041568321835,0.630974884054146,3.14216082844184,1.10434270475807,1.83736198822431,1.24599112323707,0,1.10115880999389,1.27687338085188,1.53606533256243,2.37395317914349,1.37231465403614,0,2.23346399201105,2.25105044012672,1.06958773443767,1.17851434189467,1.99320353118744,1.3047961207771,2.19605960666234,1.058001841495,2.6087803983151,4.30211938490693,2.719885334831,9.17495425784289,5.84798775702902,4.92829575807069,2.10666630197628,0,1.55871602761721,0.35333957451034,0.704217098883403,0,0,0,2.16491041011214,3.80039798212648,3.0331466700887,2.96878087269556,1.03575153458869,0.445326417194474,2.60227990149204,1.52232739156071,1.61430848079241,1.3565037649736,0.940709657085638,1.88499886994513,4.94389935468748,1.15679485535929,0,2.26473589926373,1.32504911076236,0.969750506270444,0,0.585561594023094,0.209446706813455,7.15279754584056,0.599075622529601,0,0.254140454146129,1.49790639404823,1.37250180845588,2.01046963380583,0.347648640384553,0.511430914660661,0.41557608911912,1.1356888414743,1.83310854930569,0.746441823660558,1.26361379216837,0.841767423545896,1.30120442962704,1.14951052216736,1.62055916824814,0.753524089178575,0.748401490664606,1.2811372028485,0.468508622798644,0.258703370739016,0.862271971731369,0.378212160335639,1.58356011747554,1.53437012699302,0.834141747676794,1.0447564995665,1.64625709126355,1.19420560091096,0,0.257347907114715,0.568326998791185,1.65700618028402,0.938104239924385,1.08037236876609,1.89395788468168,0.983821158737019,2.46827380619805,1.16266972375204,1.07309360559848,0.700592054203017,1.6455984991348,0.820837320395476,0.810688095458557,1.31579988682799,1.09775057645525,0.268412837520744,0.630869845692382,0.514523061896422,6.27795687669216,7.1401652999157,1.70630600428187,0.696710015581316,1.03093969057675,4.03367049246685,3.55804870151792,4.37518940058886,8.54152310780121,3.29397909448022,3.01602250560323,4.17808591286417,4.09424582950152,7.19055526923377,7.5648317456143,4.97853183135918,1.89667900953082,1.37098215131675,0,1.22190796707189,0.775809948670503,0.911765658574141,1.45444035385792,2.21415221969403,2.511979645462,1.60416313098341,4.74324203339438,1.00107063429656,0.786235980452812,0.899448449539415,0.608580364165509,0.72353147925725,1.01850340712568,0.863088412352432,0.486405680325106,4.11842119782122,4.31304619582064,0.744281895337007,4.36852742360385,4.04126204715379,6.63770430031075,1.4473305640901,1.66277871149944,2.84237117655727,1.46668478797823,1.52770577197669,1.64283173801951,1.50755631697634,0.952174563544055,1.36593553500459,1.41871629695572,1.7717175171902,1.75400245523236,0.81931657357869,1.72684981865896,0.433947175744535,0,0.54390568381871,11.3105782794378,5.24279817978992,0.80275294993896,0.937693492737625,1.47541450839008,0.252470927204373,0.94652465824877,0,0.646270193198397,0.238968797952552,1.11399337041197,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,0,1.41940085208269,1.95872164033981,1.14020871547503,1.15479086080775,10.619611067197,2.18502572539483,2.11626489875326,3.01768127609437,6.79194353625777,3.99665692327106,2.06742634534577,1.81766864738753,1.42598951353889,7.9009189483954,22.1379078007497,12.3762651897824,2.7235168460303,1.08036656418786,1.16422815404479,1.28602221018955,2.12808280370728,1.78368817602071,1.97458824722545,0.913394847343798,6.10146440965647,6.77862626764225,4.19003956304428,2.30840754118072,1.13025098687134,1.5078231232039,1.90995750405018,2.62625439592098,3.78925087618806,1.29797711407357,0.512612642393558,0.619160603889667,0.925972636848558,0.188368457004691,0.683471138605126,1.14389086603261,0.339956859987711,0.139951452323658,0.414599921413271,0.954670618015114,1.89801596148681,1.62655573701479,2.48412283890143,1.25452977608681,2.62035076495413,1.34864346384821,2.23164330458407,3.92633912976044,2.98114438571124,8.07741107013003,6.76431526421028,3.13984746692355,3.14371131868485,1.75006069509643,2.45403664607689,1.520605129417,0.938857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| |||
|short_description=p3@Ubfd1 | |||
}} |
Revision as of 03:56, 4 August 2015
Short description: | p3@Ubfd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ubfd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -47bp_to_ENSMUST00000170688_5end |
EntrezGene: | 28018 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.41e-10 | 31 |
mucosa | 2.64e-07 | 15 |
gastrointestinal system | 5.21e-07 | 47 |