FFCP PHASE1:Mm9::chr8:73058170..73058188,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1573|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:73058170..73058188,+|id=chr8:73058170..73058188,+|ontology_enrichment_celltype=CL:0000473!2.54e-12!3;CL:0000627!2.54e-12!3;CL:0000682!2.54e-12!3;CL:0000239!2.27e-10!6;CL:0000677!2.27e-10!6;CL:0000212!2.27e-10!6;CL:0000584!2.27e-10!6;CL:0000075!6.66e-09!7;CL:0002563!6.13e-07!9;CL:0002251!6.13e-07!9|ontology_enrichment_celltype_v019_2=CL:0000682,5.88e-24,3;CL:0000473,1.17e-10,7;CL:0000066,6.47e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.82e-20!15;UBERON:0004923!1.14e-14!24;UBERON:0001242!6.35e-14!13;UBERON:0000060!6.35e-14!13;UBERON:0001262!6.35e-14!13;UBERON:0004786!6.35e-14!13;UBERON:0000331!1.05e-12!3;UBERON:0002116!1.05e-12!3;UBERON:0001204!1.05e-12!3;UBERON:0001168!1.05e-12!3;UBERON:0000014!1.59e-11!5;UBERON:0001003!1.59e-11!5;UBERON:0002097!1.59e-11!5;UBERON:0002199!1.59e-11!5;UBERON:0007029!1.59e-11!5;UBERON:0007376!1.59e-11!5;UBERON:0002416!1.59e-11!5;UBERON:0007383!1.59e-11!5;UBERON:0001962!3.35e-09!2;UBERON:0001961!3.35e-09!2;UBERON:0001744!3.35e-09!2;UBERON:0003350!6.13e-07!9;UBERON:0004808!6.13e-07!9;UBERON:0001277!6.13e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.97e-19,15;UBERON:0001962,1.87e-17,2;UBERON:0001961,1.87e-17,2;UBERON:0001744,1.87e-17,2;UBERON:0004923,4.24e-12,24;UBERON:0000331,4.51e-12,3;UBERON:0002116,4.51e-12,3;UBERON:0001204,4.51e-12,3;UBERON:0001168,4.51e-12,3;UBERON:0002465,5.78e-12,3;UBERON:0001242,2.47e-10,13;UBERON:0001262,2.47e-10,13;UBERON:0004786,2.47e-10,13;UBERON:0003199,1.19e-09,1;UBERON:0002108,2.78e-09,4|phase1_expression=0,1.39590163055744,1.81999695755814,0.30246421130683,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,6.19405058881359,1.14846392823004,1.29228598847722,2.58565479223067,3.99049180858385,0.504060259519861,9.09095093686749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39300866608867,1.64625709126355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:73058170..73058188,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1573 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:73058170..73058188,+ | |||
|description=CAGE_peak_at_chr8:73058170..73058188,+ | |||
|id=chr8:73058170..73058188,+ | |||
|ontology_enrichment_celltype=CL:0000473!2.54e-12!3;CL:0000627!2.54e-12!3;CL:0000682!2.54e-12!3;CL:0000239!2.27e-10!6;CL:0000677!2.27e-10!6;CL:0000212!2.27e-10!6;CL:0000584!2.27e-10!6;CL:0000075!6.66e-09!7;CL:0002563!6.13e-07!9;CL:0002251!6.13e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,5.88e-24,3;CL:0000473,1.17e-10,7;CL:0000066,6.47e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.82e-20!15;UBERON:0004923!1.14e-14!24;UBERON:0001242!6.35e-14!13;UBERON:0000060!6.35e-14!13;UBERON:0001262!6.35e-14!13;UBERON:0004786!6.35e-14!13;UBERON:0000331!1.05e-12!3;UBERON:0002116!1.05e-12!3;UBERON:0001204!1.05e-12!3;UBERON:0001168!1.05e-12!3;UBERON:0000014!1.59e-11!5;UBERON:0001003!1.59e-11!5;UBERON:0002097!1.59e-11!5;UBERON:0002199!1.59e-11!5;UBERON:0007029!1.59e-11!5;UBERON:0007376!1.59e-11!5;UBERON:0002416!1.59e-11!5;UBERON:0007383!1.59e-11!5;UBERON:0001962!3.35e-09!2;UBERON:0001961!3.35e-09!2;UBERON:0001744!3.35e-09!2;UBERON:0003350!6.13e-07!9;UBERON:0004808!6.13e-07!9;UBERON:0001277!6.13e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.97e-19,15;UBERON:0001962,1.87e-17,2;UBERON:0001961,1.87e-17,2;UBERON:0001744,1.87e-17,2;UBERON:0004923,4.24e-12,24;UBERON:0000331,4.51e-12,3;UBERON:0002116,4.51e-12,3;UBERON:0001204,4.51e-12,3;UBERON:0001168,4.51e-12,3;UBERON:0002465,5.78e-12,3;UBERON:0001242,2.47e-10,13;UBERON:0001262,2.47e-10,13;UBERON:0004786,2.47e-10,13;UBERON:0003199,1.19e-09,1;UBERON:0002108,2.78e-09,4 | |||
|phase1_expression=0,1.39590163055744,1.81999695755814,0.30246421130683,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,6.19405058881359,1.14846392823004,1.29228598847722,2.58565479223067,3.99049180858385,0.504060259519861,9.09095093686749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39300866608867,1.64625709126355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:73058170..73058188,+ | |||
}} |
Latest revision as of 01:00, 4 August 2015
Short description: | p@chr8:73058170..73058188, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:73058170..73058188, + |
Coexpression cluster: | MCL_coexpression_mm9:1573 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 5.88e-24 | 3 |
defensive cell | 1.17e-10 | 7 |
epithelial cell | 6.47e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.97e-19 | 15 |
gut-associated lymphoid tissue | 1.87e-17 | 2 |
mucosa-associated lymphoid tissue | 1.87e-17 | 2 |
lymphoid tissue | 1.87e-17 | 2 |
organ component layer | 4.24e-12 | 24 |
ileal mucosa | 4.51e-12 | 3 |
ileum | 4.51e-12 | 3 |
mucosa of small intestine | 4.51e-12 | 3 |
wall of small intestine | 4.51e-12 | 3 |
lymphoid system | 5.78e-12 | 3 |
intestinal mucosa | 2.47e-10 | 13 |
wall of intestine | 2.47e-10 | 13 |
gastrointestinal system mucosa | 2.47e-10 | 13 |
egg chamber | 1.19e-09 | 1 |
small intestine | 2.78e-09 | 4 |